Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17075 and IAI46_17080 are separated by 11 nucleotides IAI46_17080 and IAI46_17085 are separated by 230 nucleotides
IAI46_17075: IAI46_17075 - high-affinity branched-chain amino acid ABC transporter permease LivM, at 3,581,283 to 3,582,569
_17075
IAI46_17080: IAI46_17080 - branched-chain amino acid ABC transporter permease LivH, at 3,582,581 to 3,583,495
_17080
IAI46_17085: IAI46_17085 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,583,726 to 3,584,844
_17085
Position (kb)
3582
3583
3584 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3581.600 kb on + strand, within IAI46_17075 at 3581.601 kb on - strand, within IAI46_17075 at 3581.632 kb on - strand, within IAI46_17075 at 3581.720 kb on - strand, within IAI46_17075 at 3581.720 kb on - strand, within IAI46_17075 at 3581.720 kb on - strand, within IAI46_17075 at 3581.720 kb on - strand, within IAI46_17075 at 3581.720 kb on - strand, within IAI46_17075 at 3581.755 kb on + strand, within IAI46_17075 at 3581.756 kb on - strand, within IAI46_17075 at 3581.756 kb on - strand, within IAI46_17075 at 3581.756 kb on - strand, within IAI46_17075 at 3581.760 kb on - strand, within IAI46_17075 at 3581.765 kb on + strand, within IAI46_17075 at 3581.786 kb on - strand, within IAI46_17075 at 3581.965 kb on + strand, within IAI46_17075 at 3581.978 kb on + strand, within IAI46_17075 at 3582.073 kb on + strand, within IAI46_17075 at 3582.091 kb on + strand, within IAI46_17075 at 3582.106 kb on + strand, within IAI46_17075 at 3582.106 kb on + strand, within IAI46_17075 at 3582.182 kb on - strand, within IAI46_17075 at 3582.182 kb on - strand, within IAI46_17075 at 3582.182 kb on - strand, within IAI46_17075 at 3582.195 kb on + strand, within IAI46_17075 at 3582.214 kb on + strand, within IAI46_17075 at 3582.214 kb on + strand, within IAI46_17075 at 3582.215 kb on - strand, within IAI46_17075 at 3582.215 kb on - strand, within IAI46_17075 at 3582.215 kb on - strand, within IAI46_17075 at 3582.266 kb on + strand, within IAI46_17075 at 3582.266 kb on + strand, within IAI46_17075 at 3582.307 kb on + strand, within IAI46_17075 at 3582.307 kb on + strand, within IAI46_17075 at 3582.381 kb on + strand, within IAI46_17075 at 3582.403 kb on - strand, within IAI46_17075 at 3582.511 kb on - strand at 3582.756 kb on - strand, within IAI46_17080 at 3582.756 kb on - strand, within IAI46_17080 at 3582.756 kb on - strand, within IAI46_17080 at 3582.800 kb on - strand, within IAI46_17080 at 3582.829 kb on - strand, within IAI46_17080 at 3582.901 kb on + strand, within IAI46_17080 at 3582.990 kb on + strand, within IAI46_17080 at 3582.990 kb on + strand, within IAI46_17080 at 3582.991 kb on - strand, within IAI46_17080 at 3582.991 kb on - strand, within IAI46_17080 at 3582.991 kb on - strand, within IAI46_17080 at 3582.991 kb on - strand, within IAI46_17080 at 3583.044 kb on + strand, within IAI46_17080 at 3583.143 kb on + strand, within IAI46_17080 at 3583.218 kb on + strand, within IAI46_17080 at 3583.219 kb on - strand, within IAI46_17080 at 3583.225 kb on + strand, within IAI46_17080 at 3583.225 kb on + strand, within IAI46_17080 at 3583.267 kb on + strand, within IAI46_17080 at 3583.350 kb on + strand, within IAI46_17080 at 3583.363 kb on + strand, within IAI46_17080 at 3583.363 kb on + strand, within IAI46_17080 at 3583.363 kb on + strand, within IAI46_17080 at 3583.364 kb on - strand, within IAI46_17080 at 3583.364 kb on - strand, within IAI46_17080 at 3583.364 kb on - strand, within IAI46_17080 at 3583.365 kb on + strand, within IAI46_17080 at 3583.365 kb on + strand, within IAI46_17080 at 3583.366 kb on - strand, within IAI46_17080 at 3583.366 kb on - strand, within IAI46_17080 at 3583.366 kb on - strand, within IAI46_17080 at 3583.366 kb on - strand, within IAI46_17080 at 3583.366 kb on - strand, within IAI46_17080 at 3583.366 kb on - strand, within IAI46_17080 at 3583.420 kb on - strand at 3583.441 kb on - strand at 3583.634 kb on + strand at 3583.635 kb on - strand at 3583.654 kb on + strand at 3583.654 kb on + strand at 3583.655 kb on - strand at 3583.655 kb on - strand at 3583.655 kb on - strand at 3583.663 kb on + strand at 3583.727 kb on + strand at 3583.727 kb on + strand at 3583.727 kb on + strand at 3583.740 kb on - strand at 3583.763 kb on + strand at 3583.937 kb on + strand, within IAI46_17085 at 3583.938 kb on - strand, within IAI46_17085 at 3583.938 kb on - strand, within IAI46_17085 at 3584.252 kb on + strand, within IAI46_17085 at 3584.252 kb on + strand, within IAI46_17085 at 3584.253 kb on - strand, within IAI46_17085 at 3584.253 kb on - strand, within IAI46_17085 at 3584.318 kb on + strand, within IAI46_17085 at 3584.319 kb on - strand, within IAI46_17085 at 3584.375 kb on + strand, within IAI46_17085 at 3584.375 kb on + strand, within IAI46_17085 at 3584.375 kb on + strand, within IAI46_17085 at 3584.376 kb on - strand, within IAI46_17085 at 3584.376 kb on - strand, within IAI46_17085 at 3584.485 kb on - strand, within IAI46_17085
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,581,600 + IAI46_17075 0.25 -0.6 3,581,601 - IAI46_17075 0.25 +0.2 3,581,632 - IAI46_17075 0.27 +1.3 3,581,720 - IAI46_17075 0.34 +0.5 3,581,720 - IAI46_17075 0.34 +0.7 3,581,720 - IAI46_17075 0.34 +0.2 3,581,720 - IAI46_17075 0.34 +0.5 3,581,720 - IAI46_17075 0.34 -0.5 3,581,755 + IAI46_17075 0.37 -0.5 3,581,756 - IAI46_17075 0.37 +0.2 3,581,756 - IAI46_17075 0.37 -0.7 3,581,756 - IAI46_17075 0.37 +0.3 3,581,760 - IAI46_17075 0.37 -0.0 3,581,765 + IAI46_17075 0.37 +0.4 3,581,786 - IAI46_17075 0.39 +0.7 3,581,965 + IAI46_17075 0.53 -0.1 3,581,978 + IAI46_17075 0.54 -0.9 3,582,073 + IAI46_17075 0.61 -0.3 3,582,091 + IAI46_17075 0.63 +0.5 3,582,106 + IAI46_17075 0.64 +0.8 3,582,106 + IAI46_17075 0.64 +0.7 3,582,182 - IAI46_17075 0.70 +0.3 3,582,182 - IAI46_17075 0.70 +0.7 3,582,182 - IAI46_17075 0.70 -1.6 3,582,195 + IAI46_17075 0.71 +1.3 3,582,214 + IAI46_17075 0.72 -0.2 3,582,214 + IAI46_17075 0.72 +0.1 3,582,215 - IAI46_17075 0.72 +0.1 3,582,215 - IAI46_17075 0.72 +0.1 3,582,215 - IAI46_17075 0.72 +0.5 3,582,266 + IAI46_17075 0.76 +2.0 3,582,266 + IAI46_17075 0.76 -0.1 3,582,307 + IAI46_17075 0.80 +0.1 3,582,307 + IAI46_17075 0.80 -0.7 3,582,381 + IAI46_17075 0.85 +0.6 3,582,403 - IAI46_17075 0.87 +0.7 3,582,511 - -0.1 3,582,756 - IAI46_17080 0.19 -1.4 3,582,756 - IAI46_17080 0.19 +0.0 3,582,756 - IAI46_17080 0.19 +0.5 3,582,800 - IAI46_17080 0.24 +0.5 3,582,829 - IAI46_17080 0.27 -0.0 3,582,901 + IAI46_17080 0.35 -0.5 3,582,990 + IAI46_17080 0.45 -0.2 3,582,990 + IAI46_17080 0.45 +0.4 3,582,991 - IAI46_17080 0.45 -0.6 3,582,991 - IAI46_17080 0.45 +0.1 3,582,991 - IAI46_17080 0.45 -1.5 3,582,991 - IAI46_17080 0.45 -0.4 3,583,044 + IAI46_17080 0.51 +0.8 3,583,143 + IAI46_17080 0.61 +0.8 3,583,218 + IAI46_17080 0.70 -0.2 3,583,219 - IAI46_17080 0.70 +0.9 3,583,225 + IAI46_17080 0.70 +1.0 3,583,225 + IAI46_17080 0.70 +0.5 3,583,267 + IAI46_17080 0.75 -0.1 3,583,350 + IAI46_17080 0.84 -0.4 3,583,363 + IAI46_17080 0.85 +0.7 3,583,363 + IAI46_17080 0.85 -0.6 3,583,363 + IAI46_17080 0.85 -0.3 3,583,364 - IAI46_17080 0.86 -0.3 3,583,364 - IAI46_17080 0.86 +0.3 3,583,364 - IAI46_17080 0.86 -0.1 3,583,365 + IAI46_17080 0.86 +2.9 3,583,365 + IAI46_17080 0.86 -0.0 3,583,366 - IAI46_17080 0.86 +0.0 3,583,366 - IAI46_17080 0.86 +1.1 3,583,366 - IAI46_17080 0.86 +1.2 3,583,366 - IAI46_17080 0.86 -0.3 3,583,366 - IAI46_17080 0.86 +0.5 3,583,366 - IAI46_17080 0.86 -0.7 3,583,420 - -0.7 3,583,441 - +0.7 3,583,634 + -0.3 3,583,635 - +0.0 3,583,654 + -1.2 3,583,654 + +0.2 3,583,655 - -0.1 3,583,655 - -0.3 3,583,655 - -0.8 3,583,663 + +0.7 3,583,727 + +0.7 3,583,727 + +0.1 3,583,727 + +0.7 3,583,740 - -0.7 3,583,763 + -0.5 3,583,937 + IAI46_17085 0.19 +0.1 3,583,938 - IAI46_17085 0.19 +0.6 3,583,938 - IAI46_17085 0.19 +0.4 3,584,252 + IAI46_17085 0.47 +0.1 3,584,252 + IAI46_17085 0.47 +0.4 3,584,253 - IAI46_17085 0.47 -0.7 3,584,253 - IAI46_17085 0.47 -0.0 3,584,318 + IAI46_17085 0.53 +0.7 3,584,319 - IAI46_17085 0.53 +1.3 3,584,375 + IAI46_17085 0.58 +0.6 3,584,375 + IAI46_17085 0.58 -1.0 3,584,375 + IAI46_17085 0.58 +0.3 3,584,376 - IAI46_17085 0.58 +0.9 3,584,376 - IAI46_17085 0.58 +0.1 3,584,485 - IAI46_17085 0.68 +0.6
Or see this region's nucleotide sequence