Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16500 and IAI46_16505 are separated by 200 nucleotides IAI46_16505 and IAI46_16510 are separated by 3 nucleotides
IAI46_16500: IAI46_16500 - alpha-glucosidase/alpha-galactosidase, at 3,456,404 to 3,457,711
_16500
IAI46_16505: IAI46_16505 - AraC family transcriptional regulator, at 3,457,912 to 3,458,769
_16505
IAI46_16510: IAI46_16510 - EmmdR/YeeO family multidrug/toxin efflux MATE transporter, at 3,458,773 to 3,460,236
_16510
Position (kb)
3457
3458
3459 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3456.922 kb on + strand, within IAI46_16500 at 3456.939 kb on + strand, within IAI46_16500 at 3456.950 kb on - strand, within IAI46_16500 at 3456.950 kb on - strand, within IAI46_16500 at 3456.972 kb on + strand, within IAI46_16500 at 3456.972 kb on + strand, within IAI46_16500 at 3456.972 kb on + strand, within IAI46_16500 at 3456.972 kb on + strand, within IAI46_16500 at 3457.004 kb on + strand, within IAI46_16500 at 3457.196 kb on + strand, within IAI46_16500 at 3457.196 kb on + strand, within IAI46_16500 at 3457.197 kb on - strand, within IAI46_16500 at 3457.263 kb on + strand, within IAI46_16500 at 3457.264 kb on - strand, within IAI46_16500 at 3457.334 kb on - strand, within IAI46_16500 at 3457.467 kb on + strand, within IAI46_16500 at 3457.468 kb on - strand, within IAI46_16500 at 3457.468 kb on - strand, within IAI46_16500 at 3457.512 kb on + strand, within IAI46_16500 at 3457.513 kb on - strand, within IAI46_16500 at 3457.543 kb on + strand, within IAI46_16500 at 3457.556 kb on - strand, within IAI46_16500 at 3457.556 kb on - strand, within IAI46_16500 at 3457.605 kb on + strand at 3457.694 kb on - strand at 3457.705 kb on + strand at 3457.706 kb on - strand at 3457.715 kb on - strand at 3457.741 kb on - strand at 3457.775 kb on - strand at 3457.775 kb on - strand at 3457.781 kb on - strand at 3457.873 kb on - strand at 3457.880 kb on + strand at 3457.881 kb on - strand at 3457.881 kb on - strand at 3457.917 kb on + strand at 3457.918 kb on - strand at 3457.926 kb on + strand at 3457.927 kb on - strand at 3458.027 kb on - strand, within IAI46_16505 at 3458.027 kb on - strand, within IAI46_16505 at 3458.030 kb on + strand, within IAI46_16505 at 3458.038 kb on + strand, within IAI46_16505 at 3458.133 kb on + strand, within IAI46_16505 at 3458.133 kb on + strand, within IAI46_16505 at 3458.134 kb on - strand, within IAI46_16505 at 3458.134 kb on - strand, within IAI46_16505 at 3458.138 kb on - strand, within IAI46_16505 at 3458.167 kb on + strand, within IAI46_16505 at 3458.167 kb on + strand, within IAI46_16505 at 3458.168 kb on - strand, within IAI46_16505 at 3458.168 kb on - strand, within IAI46_16505 at 3458.168 kb on - strand, within IAI46_16505 at 3458.170 kb on - strand, within IAI46_16505 at 3458.170 kb on - strand, within IAI46_16505 at 3458.170 kb on - strand, within IAI46_16505 at 3458.170 kb on - strand, within IAI46_16505 at 3458.170 kb on - strand, within IAI46_16505 at 3458.170 kb on - strand, within IAI46_16505 at 3458.246 kb on - strand, within IAI46_16505 at 3458.348 kb on - strand, within IAI46_16505 at 3458.456 kb on - strand, within IAI46_16505 at 3458.513 kb on - strand, within IAI46_16505 at 3458.539 kb on + strand, within IAI46_16505 at 3458.539 kb on + strand, within IAI46_16505 at 3458.540 kb on - strand, within IAI46_16505 at 3458.608 kb on - strand, within IAI46_16505 at 3458.648 kb on - strand, within IAI46_16505 at 3458.754 kb on - strand at 3458.775 kb on - strand at 3458.824 kb on + strand at 3458.862 kb on + strand at 3458.863 kb on - strand at 3458.956 kb on - strand, within IAI46_16510 at 3458.956 kb on - strand, within IAI46_16510 at 3458.956 kb on - strand, within IAI46_16510 at 3458.956 kb on - strand, within IAI46_16510 at 3459.075 kb on + strand, within IAI46_16510 at 3459.076 kb on - strand, within IAI46_16510 at 3459.106 kb on + strand, within IAI46_16510 at 3459.244 kb on + strand, within IAI46_16510 at 3459.245 kb on - strand, within IAI46_16510 at 3459.276 kb on + strand, within IAI46_16510 at 3459.441 kb on + strand, within IAI46_16510 at 3459.442 kb on - strand, within IAI46_16510 at 3459.445 kb on + strand, within IAI46_16510 at 3459.492 kb on - strand, within IAI46_16510 at 3459.542 kb on + strand, within IAI46_16510 at 3459.543 kb on - strand, within IAI46_16510 at 3459.641 kb on - strand, within IAI46_16510 at 3459.657 kb on + strand, within IAI46_16510 at 3459.666 kb on + strand, within IAI46_16510 at 3459.667 kb on - strand, within IAI46_16510
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,456,922 + IAI46_16500 0.40 -1.5 3,456,939 + IAI46_16500 0.41 +0.3 3,456,950 - IAI46_16500 0.42 +1.3 3,456,950 - IAI46_16500 0.42 +1.6 3,456,972 + IAI46_16500 0.43 +0.6 3,456,972 + IAI46_16500 0.43 +0.8 3,456,972 + IAI46_16500 0.43 +0.9 3,456,972 + IAI46_16500 0.43 +0.1 3,457,004 + IAI46_16500 0.46 -0.4 3,457,196 + IAI46_16500 0.61 -0.1 3,457,196 + IAI46_16500 0.61 -0.7 3,457,197 - IAI46_16500 0.61 -0.6 3,457,263 + IAI46_16500 0.66 -0.4 3,457,264 - IAI46_16500 0.66 +0.9 3,457,334 - IAI46_16500 0.71 +0.4 3,457,467 + IAI46_16500 0.81 +0.7 3,457,468 - IAI46_16500 0.81 +0.2 3,457,468 - IAI46_16500 0.81 -0.9 3,457,512 + IAI46_16500 0.85 -1.3 3,457,513 - IAI46_16500 0.85 +0.6 3,457,543 + IAI46_16500 0.87 +0.3 3,457,556 - IAI46_16500 0.88 -0.5 3,457,556 - IAI46_16500 0.88 +1.3 3,457,605 + -0.9 3,457,694 - +0.1 3,457,705 + +1.2 3,457,706 - +0.7 3,457,715 - +0.7 3,457,741 - -0.5 3,457,775 - +1.0 3,457,775 - +0.4 3,457,781 - +0.7 3,457,873 - +0.3 3,457,880 + +0.4 3,457,881 - +0.2 3,457,881 - +0.0 3,457,917 + -0.1 3,457,918 - +0.8 3,457,926 + -0.1 3,457,927 - -0.4 3,458,027 - IAI46_16505 0.13 +0.0 3,458,027 - IAI46_16505 0.13 +0.3 3,458,030 + IAI46_16505 0.14 +0.8 3,458,038 + IAI46_16505 0.15 -1.5 3,458,133 + IAI46_16505 0.26 +0.9 3,458,133 + IAI46_16505 0.26 -0.2 3,458,134 - IAI46_16505 0.26 +0.6 3,458,134 - IAI46_16505 0.26 -0.0 3,458,138 - IAI46_16505 0.26 -0.1 3,458,167 + IAI46_16505 0.30 -0.5 3,458,167 + IAI46_16505 0.30 -0.5 3,458,168 - IAI46_16505 0.30 -0.3 3,458,168 - IAI46_16505 0.30 +0.6 3,458,168 - IAI46_16505 0.30 +0.5 3,458,170 - IAI46_16505 0.30 -2.0 3,458,170 - IAI46_16505 0.30 +0.7 3,458,170 - IAI46_16505 0.30 +0.3 3,458,170 - IAI46_16505 0.30 +1.3 3,458,170 - IAI46_16505 0.30 +1.3 3,458,170 - IAI46_16505 0.30 +1.2 3,458,246 - IAI46_16505 0.39 +0.4 3,458,348 - IAI46_16505 0.51 +1.1 3,458,456 - IAI46_16505 0.63 -0.1 3,458,513 - IAI46_16505 0.70 +0.4 3,458,539 + IAI46_16505 0.73 +0.6 3,458,539 + IAI46_16505 0.73 +0.1 3,458,540 - IAI46_16505 0.73 +0.6 3,458,608 - IAI46_16505 0.81 +1.9 3,458,648 - IAI46_16505 0.86 +0.5 3,458,754 - +0.2 3,458,775 - +0.3 3,458,824 + +2.0 3,458,862 + +1.0 3,458,863 - -0.4 3,458,956 - IAI46_16510 0.12 +1.6 3,458,956 - IAI46_16510 0.12 -0.3 3,458,956 - IAI46_16510 0.12 -0.5 3,458,956 - IAI46_16510 0.12 +0.1 3,459,075 + IAI46_16510 0.21 -0.4 3,459,076 - IAI46_16510 0.21 +0.4 3,459,106 + IAI46_16510 0.23 -1.2 3,459,244 + IAI46_16510 0.32 -0.8 3,459,245 - IAI46_16510 0.32 -1.3 3,459,276 + IAI46_16510 0.34 +2.1 3,459,441 + IAI46_16510 0.46 +1.3 3,459,442 - IAI46_16510 0.46 +0.2 3,459,445 + IAI46_16510 0.46 +1.4 3,459,492 - IAI46_16510 0.49 +1.1 3,459,542 + IAI46_16510 0.53 -0.7 3,459,543 - IAI46_16510 0.53 +0.8 3,459,641 - IAI46_16510 0.59 -0.5 3,459,657 + IAI46_16510 0.60 +0.1 3,459,666 + IAI46_16510 0.61 -1.0 3,459,667 - IAI46_16510 0.61 -0.7
Or see this region's nucleotide sequence