Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16295 and IAI46_16300 are separated by 3 nucleotides IAI46_16300 and IAI46_16305 are separated by 92 nucleotides IAI46_16305 and IAI46_16310 are separated by 523 nucleotides
IAI46_16295: IAI46_16295 - LysR family transcriptional regulator, at 3,415,998 to 3,416,930
_16295
IAI46_16300: IAI46_16300 - DUF937 domain-containing protein, at 3,416,934 to 3,417,320
_16300
IAI46_16305: IAI46_16305 - GlsB/YeaQ/YmgE family stress response membrane protein, at 3,417,413 to 3,417,661
_16305
IAI46_16310: IAI46_16310 - LysR family transcriptional regulator, at 3,418,185 to 3,419,087
_16310
Position (kb)
3416
3417
3418 Strain fitness (log2 ratio)
-1
0
1
2 at 3415.960 kb on - strand at 3415.969 kb on + strand at 3415.970 kb on - strand at 3415.972 kb on - strand at 3415.972 kb on - strand at 3415.976 kb on - strand at 3415.976 kb on - strand at 3416.441 kb on - strand, within IAI46_16295 at 3416.441 kb on - strand, within IAI46_16295 at 3416.509 kb on - strand, within IAI46_16295 at 3416.605 kb on + strand, within IAI46_16295 at 3416.605 kb on + strand, within IAI46_16295 at 3416.605 kb on + strand, within IAI46_16295 at 3416.606 kb on - strand, within IAI46_16295 at 3416.664 kb on - strand, within IAI46_16295 at 3416.664 kb on - strand, within IAI46_16295 at 3416.856 kb on + strand at 3416.879 kb on + strand at 3416.880 kb on - strand at 3416.880 kb on - strand at 3416.891 kb on + strand at 3417.132 kb on - strand, within IAI46_16300 at 3417.257 kb on - strand, within IAI46_16300 at 3417.300 kb on + strand at 3417.300 kb on + strand at 3417.301 kb on - strand at 3417.323 kb on + strand at 3417.520 kb on + strand, within IAI46_16305 at 3417.521 kb on - strand, within IAI46_16305 at 3417.526 kb on + strand, within IAI46_16305 at 3417.527 kb on - strand, within IAI46_16305 at 3417.528 kb on + strand, within IAI46_16305 at 3417.529 kb on - strand, within IAI46_16305 at 3417.529 kb on - strand, within IAI46_16305 at 3417.563 kb on - strand, within IAI46_16305 at 3417.602 kb on - strand, within IAI46_16305 at 3417.602 kb on - strand, within IAI46_16305 at 3417.665 kb on + strand at 3417.675 kb on - strand at 3417.822 kb on - strand at 3417.833 kb on + strand at 3417.833 kb on + strand at 3417.836 kb on + strand at 3417.837 kb on - strand at 3417.837 kb on - strand at 3417.837 kb on - strand at 3417.837 kb on - strand at 3417.838 kb on + strand at 3417.882 kb on - strand at 3417.930 kb on + strand at 3417.932 kb on + strand at 3417.932 kb on + strand at 3417.933 kb on - strand at 3417.947 kb on - strand at 3417.947 kb on - strand at 3417.992 kb on + strand at 3418.208 kb on + strand at 3418.208 kb on + strand at 3418.209 kb on - strand at 3418.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,415,960 - +0.4 3,415,969 + +0.4 3,415,970 - -0.2 3,415,972 - +2.3 3,415,972 - +0.1 3,415,976 - +0.9 3,415,976 - +0.1 3,416,441 - IAI46_16295 0.47 +2.1 3,416,441 - IAI46_16295 0.47 +0.8 3,416,509 - IAI46_16295 0.55 +0.6 3,416,605 + IAI46_16295 0.65 +0.6 3,416,605 + IAI46_16295 0.65 -0.2 3,416,605 + IAI46_16295 0.65 -0.3 3,416,606 - IAI46_16295 0.65 +0.1 3,416,664 - IAI46_16295 0.71 +0.6 3,416,664 - IAI46_16295 0.71 -1.1 3,416,856 + -0.1 3,416,879 + -0.2 3,416,880 - -0.3 3,416,880 - +0.5 3,416,891 + -0.1 3,417,132 - IAI46_16300 0.51 +1.2 3,417,257 - IAI46_16300 0.83 -1.4 3,417,300 + -0.2 3,417,300 + +0.3 3,417,301 - +0.9 3,417,323 + -0.4 3,417,520 + IAI46_16305 0.43 -0.6 3,417,521 - IAI46_16305 0.43 +0.0 3,417,526 + IAI46_16305 0.45 -0.3 3,417,527 - IAI46_16305 0.46 +1.1 3,417,528 + IAI46_16305 0.46 -1.6 3,417,529 - IAI46_16305 0.47 +0.1 3,417,529 - IAI46_16305 0.47 -0.3 3,417,563 - IAI46_16305 0.60 +0.4 3,417,602 - IAI46_16305 0.76 +0.2 3,417,602 - IAI46_16305 0.76 -0.1 3,417,665 + -1.2 3,417,675 - -0.6 3,417,822 - +0.3 3,417,833 + -1.0 3,417,833 + -0.1 3,417,836 + +0.1 3,417,837 - +0.2 3,417,837 - -0.4 3,417,837 - +1.1 3,417,837 - -1.3 3,417,838 + -0.5 3,417,882 - +0.4 3,417,930 + -0.3 3,417,932 + +1.3 3,417,932 + +1.1 3,417,933 - +1.1 3,417,947 - +1.6 3,417,947 - +0.3 3,417,992 + +0.3 3,418,208 + -0.4 3,418,208 + -1.2 3,418,209 - +0.5 3,418,271 - -0.2
Or see this region's nucleotide sequence