Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14490 and IAI46_14495 are separated by 409 nucleotides IAI46_14495 and IAI46_14500 are separated by 68 nucleotides IAI46_14500 and IAI46_14505 are separated by 83 nucleotides
IAI46_14490: IAI46_14490 - YcgN family cysteine cluster protein, at 3,074,337 to 3,074,783
_14490
IAI46_14495: IAI46_14495 - CsbD family protein, at 3,075,193 to 3,075,441
_14495
IAI46_14500: IAI46_14500 - fumarylacetoacetate hydrolase family protein, at 3,075,510 to 3,076,166
_14500
IAI46_14505: IAI46_14505 - lytic murein transglycosylase, at 3,076,250 to 3,077,314
_14505
Position (kb)
3075
3076
3077 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3074.618 kb on + strand, within IAI46_14490 at 3074.621 kb on + strand, within IAI46_14490 at 3074.654 kb on - strand, within IAI46_14490 at 3074.798 kb on + strand at 3074.799 kb on - strand at 3074.802 kb on + strand at 3074.843 kb on + strand at 3074.844 kb on - strand at 3074.847 kb on + strand at 3074.848 kb on - strand at 3074.848 kb on - strand at 3074.848 kb on - strand at 3074.848 kb on - strand at 3074.989 kb on - strand at 3075.029 kb on + strand at 3075.192 kb on + strand at 3075.193 kb on - strand at 3075.193 kb on - strand at 3075.304 kb on + strand, within IAI46_14495 at 3075.304 kb on + strand, within IAI46_14495 at 3075.304 kb on + strand, within IAI46_14495 at 3075.386 kb on + strand, within IAI46_14495 at 3075.644 kb on + strand, within IAI46_14500 at 3075.644 kb on + strand, within IAI46_14500 at 3075.646 kb on + strand, within IAI46_14500 at 3075.646 kb on + strand, within IAI46_14500 at 3075.647 kb on - strand, within IAI46_14500 at 3075.647 kb on - strand, within IAI46_14500 at 3075.766 kb on - strand, within IAI46_14500 at 3075.932 kb on + strand, within IAI46_14500 at 3076.090 kb on + strand, within IAI46_14500 at 3076.116 kb on - strand at 3076.135 kb on - strand at 3076.135 kb on - strand at 3076.154 kb on + strand at 3076.155 kb on - strand at 3076.162 kb on + strand at 3076.162 kb on + strand at 3076.163 kb on - strand at 3076.163 kb on - strand at 3076.167 kb on - strand at 3076.179 kb on + strand at 3076.189 kb on + strand at 3076.190 kb on - strand at 3076.206 kb on - strand at 3076.206 kb on - strand at 3076.206 kb on - strand at 3076.251 kb on + strand at 3076.277 kb on - strand at 3076.297 kb on - strand at 3076.567 kb on - strand, within IAI46_14505 at 3076.644 kb on + strand, within IAI46_14505 at 3076.645 kb on - strand, within IAI46_14505 at 3076.645 kb on - strand, within IAI46_14505 at 3076.645 kb on - strand, within IAI46_14505 at 3076.645 kb on - strand, within IAI46_14505 at 3076.648 kb on + strand, within IAI46_14505 at 3076.648 kb on + strand, within IAI46_14505 at 3076.649 kb on - strand, within IAI46_14505 at 3076.649 kb on - strand, within IAI46_14505 at 3076.649 kb on - strand, within IAI46_14505 at 3076.900 kb on - strand, within IAI46_14505 at 3076.925 kb on - strand, within IAI46_14505 at 3077.136 kb on + strand, within IAI46_14505
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,074,618 + IAI46_14490 0.63 -0.9 3,074,621 + IAI46_14490 0.64 -1.7 3,074,654 - IAI46_14490 0.71 -1.5 3,074,798 + +0.5 3,074,799 - -2.0 3,074,802 + -0.6 3,074,843 + +0.1 3,074,844 - -0.6 3,074,847 + +1.4 3,074,848 - -0.1 3,074,848 - +0.1 3,074,848 - +0.6 3,074,848 - -1.3 3,074,989 - +1.2 3,075,029 + +0.2 3,075,192 + +0.4 3,075,193 - -1.0 3,075,193 - -0.3 3,075,304 + IAI46_14495 0.45 -2.6 3,075,304 + IAI46_14495 0.45 +0.4 3,075,304 + IAI46_14495 0.45 +0.4 3,075,386 + IAI46_14495 0.78 +0.8 3,075,644 + IAI46_14500 0.20 +0.2 3,075,644 + IAI46_14500 0.20 -0.6 3,075,646 + IAI46_14500 0.21 +0.9 3,075,646 + IAI46_14500 0.21 -0.6 3,075,647 - IAI46_14500 0.21 -0.9 3,075,647 - IAI46_14500 0.21 +0.2 3,075,766 - IAI46_14500 0.39 +0.5 3,075,932 + IAI46_14500 0.64 -0.1 3,076,090 + IAI46_14500 0.88 +0.6 3,076,116 - +0.2 3,076,135 - +0.6 3,076,135 - +0.2 3,076,154 + +0.6 3,076,155 - +0.4 3,076,162 + -0.1 3,076,162 + -1.7 3,076,163 - +0.2 3,076,163 - -0.2 3,076,167 - +0.0 3,076,179 + -0.4 3,076,189 + -0.4 3,076,190 - -0.7 3,076,206 - +1.0 3,076,206 - +0.1 3,076,206 - +0.4 3,076,251 + +0.4 3,076,277 - -0.3 3,076,297 - +0.5 3,076,567 - IAI46_14505 0.30 +1.3 3,076,644 + IAI46_14505 0.37 -0.9 3,076,645 - IAI46_14505 0.37 -1.8 3,076,645 - IAI46_14505 0.37 -1.5 3,076,645 - IAI46_14505 0.37 -0.9 3,076,645 - IAI46_14505 0.37 -0.4 3,076,648 + IAI46_14505 0.37 +0.7 3,076,648 + IAI46_14505 0.37 +2.3 3,076,649 - IAI46_14505 0.37 +1.0 3,076,649 - IAI46_14505 0.37 -0.2 3,076,649 - IAI46_14505 0.37 -0.1 3,076,900 - IAI46_14505 0.61 +1.3 3,076,925 - IAI46_14505 0.63 +0.1 3,077,136 + IAI46_14505 0.83 -0.9
Or see this region's nucleotide sequence