Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12945 and IAI46_12950 are separated by 33 nucleotides IAI46_12950 and IAI46_12955 are separated by 123 nucleotides
IAI46_12945: IAI46_12945 - sugar ABC transporter permease, at 2,761,198 to 2,762,193
_12945
IAI46_12950: IAI46_12950 - ABC transporter substrate-binding protein, at 2,762,227 to 2,763,492
_12950
IAI46_12955: IAI46_12955 - LysR family transcriptional regulator, at 2,763,616 to 2,764,551
_12955
Position (kb)
2762
2763
2764 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2761.237 kb on - strand at 2761.270 kb on - strand at 2761.382 kb on + strand, within IAI46_12945 at 2761.450 kb on - strand, within IAI46_12945 at 2761.517 kb on + strand, within IAI46_12945 at 2761.692 kb on - strand, within IAI46_12945 at 2761.943 kb on + strand, within IAI46_12945 at 2761.944 kb on - strand, within IAI46_12945 at 2762.007 kb on - strand, within IAI46_12945 at 2762.311 kb on + strand at 2762.317 kb on - strand at 2762.331 kb on - strand at 2762.671 kb on - strand, within IAI46_12950 at 2762.691 kb on - strand, within IAI46_12950 at 2763.071 kb on + strand, within IAI46_12950 at 2763.074 kb on + strand, within IAI46_12950 at 2763.075 kb on - strand, within IAI46_12950 at 2763.211 kb on + strand, within IAI46_12950 at 2763.325 kb on - strand, within IAI46_12950 at 2763.472 kb on - strand at 2763.472 kb on - strand at 2763.528 kb on + strand at 2763.540 kb on - strand at 2763.925 kb on + strand, within IAI46_12955 at 2763.925 kb on + strand, within IAI46_12955 at 2763.925 kb on + strand, within IAI46_12955 at 2763.925 kb on + strand, within IAI46_12955 at 2763.926 kb on - strand, within IAI46_12955 at 2763.927 kb on + strand, within IAI46_12955 at 2763.927 kb on + strand, within IAI46_12955 at 2763.927 kb on + strand, within IAI46_12955 at 2763.936 kb on - strand, within IAI46_12955 at 2763.955 kb on + strand, within IAI46_12955 at 2764.025 kb on + strand, within IAI46_12955 at 2764.125 kb on + strand, within IAI46_12955 at 2764.233 kb on + strand, within IAI46_12955 at 2764.329 kb on - strand, within IAI46_12955 at 2764.366 kb on + strand, within IAI46_12955 at 2764.378 kb on - strand, within IAI46_12955 at 2764.457 kb on - strand, within IAI46_12955
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,761,237 - +1.9 2,761,270 - -1.2 2,761,382 + IAI46_12945 0.18 +0.3 2,761,450 - IAI46_12945 0.25 -0.1 2,761,517 + IAI46_12945 0.32 +0.4 2,761,692 - IAI46_12945 0.50 -0.3 2,761,943 + IAI46_12945 0.75 -1.0 2,761,944 - IAI46_12945 0.75 -0.4 2,762,007 - IAI46_12945 0.81 -0.5 2,762,311 + -0.1 2,762,317 - -0.8 2,762,331 - -0.1 2,762,671 - IAI46_12950 0.35 -0.7 2,762,691 - IAI46_12950 0.37 +0.6 2,763,071 + IAI46_12950 0.67 +0.6 2,763,074 + IAI46_12950 0.67 +0.3 2,763,075 - IAI46_12950 0.67 -1.8 2,763,211 + IAI46_12950 0.78 -0.1 2,763,325 - IAI46_12950 0.87 +2.4 2,763,472 - +0.3 2,763,472 - +1.0 2,763,528 + -0.8 2,763,540 - -0.1 2,763,925 + IAI46_12955 0.33 +1.3 2,763,925 + IAI46_12955 0.33 -0.1 2,763,925 + IAI46_12955 0.33 +0.2 2,763,925 + IAI46_12955 0.33 +0.1 2,763,926 - IAI46_12955 0.33 -0.3 2,763,927 + IAI46_12955 0.33 -0.7 2,763,927 + IAI46_12955 0.33 +0.9 2,763,927 + IAI46_12955 0.33 +0.6 2,763,936 - IAI46_12955 0.34 +1.6 2,763,955 + IAI46_12955 0.36 +0.6 2,764,025 + IAI46_12955 0.44 -0.6 2,764,125 + IAI46_12955 0.54 -1.1 2,764,233 + IAI46_12955 0.66 -0.2 2,764,329 - IAI46_12955 0.76 +0.5 2,764,366 + IAI46_12955 0.80 -1.5 2,764,378 - IAI46_12955 0.81 +0.7 2,764,457 - IAI46_12955 0.90 +1.6
Or see this region's nucleotide sequence