Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11955 and IAI46_11960 are separated by 84 nucleotides IAI46_11960 and IAI46_11965 are separated by 19 nucleotides IAI46_11965 and IAI46_11970 overlap by 4 nucleotides
IAI46_11955: IAI46_11955 - LacI family DNA-binding transcriptional regulator, at 2,531,507 to 2,532,547
_11955
IAI46_11960: IAI46_11960 - GMC family oxidoreductase, at 2,532,632 to 2,534,236
_11960
IAI46_11965: IAI46_11965 - hypothetical protein, at 2,534,256 to 2,534,786
_11965
IAI46_11970: IAI46_11970 - cytochrome c, at 2,534,783 to 2,536,018
_11970
Position (kb)
2532
2533
2534
2535 Strain fitness (log2 ratio)
-2
-1
0
1 at 2531.694 kb on + strand, within IAI46_11955 at 2531.694 kb on + strand, within IAI46_11955 at 2531.946 kb on + strand, within IAI46_11955 at 2531.981 kb on + strand, within IAI46_11955 at 2531.982 kb on - strand, within IAI46_11955 at 2531.982 kb on - strand, within IAI46_11955 at 2532.014 kb on - strand, within IAI46_11955 at 2532.189 kb on - strand, within IAI46_11955 at 2532.189 kb on - strand, within IAI46_11955 at 2532.189 kb on - strand, within IAI46_11955 at 2532.464 kb on - strand at 2532.625 kb on + strand at 2532.736 kb on + strand at 2532.806 kb on - strand, within IAI46_11960 at 2532.933 kb on + strand, within IAI46_11960 at 2532.952 kb on - strand, within IAI46_11960 at 2532.977 kb on - strand, within IAI46_11960 at 2533.028 kb on + strand, within IAI46_11960 at 2533.028 kb on + strand, within IAI46_11960 at 2533.287 kb on + strand, within IAI46_11960 at 2533.288 kb on + strand, within IAI46_11960 at 2533.331 kb on + strand, within IAI46_11960 at 2533.364 kb on + strand, within IAI46_11960 at 2533.409 kb on - strand, within IAI46_11960 at 2533.429 kb on + strand, within IAI46_11960 at 2533.429 kb on + strand, within IAI46_11960 at 2533.476 kb on + strand, within IAI46_11960 at 2533.477 kb on - strand, within IAI46_11960 at 2533.477 kb on - strand, within IAI46_11960 at 2533.567 kb on + strand, within IAI46_11960 at 2533.596 kb on - strand, within IAI46_11960 at 2533.695 kb on + strand, within IAI46_11960 at 2533.695 kb on + strand, within IAI46_11960 at 2533.696 kb on - strand, within IAI46_11960 at 2533.904 kb on - strand, within IAI46_11960 at 2533.976 kb on - strand, within IAI46_11960 at 2533.995 kb on + strand, within IAI46_11960 at 2533.995 kb on + strand, within IAI46_11960 at 2534.008 kb on - strand, within IAI46_11960 at 2534.114 kb on - strand at 2534.309 kb on - strand, within IAI46_11965 at 2534.309 kb on - strand, within IAI46_11965 at 2534.313 kb on - strand, within IAI46_11965 at 2534.313 kb on - strand, within IAI46_11965 at 2534.363 kb on - strand, within IAI46_11965 at 2534.371 kb on - strand, within IAI46_11965 at 2534.373 kb on + strand, within IAI46_11965 at 2534.424 kb on + strand, within IAI46_11965 at 2534.425 kb on - strand, within IAI46_11965 at 2534.434 kb on - strand, within IAI46_11965 at 2534.570 kb on - strand, within IAI46_11965 at 2534.633 kb on + strand, within IAI46_11965 at 2534.756 kb on - strand at 2534.877 kb on + strand at 2534.972 kb on + strand, within IAI46_11970 at 2534.973 kb on - strand, within IAI46_11970 at 2535.176 kb on + strand, within IAI46_11970 at 2535.176 kb on + strand, within IAI46_11970 at 2535.176 kb on + strand, within IAI46_11970 at 2535.186 kb on - strand, within IAI46_11970 at 2535.198 kb on + strand, within IAI46_11970
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,531,694 + IAI46_11955 0.18 -0.7 2,531,694 + IAI46_11955 0.18 -1.3 2,531,946 + IAI46_11955 0.42 -0.5 2,531,981 + IAI46_11955 0.46 -1.2 2,531,982 - IAI46_11955 0.46 +1.3 2,531,982 - IAI46_11955 0.46 -2.5 2,532,014 - IAI46_11955 0.49 -0.1 2,532,189 - IAI46_11955 0.66 +0.7 2,532,189 - IAI46_11955 0.66 +0.7 2,532,189 - IAI46_11955 0.66 +0.6 2,532,464 - -1.1 2,532,625 + -0.6 2,532,736 + +0.1 2,532,806 - IAI46_11960 0.11 +0.1 2,532,933 + IAI46_11960 0.19 +0.4 2,532,952 - IAI46_11960 0.20 -0.9 2,532,977 - IAI46_11960 0.21 +0.3 2,533,028 + IAI46_11960 0.25 -0.8 2,533,028 + IAI46_11960 0.25 -0.6 2,533,287 + IAI46_11960 0.41 +1.0 2,533,288 + IAI46_11960 0.41 -0.0 2,533,331 + IAI46_11960 0.44 +0.5 2,533,364 + IAI46_11960 0.46 +0.7 2,533,409 - IAI46_11960 0.48 -0.4 2,533,429 + IAI46_11960 0.50 -0.6 2,533,429 + IAI46_11960 0.50 -0.7 2,533,476 + IAI46_11960 0.53 -0.7 2,533,477 - IAI46_11960 0.53 -0.7 2,533,477 - IAI46_11960 0.53 -0.8 2,533,567 + IAI46_11960 0.58 +0.1 2,533,596 - IAI46_11960 0.60 +0.5 2,533,695 + IAI46_11960 0.66 -0.4 2,533,695 + IAI46_11960 0.66 +0.7 2,533,696 - IAI46_11960 0.66 +0.5 2,533,904 - IAI46_11960 0.79 +0.4 2,533,976 - IAI46_11960 0.84 +0.2 2,533,995 + IAI46_11960 0.85 +0.3 2,533,995 + IAI46_11960 0.85 +0.1 2,534,008 - IAI46_11960 0.86 +0.5 2,534,114 - -0.7 2,534,309 - IAI46_11965 0.10 -0.9 2,534,309 - IAI46_11965 0.10 +0.9 2,534,313 - IAI46_11965 0.11 +0.8 2,534,313 - IAI46_11965 0.11 +0.3 2,534,363 - IAI46_11965 0.20 -0.4 2,534,371 - IAI46_11965 0.22 -0.7 2,534,373 + IAI46_11965 0.22 -0.0 2,534,424 + IAI46_11965 0.32 +1.0 2,534,425 - IAI46_11965 0.32 +0.3 2,534,434 - IAI46_11965 0.34 -0.2 2,534,570 - IAI46_11965 0.59 -0.7 2,534,633 + IAI46_11965 0.71 +0.5 2,534,756 - -0.2 2,534,877 + -0.5 2,534,972 + IAI46_11970 0.15 -0.4 2,534,973 - IAI46_11970 0.15 +0.3 2,535,176 + IAI46_11970 0.32 +0.3 2,535,176 + IAI46_11970 0.32 +1.3 2,535,176 + IAI46_11970 0.32 -0.7 2,535,186 - IAI46_11970 0.33 +0.4 2,535,198 + IAI46_11970 0.34 +0.4
Or see this region's nucleotide sequence