Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09050 and IAI46_09055 are separated by 259 nucleotides IAI46_09055 and IAI46_09060 are separated by 51 nucleotides
IAI46_09050: IAI46_09050 - pyrimidine utilization protein A, at 1,938,518 to 1,939,618
_09050
IAI46_09055: IAI46_09055 - HTH-type transcriptional regulator RutR, at 1,939,878 to 1,940,552
_09055
IAI46_09060: IAI46_09060 - D-serine/D-alanine/glycine transporter, at 1,940,604 to 1,942,004
_09060
Position (kb)
1939
1940
1941 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1938.896 kb on - strand, within IAI46_09050 at 1938.906 kb on + strand, within IAI46_09050 at 1938.907 kb on - strand, within IAI46_09050 at 1939.011 kb on + strand, within IAI46_09050 at 1939.012 kb on - strand, within IAI46_09050 at 1939.179 kb on + strand, within IAI46_09050 at 1939.197 kb on + strand, within IAI46_09050 at 1939.245 kb on + strand, within IAI46_09050 at 1939.300 kb on + strand, within IAI46_09050 at 1939.301 kb on - strand, within IAI46_09050 at 1939.349 kb on - strand, within IAI46_09050 at 1939.349 kb on - strand, within IAI46_09050 at 1939.601 kb on - strand at 1939.846 kb on + strand at 1939.847 kb on - strand at 1939.877 kb on + strand at 1939.877 kb on + strand at 1939.977 kb on - strand, within IAI46_09055 at 1940.019 kb on - strand, within IAI46_09055 at 1940.083 kb on - strand, within IAI46_09055 at 1940.086 kb on - strand, within IAI46_09055 at 1940.086 kb on - strand, within IAI46_09055 at 1940.109 kb on + strand, within IAI46_09055 at 1940.110 kb on - strand, within IAI46_09055 at 1940.114 kb on - strand, within IAI46_09055 at 1940.114 kb on - strand, within IAI46_09055 at 1940.202 kb on + strand, within IAI46_09055 at 1940.202 kb on + strand, within IAI46_09055 at 1940.202 kb on + strand, within IAI46_09055 at 1940.202 kb on + strand, within IAI46_09055 at 1940.203 kb on - strand, within IAI46_09055 at 1940.203 kb on - strand, within IAI46_09055 at 1940.205 kb on - strand, within IAI46_09055 at 1940.205 kb on - strand, within IAI46_09055 at 1940.205 kb on - strand, within IAI46_09055 at 1940.207 kb on - strand, within IAI46_09055 at 1940.207 kb on - strand, within IAI46_09055 at 1940.372 kb on + strand, within IAI46_09055 at 1940.453 kb on - strand, within IAI46_09055 at 1940.506 kb on + strand at 1940.590 kb on - strand at 1940.590 kb on - strand at 1940.605 kb on + strand at 1940.622 kb on - strand at 1940.632 kb on - strand at 1940.635 kb on + strand at 1940.636 kb on - strand at 1940.636 kb on - strand at 1940.949 kb on - strand, within IAI46_09060 at 1941.226 kb on + strand, within IAI46_09060 at 1941.226 kb on + strand, within IAI46_09060 at 1941.227 kb on - strand, within IAI46_09060 at 1941.227 kb on - strand, within IAI46_09060
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,938,896 - IAI46_09050 0.34 +0.9 1,938,906 + IAI46_09050 0.35 +0.4 1,938,907 - IAI46_09050 0.35 +0.2 1,939,011 + IAI46_09050 0.45 +0.3 1,939,012 - IAI46_09050 0.45 +0.7 1,939,179 + IAI46_09050 0.60 +1.0 1,939,197 + IAI46_09050 0.62 +0.7 1,939,245 + IAI46_09050 0.66 +0.3 1,939,300 + IAI46_09050 0.71 -0.0 1,939,301 - IAI46_09050 0.71 -1.8 1,939,349 - IAI46_09050 0.75 -0.2 1,939,349 - IAI46_09050 0.75 +0.6 1,939,601 - +0.9 1,939,846 + -0.2 1,939,847 - -0.7 1,939,877 + +0.5 1,939,877 + +0.6 1,939,977 - IAI46_09055 0.15 -0.2 1,940,019 - IAI46_09055 0.21 -0.7 1,940,083 - IAI46_09055 0.30 +0.0 1,940,086 - IAI46_09055 0.31 +0.3 1,940,086 - IAI46_09055 0.31 +1.9 1,940,109 + IAI46_09055 0.34 +0.8 1,940,110 - IAI46_09055 0.34 +0.4 1,940,114 - IAI46_09055 0.35 -0.6 1,940,114 - IAI46_09055 0.35 +0.1 1,940,202 + IAI46_09055 0.48 -0.7 1,940,202 + IAI46_09055 0.48 +0.5 1,940,202 + IAI46_09055 0.48 -0.4 1,940,202 + IAI46_09055 0.48 -1.3 1,940,203 - IAI46_09055 0.48 -0.1 1,940,203 - IAI46_09055 0.48 +0.4 1,940,205 - IAI46_09055 0.48 +0.6 1,940,205 - IAI46_09055 0.48 +0.2 1,940,205 - IAI46_09055 0.48 -0.0 1,940,207 - IAI46_09055 0.49 +0.0 1,940,207 - IAI46_09055 0.49 -0.6 1,940,372 + IAI46_09055 0.73 +1.3 1,940,453 - IAI46_09055 0.85 -0.4 1,940,506 + +0.6 1,940,590 - -0.3 1,940,590 - -0.8 1,940,605 + +1.1 1,940,622 - +0.6 1,940,632 - -1.3 1,940,635 + +1.2 1,940,636 - +0.4 1,940,636 - +0.4 1,940,949 - IAI46_09060 0.25 -0.9 1,941,226 + IAI46_09060 0.44 +1.0 1,941,226 + IAI46_09060 0.44 +0.3 1,941,227 - IAI46_09060 0.44 +0.8 1,941,227 - IAI46_09060 0.44 -1.1
Or see this region's nucleotide sequence