Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08735 and IAI46_08740 are separated by 181 nucleotides IAI46_08740 and IAI46_08745 are separated by 66 nucleotides IAI46_08745 and IAI46_08750 are separated by 70 nucleotides
IAI46_08735: IAI46_08735 - L,D-transpeptidase, at 1,870,391 to 1,872,232
_08735
IAI46_08740: IAI46_08740 - YcbK family protein, at 1,872,414 to 1,872,962
_08740
IAI46_08745: IAI46_08745 - MBL fold metallo-hydrolase, at 1,873,029 to 1,873,676
_08745
IAI46_08750: IAI46_08750 - aspartate/tyrosine/aromatic aminotransferase, at 1,873,747 to 1,874,937
_08750
Position (kb)
1872
1873 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1871.512 kb on + strand, within IAI46_08735 at 1871.532 kb on - strand, within IAI46_08735 at 1871.543 kb on + strand, within IAI46_08735 at 1871.546 kb on + strand, within IAI46_08735 at 1871.587 kb on - strand, within IAI46_08735 at 1871.640 kb on + strand, within IAI46_08735 at 1871.641 kb on - strand, within IAI46_08735 at 1871.644 kb on + strand, within IAI46_08735 at 1871.717 kb on + strand, within IAI46_08735 at 1871.718 kb on - strand, within IAI46_08735 at 1871.735 kb on + strand, within IAI46_08735 at 1871.735 kb on + strand, within IAI46_08735 at 1871.736 kb on - strand, within IAI46_08735 at 1871.737 kb on + strand, within IAI46_08735 at 1871.738 kb on - strand, within IAI46_08735 at 1871.926 kb on + strand, within IAI46_08735 at 1871.927 kb on - strand, within IAI46_08735 at 1872.001 kb on + strand, within IAI46_08735 at 1872.002 kb on - strand, within IAI46_08735 at 1872.052 kb on - strand at 1872.064 kb on + strand at 1872.064 kb on + strand at 1872.065 kb on - strand at 1872.065 kb on - strand at 1872.071 kb on + strand at 1872.071 kb on + strand at 1872.072 kb on - strand at 1872.110 kb on + strand at 1872.110 kb on + strand at 1872.111 kb on - strand at 1872.171 kb on - strand at 1872.179 kb on - strand at 1872.231 kb on - strand at 1872.243 kb on + strand at 1872.253 kb on + strand at 1872.381 kb on + strand at 1872.527 kb on + strand, within IAI46_08740 at 1872.542 kb on + strand, within IAI46_08740 at 1872.542 kb on + strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.546 kb on - strand, within IAI46_08740 at 1872.551 kb on + strand, within IAI46_08740 at 1872.596 kb on + strand, within IAI46_08740 at 1872.596 kb on + strand, within IAI46_08740 at 1872.597 kb on - strand, within IAI46_08740 at 1872.597 kb on - strand, within IAI46_08740 at 1872.597 kb on - strand, within IAI46_08740 at 1872.650 kb on + strand, within IAI46_08740 at 1872.651 kb on - strand, within IAI46_08740 at 1872.676 kb on + strand, within IAI46_08740 at 1872.727 kb on + strand, within IAI46_08740 at 1872.812 kb on + strand, within IAI46_08740 at 1872.917 kb on + strand at 1872.917 kb on + strand at 1872.960 kb on + strand at 1872.961 kb on - strand at 1873.044 kb on - strand at 1873.213 kb on + strand, within IAI46_08745 at 1873.214 kb on - strand, within IAI46_08745 at 1873.242 kb on + strand, within IAI46_08745 at 1873.243 kb on - strand, within IAI46_08745 at 1873.249 kb on + strand, within IAI46_08745 at 1873.257 kb on + strand, within IAI46_08745 at 1873.424 kb on + strand, within IAI46_08745 at 1873.424 kb on + strand, within IAI46_08745 at 1873.424 kb on + strand, within IAI46_08745 at 1873.425 kb on - strand, within IAI46_08745 at 1873.436 kb on + strand, within IAI46_08745 at 1873.436 kb on + strand, within IAI46_08745 at 1873.445 kb on + strand, within IAI46_08745 at 1873.448 kb on + strand, within IAI46_08745 at 1873.616 kb on + strand at 1873.616 kb on + strand at 1873.617 kb on - strand at 1873.680 kb on + strand at 1873.681 kb on - strand at 1873.918 kb on - strand, within IAI46_08750 at 1873.957 kb on - strand, within IAI46_08750
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,871,512 + IAI46_08735 0.61 +0.1 1,871,532 - IAI46_08735 0.62 -0.6 1,871,543 + IAI46_08735 0.63 +0.4 1,871,546 + IAI46_08735 0.63 +0.6 1,871,587 - IAI46_08735 0.65 +0.1 1,871,640 + IAI46_08735 0.68 +0.6 1,871,641 - IAI46_08735 0.68 -2.3 1,871,644 + IAI46_08735 0.68 -1.7 1,871,717 + IAI46_08735 0.72 -0.2 1,871,718 - IAI46_08735 0.72 +0.1 1,871,735 + IAI46_08735 0.73 +0.5 1,871,735 + IAI46_08735 0.73 +1.7 1,871,736 - IAI46_08735 0.73 -0.3 1,871,737 + IAI46_08735 0.73 +0.4 1,871,738 - IAI46_08735 0.73 +0.3 1,871,926 + IAI46_08735 0.83 +1.2 1,871,927 - IAI46_08735 0.83 +0.6 1,872,001 + IAI46_08735 0.87 -0.1 1,872,002 - IAI46_08735 0.87 +0.3 1,872,052 - -0.3 1,872,064 + -0.1 1,872,064 + +0.7 1,872,065 - -0.3 1,872,065 - +0.5 1,872,071 + +0.5 1,872,071 + -1.3 1,872,072 - -2.9 1,872,110 + -1.0 1,872,110 + -0.0 1,872,111 - -0.7 1,872,171 - -0.2 1,872,179 - -0.6 1,872,231 - -0.6 1,872,243 + +0.0 1,872,253 + -0.5 1,872,381 + +1.3 1,872,527 + IAI46_08740 0.21 +0.1 1,872,542 + IAI46_08740 0.23 +1.4 1,872,542 + IAI46_08740 0.23 +1.4 1,872,546 - IAI46_08740 0.24 -0.0 1,872,546 - IAI46_08740 0.24 +0.4 1,872,546 - IAI46_08740 0.24 -0.3 1,872,546 - IAI46_08740 0.24 -0.1 1,872,551 + IAI46_08740 0.25 +0.4 1,872,596 + IAI46_08740 0.33 +2.2 1,872,596 + IAI46_08740 0.33 -1.8 1,872,597 - IAI46_08740 0.33 +1.6 1,872,597 - IAI46_08740 0.33 +0.2 1,872,597 - IAI46_08740 0.33 +0.3 1,872,650 + IAI46_08740 0.43 +0.1 1,872,651 - IAI46_08740 0.43 -0.8 1,872,676 + IAI46_08740 0.48 +0.0 1,872,727 + IAI46_08740 0.57 -0.5 1,872,812 + IAI46_08740 0.72 +1.3 1,872,917 + +0.6 1,872,917 + +0.3 1,872,960 + +0.3 1,872,961 - -0.6 1,873,044 - -0.7 1,873,213 + IAI46_08745 0.28 +0.5 1,873,214 - IAI46_08745 0.29 +0.1 1,873,242 + IAI46_08745 0.33 -0.1 1,873,243 - IAI46_08745 0.33 +1.2 1,873,249 + IAI46_08745 0.34 -0.5 1,873,257 + IAI46_08745 0.35 +0.3 1,873,424 + IAI46_08745 0.61 +0.5 1,873,424 + IAI46_08745 0.61 +0.1 1,873,424 + IAI46_08745 0.61 -0.1 1,873,425 - IAI46_08745 0.61 -0.7 1,873,436 + IAI46_08745 0.63 -0.1 1,873,436 + IAI46_08745 0.63 +0.4 1,873,445 + IAI46_08745 0.64 -0.3 1,873,448 + IAI46_08745 0.65 -0.7 1,873,616 + -1.1 1,873,616 + +0.8 1,873,617 - -0.3 1,873,680 + -0.4 1,873,681 - -0.2 1,873,918 - IAI46_08750 0.14 -1.0 1,873,957 - IAI46_08750 0.18 -0.3
Or see this region's nucleotide sequence