Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08520 and IAI46_08525 are separated by 106 nucleotides IAI46_08525 and IAI46_08530 are separated by 30 nucleotides IAI46_08530 and IAI46_08535 are separated by 2 nucleotides
IAI46_08520: IAI46_08520 - translation initiation factor IF-1, at 1,814,515 to 1,814,733
_08520
IAI46_08525: IAI46_08525 - leucyl/phenylalanyl-tRNA--protein transferase, at 1,814,840 to 1,815,565
_08525
IAI46_08530: IAI46_08530 - cysteine/glutathione ABC transporter ATP-binding protein/permease CydC, at 1,815,596 to 1,817,332
_08530
IAI46_08535: IAI46_08535 - cysteine/glutathione ABC transporter permease/ATP-binding protein CydD, at 1,817,335 to 1,819,101
_08535
Position (kb)
1815
1816
1817
1818 Strain fitness (log2 ratio)
-2
-1
0
1 at 1814.996 kb on - strand, within IAI46_08525 at 1815.027 kb on + strand, within IAI46_08525 at 1815.088 kb on + strand, within IAI46_08525 at 1815.347 kb on - strand, within IAI46_08525 at 1815.441 kb on + strand, within IAI46_08525 at 1815.441 kb on + strand, within IAI46_08525 at 1815.442 kb on - strand, within IAI46_08525 at 1815.452 kb on + strand, within IAI46_08525 at 1815.553 kb on + strand at 1815.553 kb on + strand at 1815.554 kb on - strand at 1815.554 kb on - strand at 1815.554 kb on - strand at 1815.565 kb on + strand at 1815.566 kb on - strand at 1815.567 kb on + strand at 1815.567 kb on + strand at 1815.567 kb on + strand at 1815.567 kb on + strand at 1815.568 kb on - strand at 1815.568 kb on - strand at 1815.586 kb on - strand at 1815.586 kb on - strand at 1815.605 kb on + strand at 1815.605 kb on + strand at 1815.617 kb on - strand at 1815.732 kb on + strand at 1816.054 kb on + strand, within IAI46_08530 at 1816.228 kb on + strand, within IAI46_08530 at 1816.229 kb on - strand, within IAI46_08530 at 1816.291 kb on - strand, within IAI46_08530 at 1816.295 kb on - strand, within IAI46_08530 at 1816.688 kb on + strand, within IAI46_08530 at 1816.689 kb on - strand, within IAI46_08530 at 1816.932 kb on + strand, within IAI46_08530 at 1816.932 kb on + strand, within IAI46_08530 at 1816.933 kb on - strand, within IAI46_08530 at 1817.158 kb on - strand, within IAI46_08530 at 1817.158 kb on - strand, within IAI46_08530 at 1817.301 kb on + strand at 1817.337 kb on - strand at 1817.338 kb on + strand at 1817.338 kb on + strand at 1817.339 kb on - strand at 1817.339 kb on - strand at 1817.714 kb on + strand, within IAI46_08535 at 1817.714 kb on + strand, within IAI46_08535 at 1817.715 kb on - strand, within IAI46_08535 at 1817.773 kb on + strand, within IAI46_08535 at 1817.773 kb on + strand, within IAI46_08535 at 1818.260 kb on + strand, within IAI46_08535 at 1818.302 kb on + strand, within IAI46_08535
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,814,996 - IAI46_08525 0.21 -0.7 1,815,027 + IAI46_08525 0.26 +0.6 1,815,088 + IAI46_08525 0.34 -0.2 1,815,347 - IAI46_08525 0.70 +0.0 1,815,441 + IAI46_08525 0.83 +0.4 1,815,441 + IAI46_08525 0.83 +0.2 1,815,442 - IAI46_08525 0.83 -0.0 1,815,452 + IAI46_08525 0.84 -0.2 1,815,553 + -0.2 1,815,553 + -2.7 1,815,554 - -2.3 1,815,554 - +0.1 1,815,554 - -0.1 1,815,565 + -0.6 1,815,566 - +0.3 1,815,567 + -0.9 1,815,567 + -1.2 1,815,567 + +0.4 1,815,567 + -0.0 1,815,568 - +0.2 1,815,568 - -0.2 1,815,586 - +0.4 1,815,586 - +0.7 1,815,605 + -0.5 1,815,605 + -0.7 1,815,617 - -0.6 1,815,732 + +0.4 1,816,054 + IAI46_08530 0.26 +0.7 1,816,228 + IAI46_08530 0.36 +1.7 1,816,229 - IAI46_08530 0.36 -0.6 1,816,291 - IAI46_08530 0.40 -0.3 1,816,295 - IAI46_08530 0.40 +1.0 1,816,688 + IAI46_08530 0.63 -0.1 1,816,689 - IAI46_08530 0.63 +0.5 1,816,932 + IAI46_08530 0.77 +1.1 1,816,932 + IAI46_08530 0.77 -0.3 1,816,933 - IAI46_08530 0.77 +1.2 1,817,158 - IAI46_08530 0.90 -0.1 1,817,158 - IAI46_08530 0.90 +1.0 1,817,301 + +0.9 1,817,337 - -0.1 1,817,338 + -1.7 1,817,338 + -0.6 1,817,339 - -0.3 1,817,339 - -0.0 1,817,714 + IAI46_08535 0.21 -0.8 1,817,714 + IAI46_08535 0.21 +0.2 1,817,715 - IAI46_08535 0.22 +0.4 1,817,773 + IAI46_08535 0.25 +0.2 1,817,773 + IAI46_08535 0.25 -0.1 1,818,260 + IAI46_08535 0.52 +1.0 1,818,302 + IAI46_08535 0.55 -1.0
Or see this region's nucleotide sequence