Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08385 and IAI46_08390 are separated by 222 nucleotides IAI46_08390 and IAI46_08395 are separated by 68 nucleotides IAI46_08395 and IAI46_08400 are separated by 64 nucleotides
IAI46_08385: IAI46_08385 - putrescine ABC transporter permease PotI, at 1,784,428 to 1,785,273
_08385
IAI46_08390: IAI46_08390 - YbjO family protein, at 1,785,496 to 1,785,975
_08390
IAI46_08395: IAI46_08395 - 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC, at 1,786,044 to 1,787,171
_08395
IAI46_08400: IAI46_08400 - arginine ABC transporter substrate-binding protein, at 1,787,236 to 1,787,970
_08400
Position (kb)
1786
1787
1788 Strain fitness (log2 ratio)
-1
0
1
2 at 1785.133 kb on - strand, within IAI46_08385 at 1785.133 kb on - strand, within IAI46_08385 at 1785.216 kb on + strand at 1785.268 kb on - strand at 1785.303 kb on - strand at 1785.332 kb on - strand at 1785.348 kb on + strand at 1785.351 kb on - strand at 1785.355 kb on + strand at 1785.355 kb on + strand at 1785.364 kb on - strand at 1785.406 kb on + strand at 1785.406 kb on + strand at 1785.407 kb on - strand at 1785.407 kb on - strand at 1785.407 kb on - strand at 1785.410 kb on + strand at 1785.410 kb on + strand at 1785.411 kb on - strand at 1785.414 kb on + strand at 1785.414 kb on + strand at 1785.414 kb on + strand at 1785.415 kb on - strand at 1785.464 kb on + strand at 1785.464 kb on + strand at 1785.464 kb on + strand at 1785.467 kb on - strand at 1785.687 kb on - strand, within IAI46_08390 at 1785.773 kb on - strand, within IAI46_08390 at 1785.773 kb on - strand, within IAI46_08390 at 1785.803 kb on - strand, within IAI46_08390 at 1785.982 kb on - strand at 1785.990 kb on - strand at 1785.990 kb on - strand at 1786.043 kb on - strand at 1786.059 kb on + strand at 1786.059 kb on + strand at 1786.060 kb on - strand at 1786.060 kb on - strand at 1786.214 kb on + strand, within IAI46_08395 at 1786.215 kb on - strand, within IAI46_08395 at 1786.243 kb on + strand, within IAI46_08395 at 1786.413 kb on + strand, within IAI46_08395 at 1786.466 kb on - strand, within IAI46_08395 at 1786.466 kb on - strand, within IAI46_08395 at 1786.556 kb on + strand, within IAI46_08395 at 1786.556 kb on + strand, within IAI46_08395 at 1786.653 kb on + strand, within IAI46_08395 at 1786.653 kb on + strand, within IAI46_08395 at 1786.707 kb on + strand, within IAI46_08395 at 1786.708 kb on - strand, within IAI46_08395 at 1786.893 kb on - strand, within IAI46_08395 at 1786.952 kb on - strand, within IAI46_08395 at 1787.026 kb on - strand, within IAI46_08395 at 1787.027 kb on + strand, within IAI46_08395 at 1787.028 kb on - strand, within IAI46_08395 at 1787.035 kb on - strand, within IAI46_08395 at 1787.117 kb on + strand at 1787.117 kb on + strand at 1787.118 kb on - strand at 1787.118 kb on - strand at 1787.129 kb on + strand at 1787.130 kb on - strand at 1787.139 kb on + strand at 1787.161 kb on + strand at 1787.193 kb on + strand at 1787.193 kb on + strand at 1787.194 kb on - strand at 1787.216 kb on + strand at 1787.216 kb on + strand at 1787.216 kb on + strand at 1787.238 kb on - strand at 1787.270 kb on + strand at 1787.415 kb on + strand, within IAI46_08400 at 1787.416 kb on - strand, within IAI46_08400 at 1787.467 kb on - strand, within IAI46_08400 at 1787.550 kb on - strand, within IAI46_08400 at 1787.657 kb on + strand, within IAI46_08400 at 1787.657 kb on + strand, within IAI46_08400 at 1787.658 kb on - strand, within IAI46_08400 at 1787.658 kb on - strand, within IAI46_08400 at 1787.876 kb on + strand, within IAI46_08400 at 1787.877 kb on - strand, within IAI46_08400 at 1788.083 kb on - strand at 1788.091 kb on - strand at 1788.103 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,785,133 - IAI46_08385 0.83 -0.7 1,785,133 - IAI46_08385 0.83 -0.3 1,785,216 + -0.4 1,785,268 - -1.0 1,785,303 - +0.5 1,785,332 - -0.3 1,785,348 + +0.6 1,785,351 - +1.4 1,785,355 + +0.6 1,785,355 + -0.5 1,785,364 - +1.2 1,785,406 + +0.3 1,785,406 + +0.4 1,785,407 - +0.3 1,785,407 - +1.1 1,785,407 - -0.0 1,785,410 + +0.2 1,785,410 + -0.7 1,785,411 - -0.1 1,785,414 + -0.0 1,785,414 + -1.2 1,785,414 + +0.2 1,785,415 - +0.6 1,785,464 + +0.1 1,785,464 + -0.5 1,785,464 + -0.2 1,785,467 - +0.4 1,785,687 - IAI46_08390 0.40 -0.3 1,785,773 - IAI46_08390 0.58 +0.6 1,785,773 - IAI46_08390 0.58 -0.6 1,785,803 - IAI46_08390 0.64 +0.8 1,785,982 - -0.1 1,785,990 - +0.2 1,785,990 - +0.9 1,786,043 - +0.3 1,786,059 + -0.0 1,786,059 + +0.4 1,786,060 - +0.4 1,786,060 - -1.0 1,786,214 + IAI46_08395 0.15 -0.2 1,786,215 - IAI46_08395 0.15 -0.2 1,786,243 + IAI46_08395 0.18 +0.2 1,786,413 + IAI46_08395 0.33 +0.8 1,786,466 - IAI46_08395 0.37 -0.4 1,786,466 - IAI46_08395 0.37 +0.2 1,786,556 + IAI46_08395 0.45 -0.7 1,786,556 + IAI46_08395 0.45 -0.2 1,786,653 + IAI46_08395 0.54 -0.7 1,786,653 + IAI46_08395 0.54 -1.1 1,786,707 + IAI46_08395 0.59 -0.2 1,786,708 - IAI46_08395 0.59 -0.1 1,786,893 - IAI46_08395 0.75 +0.3 1,786,952 - IAI46_08395 0.80 -0.8 1,787,026 - IAI46_08395 0.87 +0.1 1,787,027 + IAI46_08395 0.87 -0.5 1,787,028 - IAI46_08395 0.87 -0.0 1,787,035 - IAI46_08395 0.88 +0.5 1,787,117 + -0.4 1,787,117 + -0.7 1,787,118 - -0.3 1,787,118 - -0.0 1,787,129 + +0.7 1,787,130 - -0.2 1,787,139 + +1.1 1,787,161 + +0.6 1,787,193 + +0.9 1,787,193 + +0.4 1,787,194 - +0.5 1,787,216 + -0.8 1,787,216 + -0.1 1,787,216 + +0.3 1,787,238 - +0.7 1,787,270 + +1.1 1,787,415 + IAI46_08400 0.24 +2.1 1,787,416 - IAI46_08400 0.24 -0.0 1,787,467 - IAI46_08400 0.31 +0.5 1,787,550 - IAI46_08400 0.43 +1.2 1,787,657 + IAI46_08400 0.57 +0.7 1,787,657 + IAI46_08400 0.57 -0.8 1,787,658 - IAI46_08400 0.57 +0.7 1,787,658 - IAI46_08400 0.57 +0.8 1,787,876 + IAI46_08400 0.87 -1.7 1,787,877 - IAI46_08400 0.87 +1.1 1,788,083 - -1.1 1,788,091 - -0.7 1,788,103 - +0.8
Or see this region's nucleotide sequence