Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06030 and IAI46_06035 are separated by 104 nucleotides IAI46_06035 and IAI46_06040 are separated by 19 nucleotides IAI46_06040 and IAI46_06045 are separated by 40 nucleotides IAI46_06045 and IAI46_06050 are separated by 45 nucleotides IAI46_06050 and IAI46_06055 are separated by 29 nucleotides IAI46_06055 and IAI46_06060 are separated by 8 nucleotides IAI46_06060 and IAI46_06065 are separated by 385 nucleotides
IAI46_06030: IAI46_06030 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 1,291,140 to 1,292,321
_06030
IAI46_06035: IAI46_06035 - tRNA-Gln, at 1,292,426 to 1,292,500
_06035
IAI46_06040: IAI46_06040 - tRNA-Met, at 1,292,520 to 1,292,596
_06040
IAI46_06045: IAI46_06045 - tRNA-Gln, at 1,292,637 to 1,292,711
_06045
IAI46_06050: IAI46_06050 - tRNA-Gln, at 1,292,757 to 1,292,831
_06050
IAI46_06055: IAI46_06055 - tRNA-Leu, at 1,292,861 to 1,292,945
_06055
IAI46_06060: IAI46_06060 - tRNA-Met, at 1,292,954 to 1,293,030
_06060
IAI46_06065: IAI46_06065 - asparagine synthase B, at 1,293,416 to 1,295,080
_06065
Position (kb)
1292
1293 Strain fitness (log2 ratio)
-1
0
1 at 1292.320 kb on - strand at 1292.334 kb on - strand at 1292.363 kb on - strand at 1292.528 kb on - strand, within IAI46_06040 at 1292.560 kb on - strand, within IAI46_06040 at 1292.560 kb on - strand, within IAI46_06040 at 1292.636 kb on - strand at 1293.184 kb on + strand at 1293.184 kb on + strand at 1293.184 kb on + strand at 1293.184 kb on + strand at 1293.248 kb on + strand at 1293.248 kb on + strand at 1293.249 kb on - strand at 1293.250 kb on + strand at 1293.250 kb on + strand at 1293.250 kb on + strand at 1293.251 kb on - strand at 1293.417 kb on + strand at 1293.417 kb on + strand at 1293.418 kb on - strand at 1293.595 kb on - strand, within IAI46_06065
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,292,320 - +0.3 1,292,334 - -1.7 1,292,363 - -0.5 1,292,528 - IAI46_06040 0.10 -0.3 1,292,560 - IAI46_06040 0.52 -0.0 1,292,560 - IAI46_06040 0.52 +0.5 1,292,636 - +0.5 1,293,184 + +0.3 1,293,184 + +0.6 1,293,184 + -0.0 1,293,184 + +0.0 1,293,248 + +0.1 1,293,248 + +0.3 1,293,249 - +0.3 1,293,250 + -0.1 1,293,250 + +0.6 1,293,250 + -0.4 1,293,251 - -0.2 1,293,417 + -0.3 1,293,417 + +0.3 1,293,418 - +0.4 1,293,595 - IAI46_06065 0.11 +0.0
Or see this region's nucleotide sequence