Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05700 and IAI46_05705 are separated by 742 nucleotides IAI46_05705 and IAI46_05710 are separated by 249 nucleotides
IAI46_05700: IAI46_05700 - DUF4942 domain-containing protein, at 1,228,224 to 1,229,057
_05700
IAI46_05705: IAI46_05705 - hypothetical protein, at 1,229,800 to 1,229,958
_05705
IAI46_05710: IAI46_05710 - hypothetical protein, at 1,230,208 to 1,230,387
_05710
Position (kb)
1229
1230 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1228.904 kb on - strand, within IAI46_05700 at 1228.919 kb on + strand, within IAI46_05700 at 1228.924 kb on - strand, within IAI46_05700 at 1228.936 kb on - strand, within IAI46_05700 at 1228.940 kb on + strand, within IAI46_05700 at 1228.940 kb on + strand, within IAI46_05700 at 1228.951 kb on - strand, within IAI46_05700 at 1228.973 kb on + strand, within IAI46_05700 at 1228.974 kb on - strand at 1229.003 kb on + strand at 1229.003 kb on + strand at 1229.003 kb on + strand at 1229.066 kb on - strand at 1229.128 kb on - strand at 1229.136 kb on - strand at 1229.145 kb on + strand at 1229.145 kb on + strand at 1229.248 kb on + strand at 1229.249 kb on - strand at 1229.291 kb on - strand at 1229.374 kb on + strand at 1229.375 kb on - strand at 1229.389 kb on + strand at 1229.390 kb on - strand at 1229.393 kb on + strand at 1229.393 kb on + strand at 1229.393 kb on + strand at 1229.393 kb on + strand at 1229.394 kb on - strand at 1229.394 kb on - strand at 1229.406 kb on + strand at 1229.454 kb on + strand at 1229.455 kb on - strand at 1229.461 kb on - strand at 1229.503 kb on + strand at 1229.504 kb on - strand at 1229.533 kb on + strand at 1229.533 kb on + strand at 1229.553 kb on + strand at 1229.554 kb on - strand at 1229.584 kb on + strand at 1229.584 kb on + strand at 1229.585 kb on - strand at 1229.595 kb on + strand at 1229.606 kb on + strand at 1229.607 kb on - strand at 1229.631 kb on + strand at 1229.631 kb on + strand at 1229.665 kb on - strand at 1229.665 kb on - strand at 1229.703 kb on + strand at 1229.703 kb on + strand at 1229.704 kb on - strand at 1229.720 kb on - strand at 1229.736 kb on - strand at 1229.768 kb on + strand at 1229.769 kb on - strand at 1229.774 kb on - strand at 1229.777 kb on - strand at 1229.777 kb on - strand at 1229.780 kb on + strand at 1229.780 kb on + strand at 1229.787 kb on - strand at 1229.805 kb on + strand at 1229.809 kb on - strand at 1229.905 kb on - strand, within IAI46_05705 at 1229.957 kb on - strand at 1229.957 kb on - strand at 1230.054 kb on + strand at 1230.057 kb on - strand at 1230.057 kb on - strand at 1230.057 kb on - strand at 1230.119 kb on + strand at 1230.119 kb on + strand at 1230.120 kb on - strand at 1230.201 kb on + strand at 1230.202 kb on - strand at 1230.202 kb on - strand at 1230.319 kb on + strand, within IAI46_05710 at 1230.401 kb on - strand at 1230.443 kb on + strand at 1230.502 kb on + strand at 1230.503 kb on - strand at 1230.503 kb on - strand at 1230.600 kb on + strand at 1230.611 kb on - strand at 1230.654 kb on + strand at 1230.702 kb on + strand at 1230.715 kb on + strand at 1230.745 kb on + strand at 1230.745 kb on + strand at 1230.751 kb on - strand at 1230.756 kb on + strand at 1230.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,228,904 - IAI46_05700 0.82 +0.3 1,228,919 + IAI46_05700 0.83 +0.3 1,228,924 - IAI46_05700 0.84 +0.6 1,228,936 - IAI46_05700 0.85 -0.6 1,228,940 + IAI46_05700 0.86 -0.2 1,228,940 + IAI46_05700 0.86 +0.4 1,228,951 - IAI46_05700 0.87 +0.3 1,228,973 + IAI46_05700 0.90 +0.4 1,228,974 - +0.1 1,229,003 + -0.0 1,229,003 + +0.3 1,229,003 + +1.3 1,229,066 - +0.1 1,229,128 - -1.8 1,229,136 - +0.2 1,229,145 + -0.5 1,229,145 + -1.2 1,229,248 + +0.6 1,229,249 - -0.7 1,229,291 - +0.7 1,229,374 + +0.8 1,229,375 - +0.1 1,229,389 + -0.5 1,229,390 - -0.1 1,229,393 + +0.8 1,229,393 + -1.8 1,229,393 + -0.1 1,229,393 + +0.1 1,229,394 - -0.5 1,229,394 - -0.4 1,229,406 + -0.5 1,229,454 + -1.1 1,229,455 - +0.4 1,229,461 - +1.1 1,229,503 + +1.4 1,229,504 - +2.0 1,229,533 + +0.7 1,229,533 + +0.5 1,229,553 + +0.3 1,229,554 - +0.3 1,229,584 + +0.4 1,229,584 + +1.6 1,229,585 - -0.1 1,229,595 + -0.1 1,229,606 + -0.5 1,229,607 - -0.6 1,229,631 + +0.4 1,229,631 + -0.5 1,229,665 - +0.8 1,229,665 - +0.8 1,229,703 + +0.8 1,229,703 + -1.2 1,229,704 - +0.7 1,229,720 - -0.4 1,229,736 - +0.6 1,229,768 + +0.2 1,229,769 - -2.1 1,229,774 - -0.7 1,229,777 - -0.7 1,229,777 - +0.1 1,229,780 + +0.4 1,229,780 + -0.1 1,229,787 - -0.2 1,229,805 + -0.5 1,229,809 - +0.1 1,229,905 - IAI46_05705 0.66 +0.4 1,229,957 - +0.0 1,229,957 - +0.1 1,230,054 + +0.2 1,230,057 - -0.5 1,230,057 - +0.0 1,230,057 - -1.0 1,230,119 + -0.7 1,230,119 + +0.6 1,230,120 - +0.3 1,230,201 + +1.0 1,230,202 - +0.7 1,230,202 - +0.2 1,230,319 + IAI46_05710 0.62 +1.2 1,230,401 - +0.3 1,230,443 + +0.2 1,230,502 + -1.0 1,230,503 - +0.3 1,230,503 - -0.1 1,230,600 + -0.9 1,230,611 - +0.9 1,230,654 + -1.2 1,230,702 + +0.1 1,230,715 + -0.1 1,230,745 + -0.4 1,230,745 + -0.2 1,230,751 - +0.4 1,230,756 + +0.5 1,230,866 - +0.1
Or see this region's nucleotide sequence