Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04350 and IAI46_04355 are separated by 255 nucleotides IAI46_04355 and IAI46_04360 are separated by 5 nucleotides
IAI46_04345: IAI46_04345 - class II glutamine amidotransferase, at 932,090 to 932,896
_04345
IAI46_04350: IAI46_04350 - murein L,D-transpeptidase, at 932,828 to 933,598
_04350
IAI46_04355: IAI46_04355 - hypothetical protein, at 933,854 to 934,171
_04355
IAI46_04360: IAI46_04360 - Na(+)-translocating NADH-quinone reductase subunit A, at 934,177 to 935,526
_04360
Position (kb) 933
934
935 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 932.901 kb on + strand at 932.901 kb on + strand at 932.902 kb on - strand at 932.946 kb on + strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.997 kb on + strand, within IAI46_04350 at 932.997 kb on + strand, within IAI46_04350 at 932.997 kb on + strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 933.003 kb on + strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.087 kb on + strand, within IAI46_04350 at 933.088 kb on - strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.097 kb on + strand, within IAI46_04350 at 933.097 kb on + strand, within IAI46_04350 at 933.117 kb on + strand, within IAI46_04350 at 933.117 kb on + strand, within IAI46_04350 at 933.139 kb on - strand, within IAI46_04350 at 933.144 kb on + strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.178 kb on - strand, within IAI46_04350 at 933.216 kb on + strand, within IAI46_04350 at 933.217 kb on - strand, within IAI46_04350 at 933.229 kb on - strand, within IAI46_04350 at 933.242 kb on - strand, within IAI46_04350 at 933.269 kb on + strand, within IAI46_04350 at 933.269 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.283 kb on - strand, within IAI46_04350 at 933.286 kb on + strand, within IAI46_04350 at 933.286 kb on + strand, within IAI46_04350 at 933.286 kb on + strand, within IAI46_04350 at 933.287 kb on - strand, within IAI46_04350 at 933.287 kb on - strand, within IAI46_04350 at 933.319 kb on + strand, within IAI46_04350 at 933.320 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.465 kb on - strand, within IAI46_04350 at 933.472 kb on + strand, within IAI46_04350 at 933.473 kb on - strand, within IAI46_04350 at 933.474 kb on + strand, within IAI46_04350 at 933.475 kb on - strand, within IAI46_04350 at 933.491 kb on + strand, within IAI46_04350 at 933.503 kb on - strand, within IAI46_04350 at 933.600 kb on - strand at 933.602 kb on + strand at 933.602 kb on + strand at 933.613 kb on - strand at 933.613 kb on - strand at 933.613 kb on - strand at 933.613 kb on - strand at 933.614 kb on + strand at 933.615 kb on - strand at 933.618 kb on + strand at 933.618 kb on + strand at 933.618 kb on + strand at 933.618 kb on + strand at 933.635 kb on + strand at 933.635 kb on + strand at 933.660 kb on + strand at 933.660 kb on + strand at 933.669 kb on - strand at 933.677 kb on - strand at 933.693 kb on - strand at 933.710 kb on + strand at 933.711 kb on - strand at 933.727 kb on + strand at 933.729 kb on + strand at 933.790 kb on + strand at 933.807 kb on - strand at 933.866 kb on - strand at 933.883 kb on + strand at 933.894 kb on + strand, within IAI46_04355 at 933.895 kb on - strand, within IAI46_04355 at 933.921 kb on + strand, within IAI46_04355 at 933.921 kb on + strand, within IAI46_04355 at 933.921 kb on + strand, within IAI46_04355 at 933.922 kb on - strand, within IAI46_04355 at 933.962 kb on - strand, within IAI46_04355 at 933.962 kb on - strand, within IAI46_04355 at 934.003 kb on - strand, within IAI46_04355 at 934.076 kb on - strand, within IAI46_04355 at 934.091 kb on - strand, within IAI46_04355 at 934.091 kb on - strand, within IAI46_04355 at 934.140 kb on + strand at 934.168 kb on - strand at 934.169 kb on + strand at 934.170 kb on - strand at 934.170 kb on - strand at 934.176 kb on + strand at 934.183 kb on - strand at 934.283 kb on - strand at 934.356 kb on + strand, within IAI46_04360 at 934.374 kb on - strand, within IAI46_04360 at 934.406 kb on + strand, within IAI46_04360 at 934.407 kb on - strand, within IAI46_04360 at 934.636 kb on - strand, within IAI46_04360 at 934.704 kb on + strand, within IAI46_04360 at 934.704 kb on + strand, within IAI46_04360 at 934.807 kb on + strand, within IAI46_04360 at 934.807 kb on + strand, within IAI46_04360 at 934.807 kb on + strand, within IAI46_04360 at 934.808 kb on - strand, within IAI46_04360 at 934.809 kb on + strand, within IAI46_04360 at 935.103 kb on + strand, within IAI46_04360 at 935.128 kb on + strand, within IAI46_04360 at 935.128 kb on + strand, within IAI46_04360
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 932,901 + -1.1 932,901 + -0.2 932,902 - +1.1 932,946 + IAI46_04350 0.15 +1.6 932,947 - IAI46_04350 0.15 +0.6 932,947 - IAI46_04350 0.15 -0.2 932,947 - IAI46_04350 0.15 +0.2 932,947 - IAI46_04350 0.15 -0.1 932,997 + IAI46_04350 0.22 +1.0 932,997 + IAI46_04350 0.22 -0.0 932,997 + IAI46_04350 0.22 -1.2 932,998 - IAI46_04350 0.22 +0.0 932,998 - IAI46_04350 0.22 -0.9 932,998 - IAI46_04350 0.22 +0.6 932,998 - IAI46_04350 0.22 +1.5 932,998 - IAI46_04350 0.22 +0.2 933,003 + IAI46_04350 0.23 +0.2 933,037 - IAI46_04350 0.27 +0.3 933,037 - IAI46_04350 0.27 -0.4 933,037 - IAI46_04350 0.27 -0.0 933,037 - IAI46_04350 0.27 +0.2 933,087 + IAI46_04350 0.34 +1.8 933,088 - IAI46_04350 0.34 -0.4 933,091 + IAI46_04350 0.34 +0.3 933,091 + IAI46_04350 0.34 +0.1 933,091 + IAI46_04350 0.34 -0.4 933,091 + IAI46_04350 0.34 +0.9 933,091 + IAI46_04350 0.34 -0.6 933,091 + IAI46_04350 0.34 -0.4 933,092 - IAI46_04350 0.34 -0.0 933,092 - IAI46_04350 0.34 +0.2 933,092 - IAI46_04350 0.34 -1.0 933,092 - IAI46_04350 0.34 -0.0 933,092 - IAI46_04350 0.34 -0.2 933,092 - IAI46_04350 0.34 -0.9 933,092 - IAI46_04350 0.34 +0.9 933,092 - IAI46_04350 0.34 +0.4 933,092 - IAI46_04350 0.34 +0.4 933,092 - IAI46_04350 0.34 -0.3 933,097 + IAI46_04350 0.35 +0.3 933,097 + IAI46_04350 0.35 +0.3 933,117 + IAI46_04350 0.37 +0.9 933,117 + IAI46_04350 0.37 -0.1 933,139 - IAI46_04350 0.40 -0.9 933,144 + IAI46_04350 0.41 +0.2 933,158 - IAI46_04350 0.43 -0.3 933,158 - IAI46_04350 0.43 -0.6 933,158 - IAI46_04350 0.43 +1.3 933,158 - IAI46_04350 0.43 +0.9 933,159 + IAI46_04350 0.43 -0.8 933,159 + IAI46_04350 0.43 +0.7 933,159 + IAI46_04350 0.43 -0.1 933,159 + IAI46_04350 0.43 -0.2 933,160 - IAI46_04350 0.43 -0.4 933,160 - IAI46_04350 0.43 -0.2 933,160 - IAI46_04350 0.43 -0.2 933,160 - IAI46_04350 0.43 +1.0 933,160 - IAI46_04350 0.43 +0.6 933,160 - IAI46_04350 0.43 -0.0 933,160 - IAI46_04350 0.43 -0.1 933,160 - IAI46_04350 0.43 -0.3 933,178 - IAI46_04350 0.45 +0.5 933,216 + IAI46_04350 0.50 -1.9 933,217 - IAI46_04350 0.50 +1.8 933,229 - IAI46_04350 0.52 +0.3 933,242 - IAI46_04350 0.54 +0.1 933,269 + IAI46_04350 0.57 -1.0 933,269 + IAI46_04350 0.57 +1.4 933,282 + IAI46_04350 0.59 -0.9 933,282 + IAI46_04350 0.59 -0.0 933,282 + IAI46_04350 0.59 +0.6 933,282 + IAI46_04350 0.59 -0.1 933,282 + IAI46_04350 0.59 -0.5 933,283 - IAI46_04350 0.59 -0.0 933,286 + IAI46_04350 0.59 +0.4 933,286 + IAI46_04350 0.59 -1.4 933,286 + IAI46_04350 0.59 +0.1 933,287 - IAI46_04350 0.60 +1.3 933,287 - IAI46_04350 0.60 -0.6 933,319 + IAI46_04350 0.64 -0.2 933,320 - IAI46_04350 0.64 -0.3 933,436 - IAI46_04350 0.79 -0.4 933,436 - IAI46_04350 0.79 +0.8 933,436 - IAI46_04350 0.79 -0.5 933,436 - IAI46_04350 0.79 +0.0 933,436 - IAI46_04350 0.79 -0.0 933,465 - IAI46_04350 0.83 +0.4 933,472 + IAI46_04350 0.84 -0.3 933,473 - IAI46_04350 0.84 +0.5 933,474 + IAI46_04350 0.84 +0.3 933,475 - IAI46_04350 0.84 -0.1 933,491 + IAI46_04350 0.86 +0.7 933,503 - IAI46_04350 0.88 +0.6 933,600 - -0.1 933,602 + +0.6 933,602 + +1.3 933,613 - +0.7 933,613 - +0.1 933,613 - +0.9 933,613 - -0.7 933,614 + +0.5 933,615 - +0.8 933,618 + -0.2 933,618 + +0.3 933,618 + +0.3 933,618 + +0.0 933,635 + +0.9 933,635 + +0.6 933,660 + +3.1 933,660 + +0.8 933,669 - +0.4 933,677 - +0.5 933,693 - +0.8 933,710 + -0.6 933,711 - -0.9 933,727 + +0.1 933,729 + +0.6 933,790 + -1.5 933,807 - +0.5 933,866 - -0.1 933,883 + -0.8 933,894 + IAI46_04355 0.13 +0.8 933,895 - IAI46_04355 0.13 -0.8 933,921 + IAI46_04355 0.21 +0.1 933,921 + IAI46_04355 0.21 -1.1 933,921 + IAI46_04355 0.21 +0.8 933,922 - IAI46_04355 0.21 -0.2 933,962 - IAI46_04355 0.34 +0.1 933,962 - IAI46_04355 0.34 +0.5 934,003 - IAI46_04355 0.47 -0.1 934,076 - IAI46_04355 0.70 +0.7 934,091 - IAI46_04355 0.75 +0.7 934,091 - IAI46_04355 0.75 +0.2 934,140 + -0.4 934,168 - +0.3 934,169 + +1.7 934,170 - +0.6 934,170 - -0.3 934,176 + +0.4 934,183 - +0.1 934,283 - +0.0 934,356 + IAI46_04360 0.13 +0.6 934,374 - IAI46_04360 0.15 +1.0 934,406 + IAI46_04360 0.17 -1.4 934,407 - IAI46_04360 0.17 +0.7 934,636 - IAI46_04360 0.34 +0.1 934,704 + IAI46_04360 0.39 -0.4 934,704 + IAI46_04360 0.39 +0.0 934,807 + IAI46_04360 0.47 -0.5 934,807 + IAI46_04360 0.47 +0.3 934,807 + IAI46_04360 0.47 -0.1 934,808 - IAI46_04360 0.47 -0.2 934,809 + IAI46_04360 0.47 -0.7 935,103 + IAI46_04360 0.69 +0.3 935,128 + IAI46_04360 0.70 -0.3 935,128 + IAI46_04360 0.70 +0.4
Or see this region's nucleotide sequence