Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3420

Experiment: m.b. Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.1 mg/ml
4,046,618	+		Echvi_3419	0.25	-0.9
4,046,619	-		Echvi_3419	0.25	+1.2
4,046,667	+		Echvi_3419	0.29	+1.2
4,046,667	+		Echvi_3419	0.29	+0.7
4,046,695	-		Echvi_3419	0.31	+0.7
4,046,870	-		Echvi_3419	0.45	+0.6
4,046,870	-		Echvi_3419	0.45	-1.8
4,046,870	-		Echvi_3419	0.45	+1.5
4,046,895	+		Echvi_3419	0.47	-0.5
4,046,896	-		Echvi_3419	0.47	-0.5
4,046,896	-		Echvi_3419	0.47	+0.6
4,046,973	+		Echvi_3419	0.53	-0.3
4,047,007	-		Echvi_3419	0.56	+0.3
4,047,013	+		Echvi_3419	0.56	+0.5
4,047,062	+		Echvi_3419	0.60	-2.1
4,047,063	-		Echvi_3419	0.60	-0.1
4,047,063	-		Echvi_3419	0.60	-1.9
4,047,063	-		Echvi_3419	0.60	+0.6
4,047,089	+		Echvi_3419	0.62	+1.4
4,047,116	-		Echvi_3419	0.65	-1.5
4,047,249	-		Echvi_3419	0.75	-1.6
4,047,267	+		Echvi_3419	0.76	-0.8
4,047,268	-		Echvi_3419	0.77	-0.5
4,047,270	+		Echvi_3419	0.77	+0.1
4,047,270	+		Echvi_3419	0.77	-0.6
4,047,271	-		Echvi_3419	0.77	+0.1
4,047,282	-		Echvi_3419	0.78	+0.2
4,047,339	+		Echvi_3419	0.82	+0.1
4,047,339	+		Echvi_3419	0.82	-1.7
4,047,340	-		Echvi_3419	0.82	-1.8
4,047,470	+				+0.4
4,047,479	+				+0.7
4,047,482	+				-0.2
4,047,483	-				-0.1
4,047,483	-				-0.1
4,047,531	+				-0.6
4,047,532	-				+0.2
4,047,558	-				-0.0
4,047,563	+				-1.0
4,047,564	-				-0.7
4,047,741	+		Echvi_3420	0.21	-0.1
4,047,762	+		Echvi_3420	0.23	+0.2
4,047,762	+		Echvi_3420	0.23	-0.7
4,047,762	+		Echvi_3420	0.23	+1.4
4,047,762	+		Echvi_3420	0.23	-2.3
4,047,762	+		Echvi_3420	0.23	-2.2
4,047,762	+		Echvi_3420	0.23	-1.4
4,047,762	+		Echvi_3420	0.23	+0.9
4,047,762	+		Echvi_3420	0.23	-2.1
4,047,762	+		Echvi_3420	0.23	+0.5
4,047,763	-		Echvi_3420	0.23	-1.2
4,047,763	-		Echvi_3420	0.23	-0.9
4,047,763	-		Echvi_3420	0.23	-0.0
4,047,763	-		Echvi_3420	0.23	+0.3
4,047,763	-		Echvi_3420	0.23	-0.5
4,047,764	+		Echvi_3420	0.24	-0.2
4,047,764	+		Echvi_3420	0.24	-1.9
4,047,764	+		Echvi_3420	0.24	+0.5
4,047,764	+		Echvi_3420	0.24	-0.1
4,047,764	+		Echvi_3420	0.24	-1.8
4,047,764	+		Echvi_3420	0.24	+1.2
4,047,764	+		Echvi_3420	0.24	-0.0
4,047,765	-		Echvi_3420	0.24	-0.2
4,047,765	-		Echvi_3420	0.24	+0.3
4,047,765	-		Echvi_3420	0.24	-1.5
4,047,765	-		Echvi_3420	0.24	-0.1
4,047,765	-		Echvi_3420	0.24	+0.8
4,047,765	-		Echvi_3420	0.24	-0.3
4,047,908	+		Echvi_3420	0.41	-1.8
4,047,911	+		Echvi_3420	0.41	-0.3
4,047,933	-		Echvi_3420	0.44	-0.3
4,047,966	+		Echvi_3420	0.48	-0.3
4,047,966	+		Echvi_3420	0.48	-0.5
4,047,967	-		Echvi_3420	0.48	-0.1
4,047,967	-		Echvi_3420	0.48	+1.5
4,047,977	+		Echvi_3420	0.49	-2.8
4,047,977	+		Echvi_3420	0.49	-1.2
4,047,978	-		Echvi_3420	0.49	-1.3
4,047,978	-		Echvi_3420	0.49	+0.3
4,047,978	-		Echvi_3420	0.49	-0.1
4,047,994	+		Echvi_3420	0.51	+1.0
4,048,010	-		Echvi_3420	0.53	+0.7
4,048,093	+		Echvi_3420	0.63	-0.7
4,048,122	+		Echvi_3420	0.66	+0.5
4,048,141	-		Echvi_3420	0.68	-0.5
4,048,186	-		Echvi_3420	0.74	-0.3
4,048,188	-		Echvi_3420	0.74	-0.0
4,048,188	-		Echvi_3420	0.74	-0.2
4,048,206	+		Echvi_3420	0.76	+0.3
4,048,381	-				-0.5
4,048,421	-				-1.0
4,048,435	+				+0.6
4,048,435	+				+0.7
4,048,436	-				+0.1
4,048,437	+				+0.8
4,048,437	+				+0.0
4,048,438	-				+0.7
4,048,453	-				-1.7
4,048,453	-				-0.3
4,048,453	-				+1.0
4,048,546	+				-0.4
4,048,547	-				+0.3
4,048,547	-				-0.4
4,048,562	+				+0.3
4,048,563	-				+1.1
4,048,573	+				-0.1
4,048,573	+				+0.0
4,048,574	-				+1.0
4,048,599	+				+0.3
4,048,600	-				-0.5
4,048,601	+				+2.2
4,048,601	+				-0.8
4,048,604	+				+0.1
4,048,613	-				-1.6
4,048,757	+				+0.5
4,048,845	+		Echvi_3421	0.13	-0.2
4,048,845	+		Echvi_3421	0.13	-0.5
4,048,846	-		Echvi_3421	0.13	-0.3
4,048,887	+		Echvi_3421	0.15	+0.9
4,048,888	-		Echvi_3421	0.15	-0.1
4,048,905	+		Echvi_3421	0.15	-0.8
4,048,988	-		Echvi_3421	0.19	+1.4
4,049,006	+		Echvi_3421	0.20	+0.8
4,049,059	+		Echvi_3421	0.22	+0.1
4,049,062	+		Echvi_3421	0.22	-0.9
4,049,062	+		Echvi_3421	0.22	-2.0
4,049,062	+		Echvi_3421	0.22	+0.1
4,049,063	-		Echvi_3421	0.23	+0.7
4,049,098	+		Echvi_3421	0.24	-0.1
4,049,106	-		Echvi_3421	0.24	+0.9
4,049,141	-		Echvi_3421	0.26	+0.0
4,049,152	-		Echvi_3421	0.26	+0.4
4,049,191	-		Echvi_3421	0.28	+0.5
4,049,249	-		Echvi_3421	0.31	+0.9
4,049,266	-		Echvi_3421	0.32	+1.3
4,049,270	+		Echvi_3421	0.32	-1.0
4,049,282	-		Echvi_3421	0.32	-0.4
4,049,282	-		Echvi_3421	0.32	-1.9
4,049,285	+		Echvi_3421	0.32	-1.7
4,049,285	+		Echvi_3421	0.32	-0.1
4,049,286	-		Echvi_3421	0.32	+0.1
4,049,286	-		Echvi_3421	0.32	+0.4
4,049,363	-		Echvi_3421	0.36	+0.1