Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4269 and EX28DRAFT_4270 are separated by 108 nucleotides EX28DRAFT_4270 and EX28DRAFT_4271 are separated by 154 nucleotides EX28DRAFT_4271 and EX28DRAFT_4272 are separated by 118 nucleotides
EX28DRAFT_4269: EX28DRAFT_4269 - SOS regulatory protein LexA, at 73,348 to 73,956
_4269
EX28DRAFT_4270: EX28DRAFT_4270 - Diacylglycerol kinase, at 74,065 to 74,433
_4270
EX28DRAFT_4271: EX28DRAFT_4271 - glycerol-3-phosphate acyltransferase (EC 2.3.1.15), at 74,588 to 77,008
_4271
EX28DRAFT_4272: EX28DRAFT_4272 - gluconate transporter, at 77,127 to 78,467
_4272
Position (kb) 74
75
76
77
78 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 74.048 kb on + strand at 74.048 kb on + strand at 74.048 kb on + strand at 74.048 kb on + strand at 74.053 kb on - strand at 74.230 kb on + strand, within EX28DRAFT_4270 at 74.502 kb on + strand at 74.503 kb on - strand at 74.562 kb on + strand at 76.723 kb on + strand, within EX28DRAFT_4271 at 76.960 kb on + strand at 76.961 kb on - strand at 77.059 kb on + strand at 77.060 kb on - strand at 77.060 kb on - strand at 77.062 kb on + strand at 77.063 kb on - strand at 77.063 kb on - strand at 77.064 kb on + strand at 77.064 kb on + strand at 77.064 kb on + strand at 77.064 kb on + strand at 77.064 kb on + strand at 77.064 kb on + strand at 77.064 kb on + strand at 77.065 kb on - strand at 77.114 kb on + strand at 77.115 kb on - strand at 77.141 kb on + strand at 77.141 kb on + strand at 77.142 kb on - strand at 77.207 kb on + strand at 77.306 kb on + strand, within EX28DRAFT_4272 at 77.306 kb on + strand, within EX28DRAFT_4272 at 77.335 kb on + strand, within EX28DRAFT_4272 at 77.411 kb on + strand, within EX28DRAFT_4272 at 77.552 kb on + strand, within EX28DRAFT_4272 at 77.843 kb on + strand, within EX28DRAFT_4272 at 77.844 kb on - strand, within EX28DRAFT_4272 at 77.894 kb on + strand, within EX28DRAFT_4272
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 74,048 + -0.1 74,048 + +0.1 74,048 + -1.3 74,048 + -0.2 74,053 - +0.3 74,230 + EX28DRAFT_4270 0.45 -1.6 74,502 + +0.5 74,503 - +0.0 74,562 + -0.0 76,723 + EX28DRAFT_4271 0.88 -4.0 76,960 + -0.7 76,961 - -1.3 77,059 + -0.2 77,060 - +0.4 77,060 - -0.5 77,062 + -0.2 77,063 - -0.1 77,063 - +0.8 77,064 + +0.3 77,064 + -1.6 77,064 + +0.1 77,064 + +0.1 77,064 + -0.0 77,064 + -0.4 77,064 + +0.0 77,065 - +1.0 77,114 + -0.2 77,115 - -0.2 77,141 + +0.5 77,141 + -0.4 77,142 - +0.8 77,207 + -0.2 77,306 + EX28DRAFT_4272 0.13 -0.1 77,306 + EX28DRAFT_4272 0.13 +0.5 77,335 + EX28DRAFT_4272 0.16 +0.3 77,411 + EX28DRAFT_4272 0.21 -0.3 77,552 + EX28DRAFT_4272 0.32 -0.2 77,843 + EX28DRAFT_4272 0.53 -1.6 77,844 - EX28DRAFT_4272 0.53 -0.1 77,894 + EX28DRAFT_4272 0.57 +0.0
Or see this region's nucleotide sequence