Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2484 and EX28DRAFT_2485 are separated by 110 nucleotides EX28DRAFT_2485 and EX28DRAFT_2486 overlap by 1 nucleotides EX28DRAFT_2486 and EX28DRAFT_2487 are separated by 54 nucleotides
EX28DRAFT_2484: EX28DRAFT_2484 - Molecular chaperone, HSP90 family, at 2,514,593 to 2,516,467
_2484
EX28DRAFT_2485: EX28DRAFT_2485 - DNA replication and repair protein RecR, at 2,516,578 to 2,517,183
_2485
EX28DRAFT_2486: EX28DRAFT_2486 - DNA-binding protein, YbaB/EbfC family, at 2,517,183 to 2,517,515
_2486
EX28DRAFT_2487: EX28DRAFT_2487 - DNA polymerase III, subunit gamma and tau, at 2,517,570 to 2,519,498
_2487
EX28DRAFT_2488: EX28DRAFT_2488 - RNA, at 2,518,176 to 2,518,240
_2488
Position (kb)
2516
2517
2518 Strain fitness (log2 ratio)
-2
-1
0
1 at 2515.633 kb on - strand, within EX28DRAFT_2484 at 2515.647 kb on + strand, within EX28DRAFT_2484 at 2515.658 kb on - strand, within EX28DRAFT_2484 at 2515.745 kb on - strand, within EX28DRAFT_2484 at 2515.787 kb on + strand, within EX28DRAFT_2484 at 2515.788 kb on - strand, within EX28DRAFT_2484 at 2515.984 kb on - strand, within EX28DRAFT_2484 at 2516.086 kb on - strand, within EX28DRAFT_2484 at 2516.470 kb on - strand at 2516.494 kb on - strand at 2516.505 kb on - strand at 2516.715 kb on + strand, within EX28DRAFT_2485 at 2516.717 kb on + strand, within EX28DRAFT_2485 at 2516.717 kb on + strand, within EX28DRAFT_2485 at 2516.718 kb on - strand, within EX28DRAFT_2485 at 2516.718 kb on - strand, within EX28DRAFT_2485 at 2516.906 kb on + strand, within EX28DRAFT_2485 at 2516.906 kb on + strand, within EX28DRAFT_2485 at 2516.907 kb on - strand, within EX28DRAFT_2485 at 2516.907 kb on - strand, within EX28DRAFT_2485 at 2517.516 kb on - strand at 2517.516 kb on - strand at 2517.554 kb on + strand at 2517.555 kb on - strand at 2517.555 kb on - strand at 2517.555 kb on - strand at 2517.555 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 2,515,633 - EX28DRAFT_2484 0.55 +0.3 2,515,647 + EX28DRAFT_2484 0.56 +0.5 2,515,658 - EX28DRAFT_2484 0.57 -0.1 2,515,745 - EX28DRAFT_2484 0.61 +0.3 2,515,787 + EX28DRAFT_2484 0.64 +0.6 2,515,788 - EX28DRAFT_2484 0.64 -0.2 2,515,984 - EX28DRAFT_2484 0.74 -1.4 2,516,086 - EX28DRAFT_2484 0.80 -0.0 2,516,470 - -0.3 2,516,494 - -1.5 2,516,505 - +0.5 2,516,715 + EX28DRAFT_2485 0.23 -0.9 2,516,717 + EX28DRAFT_2485 0.23 +0.2 2,516,717 + EX28DRAFT_2485 0.23 -0.8 2,516,718 - EX28DRAFT_2485 0.23 -1.8 2,516,718 - EX28DRAFT_2485 0.23 -0.6 2,516,906 + EX28DRAFT_2485 0.54 -0.5 2,516,906 + EX28DRAFT_2485 0.54 -2.6 2,516,907 - EX28DRAFT_2485 0.54 -0.6 2,516,907 - EX28DRAFT_2485 0.54 +0.2 2,517,516 - -1.1 2,517,516 - -1.4 2,517,554 + +0.6 2,517,555 - -0.1 2,517,555 - -0.7 2,517,555 - -1.6 2,517,555 - +0.7
Or see this region's nucleotide sequence