Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2470 and EX28DRAFT_2471 are separated by 44 nucleotides EX28DRAFT_2471 and EX28DRAFT_2472 overlap by 4 nucleotides EX28DRAFT_2472 and EX28DRAFT_2473 overlap by 4 nucleotides EX28DRAFT_2473 and EX28DRAFT_2474 are separated by 108 nucleotides
EX28DRAFT_2470: EX28DRAFT_2470 - hypothetical protein, at 2,499,353 to 2,500,204
_2470
EX28DRAFT_2471: EX28DRAFT_2471 - Membrane protease subunits, stomatin/prohibitin homologs, at 2,500,249 to 2,501,163
_2471
EX28DRAFT_2472: EX28DRAFT_2472 - Membrane protein implicated in regulation of membrane protease activity, at 2,501,160 to 2,501,612
_2472
EX28DRAFT_2473: EX28DRAFT_2473 - Cu(I)-responsive transcriptional regulator, at 2,501,609 to 2,502,019
_2473
EX28DRAFT_2474: EX28DRAFT_2474 - copper-(or silver)-translocating P-type ATPase, at 2,502,128 to 2,504,626
_2474
Position (kb)
2501
2502 Strain fitness (log2 ratio)
-2
-1
0
1 at 2500.183 kb on + strand at 2500.184 kb on - strand at 2500.188 kb on - strand at 2500.193 kb on + strand at 2500.193 kb on + strand at 2500.194 kb on - strand at 2500.249 kb on - strand at 2500.290 kb on + strand at 2500.543 kb on + strand, within EX28DRAFT_2471 at 2500.544 kb on - strand, within EX28DRAFT_2471 at 2500.672 kb on - strand, within EX28DRAFT_2471 at 2500.672 kb on - strand, within EX28DRAFT_2471 at 2500.908 kb on - strand, within EX28DRAFT_2471 at 2501.005 kb on + strand, within EX28DRAFT_2471 at 2501.006 kb on - strand, within EX28DRAFT_2471 at 2501.006 kb on - strand, within EX28DRAFT_2471 at 2501.025 kb on + strand, within EX28DRAFT_2471 at 2501.462 kb on + strand, within EX28DRAFT_2472 at 2501.890 kb on + strand, within EX28DRAFT_2473 at 2501.961 kb on + strand, within EX28DRAFT_2473 at 2502.014 kb on - strand at 2502.063 kb on + strand at 2502.064 kb on - strand at 2502.097 kb on - strand at 2502.097 kb on - strand at 2502.113 kb on + strand at 2502.114 kb on - strand at 2502.139 kb on + strand at 2502.321 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 2,500,183 + +0.3 2,500,184 - -0.9 2,500,188 - -0.2 2,500,193 + -0.2 2,500,193 + -0.3 2,500,194 - +0.0 2,500,249 - +0.6 2,500,290 + -0.4 2,500,543 + EX28DRAFT_2471 0.32 +0.4 2,500,544 - EX28DRAFT_2471 0.32 +0.2 2,500,672 - EX28DRAFT_2471 0.46 +0.0 2,500,672 - EX28DRAFT_2471 0.46 -0.3 2,500,908 - EX28DRAFT_2471 0.72 +0.0 2,501,005 + EX28DRAFT_2471 0.83 -0.1 2,501,006 - EX28DRAFT_2471 0.83 -1.8 2,501,006 - EX28DRAFT_2471 0.83 -0.8 2,501,025 + EX28DRAFT_2471 0.85 +0.0 2,501,462 + EX28DRAFT_2472 0.67 -0.7 2,501,890 + EX28DRAFT_2473 0.68 -0.2 2,501,961 + EX28DRAFT_2473 0.86 +0.0 2,502,014 - +0.4 2,502,063 + +0.5 2,502,064 - +0.9 2,502,097 - -0.7 2,502,097 - -0.1 2,502,113 + +0.2 2,502,114 - +1.2 2,502,139 + +0.2 2,502,321 + -1.8
Or see this region's nucleotide sequence