Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0742 and EX28DRAFT_0743 are separated by 463 nucleotides EX28DRAFT_0743 and EX28DRAFT_0744 are separated by 6 nucleotides
EX28DRAFT_0742: EX28DRAFT_0742 - PTS system, mannose/fructose/sorbose family, IIB component, at 738,580 to 739,545
_0742
EX28DRAFT_0743: EX28DRAFT_0743 - Membrane protein TerC, possibly involved in tellurium resistance, at 740,009 to 741,568
_0743
EX28DRAFT_0744: EX28DRAFT_0744 - FOG: EAL domain, at 741,575 to 743,173
_0744
Position (kb) 740
741
742 Strain fitness (log2 ratio) -2
-1
0
1
2 at 739.034 kb on - strand, within EX28DRAFT_0742 at 739.047 kb on + strand, within EX28DRAFT_0742 at 739.071 kb on - strand, within EX28DRAFT_0742 at 739.071 kb on - strand, within EX28DRAFT_0742 at 739.286 kb on + strand, within EX28DRAFT_0742 at 739.286 kb on + strand, within EX28DRAFT_0742 at 739.344 kb on + strand, within EX28DRAFT_0742 at 739.344 kb on + strand, within EX28DRAFT_0742 at 739.345 kb on - strand, within EX28DRAFT_0742 at 739.345 kb on - strand, within EX28DRAFT_0742 at 739.345 kb on - strand, within EX28DRAFT_0742 at 739.345 kb on - strand, within EX28DRAFT_0742 at 739.533 kb on + strand at 739.551 kb on - strand at 739.551 kb on - strand at 739.551 kb on - strand at 739.561 kb on - strand at 739.572 kb on + strand at 739.673 kb on - strand at 739.733 kb on + strand at 739.758 kb on + strand at 739.829 kb on - strand at 739.832 kb on - strand at 739.832 kb on - strand at 739.842 kb on + strand at 739.843 kb on - strand at 739.844 kb on + strand at 739.845 kb on - strand at 739.860 kb on + strand at 739.862 kb on + strand at 739.863 kb on - strand at 739.910 kb on - strand at 739.933 kb on + strand at 740.249 kb on + strand, within EX28DRAFT_0743 at 740.249 kb on + strand, within EX28DRAFT_0743 at 740.250 kb on - strand, within EX28DRAFT_0743 at 740.271 kb on + strand, within EX28DRAFT_0743 at 740.271 kb on + strand, within EX28DRAFT_0743 at 740.322 kb on + strand, within EX28DRAFT_0743 at 740.322 kb on + strand, within EX28DRAFT_0743 at 740.322 kb on + strand, within EX28DRAFT_0743 at 740.578 kb on + strand, within EX28DRAFT_0743 at 740.579 kb on - strand, within EX28DRAFT_0743 at 740.632 kb on + strand, within EX28DRAFT_0743 at 740.633 kb on - strand, within EX28DRAFT_0743 at 740.645 kb on + strand, within EX28DRAFT_0743 at 740.713 kb on + strand, within EX28DRAFT_0743 at 740.714 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 741.236 kb on - strand, within EX28DRAFT_0743 at 741.566 kb on + strand at 741.682 kb on - strand at 741.704 kb on + strand at 741.724 kb on - strand at 741.800 kb on - strand, within EX28DRAFT_0744 at 742.065 kb on - strand, within EX28DRAFT_0744 at 742.065 kb on - strand, within EX28DRAFT_0744 at 742.067 kb on + strand, within EX28DRAFT_0744 at 742.067 kb on + strand, within EX28DRAFT_0744 at 742.105 kb on + strand, within EX28DRAFT_0744 at 742.106 kb on - strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.138 kb on - strand, within EX28DRAFT_0744 at 742.143 kb on - strand, within EX28DRAFT_0744 at 742.170 kb on + strand, within EX28DRAFT_0744 at 742.366 kb on + strand, within EX28DRAFT_0744 at 742.367 kb on - strand, within EX28DRAFT_0744 at 742.467 kb on - strand, within EX28DRAFT_0744
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 739,034 - EX28DRAFT_0742 0.47 -0.8 739,047 + EX28DRAFT_0742 0.48 -0.7 739,071 - EX28DRAFT_0742 0.51 -0.1 739,071 - EX28DRAFT_0742 0.51 -0.6 739,286 + EX28DRAFT_0742 0.73 -0.7 739,286 + EX28DRAFT_0742 0.73 -0.7 739,344 + EX28DRAFT_0742 0.79 -1.2 739,344 + EX28DRAFT_0742 0.79 +0.1 739,345 - EX28DRAFT_0742 0.79 +0.7 739,345 - EX28DRAFT_0742 0.79 +0.2 739,345 - EX28DRAFT_0742 0.79 -0.2 739,345 - EX28DRAFT_0742 0.79 -0.7 739,533 + -0.1 739,551 - +0.8 739,551 - +0.2 739,551 - +0.9 739,561 - +0.2 739,572 + +0.6 739,673 - -0.0 739,733 + +0.4 739,758 + -0.5 739,829 - -0.7 739,832 - +0.0 739,832 - +0.1 739,842 + +1.4 739,843 - -1.8 739,844 + -0.4 739,845 - -0.1 739,860 + -0.6 739,862 + +0.0 739,863 - -0.5 739,910 - -0.3 739,933 + +0.2 740,249 + EX28DRAFT_0743 0.15 +1.2 740,249 + EX28DRAFT_0743 0.15 +0.0 740,250 - EX28DRAFT_0743 0.15 -0.1 740,271 + EX28DRAFT_0743 0.17 -0.2 740,271 + EX28DRAFT_0743 0.17 -0.6 740,322 + EX28DRAFT_0743 0.20 +0.2 740,322 + EX28DRAFT_0743 0.20 -0.9 740,322 + EX28DRAFT_0743 0.20 +0.4 740,578 + EX28DRAFT_0743 0.36 +1.8 740,579 - EX28DRAFT_0743 0.37 +0.1 740,632 + EX28DRAFT_0743 0.40 -0.6 740,633 - EX28DRAFT_0743 0.40 +0.6 740,645 + EX28DRAFT_0743 0.41 +1.4 740,713 + EX28DRAFT_0743 0.45 -1.0 740,714 - EX28DRAFT_0743 0.45 -1.8 740,870 - EX28DRAFT_0743 0.55 +1.2 740,870 - EX28DRAFT_0743 0.55 +0.8 740,870 - EX28DRAFT_0743 0.55 +0.4 741,236 - EX28DRAFT_0743 0.79 +1.3 741,566 + -0.1 741,682 - -1.0 741,704 + +0.5 741,724 - -0.7 741,800 - EX28DRAFT_0744 0.14 -0.2 742,065 - EX28DRAFT_0744 0.31 -0.3 742,065 - EX28DRAFT_0744 0.31 -0.7 742,067 + EX28DRAFT_0744 0.31 +0.3 742,067 + EX28DRAFT_0744 0.31 +0.4 742,105 + EX28DRAFT_0744 0.33 -0.3 742,106 - EX28DRAFT_0744 0.33 -0.3 742,137 + EX28DRAFT_0744 0.35 +1.4 742,137 + EX28DRAFT_0744 0.35 +0.8 742,137 + EX28DRAFT_0744 0.35 -0.0 742,138 - EX28DRAFT_0744 0.35 +0.3 742,143 - EX28DRAFT_0744 0.36 +0.8 742,170 + EX28DRAFT_0744 0.37 -0.5 742,366 + EX28DRAFT_0744 0.49 +0.3 742,367 - EX28DRAFT_0744 0.50 -0.3 742,467 - EX28DRAFT_0744 0.56 +0.3
Or see this region's nucleotide sequence