Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21530 and CA264_21535 are separated by 239 nucleotides CA264_21535 and CA264_21540 overlap by 67 nucleotides CA264_21540 and CA264_21545 are separated by 125 nucleotides CA264_21545 and CA264_21550 are separated by 219 nucleotides CA264_21550 and CA264_21555 are separated by 85 nucleotides
CA264_21530: CA264_21530 - four-helix bundle copper-binding protein, at 176,477 to 176,794
_21530
CA264_21535: CA264_21535 - hypothetical protein, at 177,034 to 177,399
_21535
CA264_21540: CA264_21540 - hypothetical protein, at 177,333 to 177,509
_21540
CA264_21545: CA264_21545 - AraC family transcriptional regulator, at 177,635 to 177,823
_21545
CA264_21550: CA264_21550 - hypothetical protein, at 178,043 to 178,714
_21550
CA264_21555: CA264_21555 - phosphoribosylpyrophosphate synthetase, at 178,800 to 179,114
_21555
Position (kb) 177
178 Strain fitness (log2 ratio) -1
0
1
2
3 at 176.636 kb on + strand, within CA264_21530 at 176.636 kb on + strand, within CA264_21530 at 176.636 kb on + strand, within CA264_21530 at 176.640 kb on + strand, within CA264_21530 at 176.641 kb on - strand, within CA264_21530 at 176.662 kb on + strand, within CA264_21530 at 176.663 kb on - strand, within CA264_21530 at 176.742 kb on + strand, within CA264_21530 at 176.773 kb on + strand at 176.774 kb on - strand at 176.777 kb on + strand at 176.777 kb on + strand at 176.778 kb on - strand at 176.778 kb on - strand at 176.799 kb on - strand at 176.810 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.860 kb on - strand at 176.860 kb on - strand at 176.880 kb on + strand at 176.881 kb on - strand at 176.883 kb on + strand at 176.892 kb on + strand at 176.948 kb on + strand at 176.948 kb on + strand at 176.949 kb on - strand at 176.953 kb on + strand at 176.970 kb on - strand at 177.037 kb on + strand at 177.037 kb on + strand at 177.038 kb on - strand at 177.038 kb on - strand at 177.055 kb on + strand at 177.075 kb on + strand, within CA264_21535 at 177.095 kb on + strand, within CA264_21535 at 177.099 kb on + strand, within CA264_21535 at 177.099 kb on + strand, within CA264_21535 at 177.099 kb on + strand, within CA264_21535 at 177.142 kb on - strand, within CA264_21535 at 177.150 kb on - strand, within CA264_21535 at 177.183 kb on + strand, within CA264_21535 at 177.212 kb on + strand, within CA264_21535 at 177.234 kb on + strand, within CA264_21535 at 177.234 kb on + strand, within CA264_21535 at 177.235 kb on - strand, within CA264_21535 at 177.236 kb on + strand, within CA264_21535 at 177.236 kb on + strand, within CA264_21535 at 177.236 kb on + strand, within CA264_21535 at 177.240 kb on + strand, within CA264_21535 at 177.241 kb on - strand, within CA264_21535 at 177.363 kb on + strand at 177.364 kb on - strand at 177.364 kb on - strand at 177.419 kb on + strand, within CA264_21540 at 177.419 kb on + strand, within CA264_21540 at 177.419 kb on + strand, within CA264_21540 at 177.420 kb on - strand, within CA264_21540 at 177.424 kb on + strand, within CA264_21540 at 177.424 kb on + strand, within CA264_21540 at 177.425 kb on - strand, within CA264_21540 at 177.438 kb on - strand, within CA264_21540 at 177.463 kb on + strand, within CA264_21540 at 177.463 kb on + strand, within CA264_21540 at 177.533 kb on + strand at 177.541 kb on - strand at 177.541 kb on - strand at 177.557 kb on + strand at 177.557 kb on + strand at 177.634 kb on + strand at 177.634 kb on + strand at 177.635 kb on - strand at 177.635 kb on - strand at 177.635 kb on - strand at 177.686 kb on - strand, within CA264_21545 at 177.751 kb on + strand, within CA264_21545 at 177.773 kb on + strand, within CA264_21545 at 177.802 kb on + strand, within CA264_21545 at 177.803 kb on - strand, within CA264_21545 at 177.805 kb on + strand at 177.819 kb on - strand at 177.846 kb on + strand at 177.846 kb on + strand at 177.847 kb on - strand at 177.847 kb on - strand at 177.848 kb on + strand at 177.848 kb on + strand at 177.849 kb on - strand at 177.849 kb on - strand at 177.895 kb on - strand at 177.899 kb on + strand at 177.899 kb on + strand at 177.928 kb on + strand at 177.928 kb on + strand at 177.979 kb on - strand at 177.979 kb on - strand at 177.983 kb on - strand at 177.987 kb on - strand at 178.024 kb on + strand at 178.025 kb on - strand at 178.038 kb on + strand at 178.384 kb on - strand, within CA264_21550 at 178.393 kb on - strand, within CA264_21550 at 178.393 kb on - strand, within CA264_21550 at 178.395 kb on + strand, within CA264_21550 at 178.412 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.473 kb on + strand, within CA264_21550 at 178.493 kb on + strand, within CA264_21550 at 178.616 kb on + strand, within CA264_21550 at 178.617 kb on - strand, within CA264_21550 at 178.656 kb on + strand at 178.660 kb on + strand at 178.660 kb on + strand at 178.661 kb on - strand at 178.661 kb on - strand at 178.662 kb on + strand at 178.662 kb on + strand at 178.689 kb on - strand at 178.718 kb on - strand at 178.772 kb on - strand at 178.772 kb on - strand at 178.775 kb on + strand at 178.778 kb on - strand at 178.816 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 176,636 + CA264_21530 0.50 -0.0 176,636 + CA264_21530 0.50 +0.0 176,636 + CA264_21530 0.50 -0.8 176,640 + CA264_21530 0.51 -0.1 176,641 - CA264_21530 0.52 -1.0 176,662 + CA264_21530 0.58 +0.1 176,663 - CA264_21530 0.58 -1.0 176,742 + CA264_21530 0.83 +0.9 176,773 + -0.4 176,774 - -1.5 176,777 + -0.7 176,777 + -0.2 176,778 - +0.6 176,778 - +0.3 176,799 - -0.8 176,810 - +0.6 176,831 - -0.3 176,831 - -0.7 176,831 - +1.6 176,831 - +0.1 176,831 - -0.2 176,860 - +1.8 176,860 - +0.2 176,880 + +2.0 176,881 - -0.4 176,883 + +0.5 176,892 + +0.7 176,948 + +0.4 176,948 + +1.0 176,949 - -0.4 176,953 + +1.3 176,970 - +0.2 177,037 + -0.5 177,037 + +0.2 177,038 - +0.0 177,038 - -0.7 177,055 + +1.2 177,075 + CA264_21535 0.11 -0.3 177,095 + CA264_21535 0.17 +0.8 177,099 + CA264_21535 0.18 +0.0 177,099 + CA264_21535 0.18 +0.1 177,099 + CA264_21535 0.18 +0.2 177,142 - CA264_21535 0.30 -1.3 177,150 - CA264_21535 0.32 +0.5 177,183 + CA264_21535 0.41 -0.5 177,212 + CA264_21535 0.49 +0.3 177,234 + CA264_21535 0.55 +0.9 177,234 + CA264_21535 0.55 +0.2 177,235 - CA264_21535 0.55 -0.2 177,236 + CA264_21535 0.55 +0.2 177,236 + CA264_21535 0.55 +0.4 177,236 + CA264_21535 0.55 -0.2 177,240 + CA264_21535 0.56 +0.0 177,241 - CA264_21535 0.57 -1.7 177,363 + +0.2 177,364 - -0.9 177,364 - -0.7 177,419 + CA264_21540 0.49 +1.5 177,419 + CA264_21540 0.49 +0.5 177,419 + CA264_21540 0.49 -0.3 177,420 - CA264_21540 0.49 -0.8 177,424 + CA264_21540 0.51 +0.7 177,424 + CA264_21540 0.51 +0.2 177,425 - CA264_21540 0.52 +0.3 177,438 - CA264_21540 0.59 -0.4 177,463 + CA264_21540 0.73 +0.2 177,463 + CA264_21540 0.73 +0.6 177,533 + +1.7 177,541 - +0.2 177,541 - +0.2 177,557 + +0.6 177,557 + +1.9 177,634 + +1.0 177,634 + +2.8 177,635 - +0.3 177,635 - -0.7 177,635 - +0.5 177,686 - CA264_21545 0.27 +0.5 177,751 + CA264_21545 0.61 +2.4 177,773 + CA264_21545 0.73 +1.6 177,802 + CA264_21545 0.88 +2.0 177,803 - CA264_21545 0.89 +1.1 177,805 + +1.8 177,819 - +1.4 177,846 + -0.4 177,846 + -0.4 177,847 - +0.1 177,847 - -0.0 177,848 + -0.6 177,848 + -0.3 177,849 - -0.5 177,849 - +0.5 177,895 - +0.0 177,899 + +1.0 177,899 + +0.3 177,928 + -0.8 177,928 + -0.5 177,979 - +0.5 177,979 - -0.4 177,983 - -0.3 177,987 - -1.2 178,024 + +0.9 178,025 - -0.6 178,038 + +0.4 178,384 - CA264_21550 0.51 +1.0 178,393 - CA264_21550 0.52 +1.0 178,393 - CA264_21550 0.52 -0.6 178,395 + CA264_21550 0.52 -0.8 178,412 + CA264_21550 0.55 -0.1 178,415 + CA264_21550 0.55 -1.0 178,415 + CA264_21550 0.55 +0.3 178,415 + CA264_21550 0.55 +0.1 178,415 + CA264_21550 0.55 -0.5 178,415 + CA264_21550 0.55 -0.8 178,415 + CA264_21550 0.55 -0.2 178,416 - CA264_21550 0.56 -0.2 178,416 - CA264_21550 0.56 +0.7 178,416 - CA264_21550 0.56 -0.6 178,416 - CA264_21550 0.56 +0.0 178,473 + CA264_21550 0.64 -0.7 178,493 + CA264_21550 0.67 +0.1 178,616 + CA264_21550 0.85 -0.0 178,617 - CA264_21550 0.85 +1.1 178,656 + -0.8 178,660 + -0.9 178,660 + +1.1 178,661 - -0.8 178,661 - -1.3 178,662 + -0.5 178,662 + +0.7 178,689 - +0.5 178,718 - -0.3 178,772 - -0.9 178,772 - -0.3 178,775 + +0.3 178,778 - -1.0 178,816 - -0.5
Or see this region's nucleotide sequence