Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20755

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_20750 and CA264_20755 are separated by 103 nucleotidesCA264_20755 and CA264_20760 are separated by 240 nucleotides CA264_20750: CA264_20750 - metal transporter, at 9,884 to 11,164 _20750 CA264_20755: CA264_20755 - hypothetical protein, at 11,268 to 12,029 _20755 CA264_20760: CA264_20760 - hypothetical protein, at 12,270 to 13,040 _20760 CA264_20765: CA264_20765 - hypothetical protein, at 13,028 to 13,789 _20765 Position (kb) 11 12 13Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 10.283 kb on - strand, within CA264_20750at 10.351 kb on + strand, within CA264_20750at 10.417 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.443 kb on - strand, within CA264_20750at 10.443 kb on - strand, within CA264_20750at 10.443 kb on - strand, within CA264_20750at 10.444 kb on + strand, within CA264_20750at 10.485 kb on + strand, within CA264_20750at 10.486 kb on - strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.576 kb on - strand, within CA264_20750at 10.576 kb on - strand, within CA264_20750at 10.578 kb on + strand, within CA264_20750at 10.612 kb on - strand, within CA264_20750at 10.720 kb on - strand, within CA264_20750at 10.741 kb on - strand, within CA264_20750at 10.779 kb on - strand, within CA264_20750at 10.818 kb on + strand, within CA264_20750at 10.854 kb on + strand, within CA264_20750at 10.854 kb on + strand, within CA264_20750at 10.906 kb on + strand, within CA264_20750at 10.966 kb on - strand, within CA264_20750at 11.007 kb on + strand, within CA264_20750at 11.007 kb on + strand, within CA264_20750at 11.007 kb on + strand, within CA264_20750at 11.008 kb on - strand, within CA264_20750at 11.057 kb on + strandat 11.079 kb on + strandat 11.102 kb on + strandat 11.102 kb on + strandat 11.103 kb on - strandat 11.103 kb on - strandat 11.103 kb on - strandat 11.104 kb on + strandat 11.104 kb on + strandat 11.105 kb on - strandat 11.105 kb on - strandat 11.164 kb on + strandat 11.165 kb on - strandat 11.180 kb on + strandat 11.181 kb on - strandat 11.182 kb on + strandat 11.182 kb on + strandat 11.279 kb on + strandat 11.280 kb on - strandat 11.332 kb on - strandat 11.332 kb on - strandat 11.333 kb on + strandat 11.333 kb on + strandat 11.334 kb on - strandat 11.385 kb on - strand, within CA264_20755at 11.385 kb on - strand, within CA264_20755at 11.388 kb on + strand, within CA264_20755at 11.394 kb on + strand, within CA264_20755at 11.394 kb on + strand, within CA264_20755at 11.411 kb on + strand, within CA264_20755at 11.418 kb on - strand, within CA264_20755at 11.420 kb on + strand, within CA264_20755at 11.420 kb on + strand, within CA264_20755at 11.421 kb on - strand, within CA264_20755at 11.463 kb on + strand, within CA264_20755at 11.464 kb on - strand, within CA264_20755at 11.464 kb on - strand, within CA264_20755at 11.489 kb on + strand, within CA264_20755at 11.489 kb on + strand, within CA264_20755at 11.489 kb on + strand, within CA264_20755at 11.490 kb on - strand, within CA264_20755at 11.492 kb on - strand, within CA264_20755at 11.533 kb on + strand, within CA264_20755at 11.555 kb on + strand, within CA264_20755at 11.584 kb on - strand, within CA264_20755at 11.607 kb on - strand, within CA264_20755at 11.661 kb on + strand, within CA264_20755at 11.698 kb on - strand, within CA264_20755at 11.699 kb on + strand, within CA264_20755at 11.700 kb on - strand, within CA264_20755at 11.745 kb on - strand, within CA264_20755at 11.751 kb on - strand, within CA264_20755at 11.788 kb on + strand, within CA264_20755at 11.808 kb on - strand, within CA264_20755at 11.917 kb on + strand, within CA264_20755at 11.918 kb on - strand, within CA264_20755at 11.922 kb on + strand, within CA264_20755at 11.928 kb on + strand, within CA264_20755at 11.934 kb on + strand, within CA264_20755at 11.996 kb on + strandat 11.996 kb on + strandat 11.996 kb on + strandat 12.009 kb on + strandat 12.009 kb on + strandat 12.010 kb on - strandat 12.115 kb on + strandat 12.120 kb on - strandat 12.120 kb on - strandat 12.146 kb on - strandat 12.181 kb on + strandat 12.184 kb on - strandat 12.186 kb on + strandat 12.187 kb on - strandat 12.255 kb on + strandat 12.256 kb on - strandat 12.317 kb on + strandat 12.318 kb on - strandat 12.334 kb on + strandat 12.334 kb on + strandat 12.348 kb on + strand, within CA264_20760at 12.348 kb on + strand, within CA264_20760at 12.606 kb on - strand, within CA264_20760at 12.612 kb on + strand, within CA264_20760at 12.634 kb on - strand, within CA264_20760at 12.729 kb on + strand, within CA264_20760at 12.729 kb on + strand, within CA264_20760at 12.729 kb on + strand, within CA264_20760at 12.730 kb on - strand, within CA264_20760at 12.749 kb on + strand, within CA264_20760at 12.876 kb on - strand, within CA264_20760at 12.931 kb on - strand, within CA264_20760at 12.931 kb on - strand, within CA264_20760at 12.953 kb on + strand, within CA264_20760at 12.954 kb on - strand, within CA264_20760at 12.954 kb on - strand, within CA264_20760at 12.956 kb on + strand, within CA264_20760at 12.957 kb on - strand, within CA264_20760at 12.957 kb on - strand, within CA264_20760at 12.972 kb on - strandat 12.972 kb on - strandat 12.975 kb on - strandat 12.978 kb on + strandat 13.012 kb on - strandat 13.012 kb on - strandat 13.012 kb on - strandat 13.012 kb on - strandat 13.016 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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10,283 - CA264_20750 0.31 -0.7
10,351 + CA264_20750 0.36 -0.8
10,417 + CA264_20750 0.42 -1.0
10,419 + CA264_20750 0.42 -0.2
10,419 + CA264_20750 0.42 -1.5
10,419 + CA264_20750 0.42 +0.0
10,419 + CA264_20750 0.42 -0.3
10,443 - CA264_20750 0.44 -0.5
10,443 - CA264_20750 0.44 -0.1
10,443 - CA264_20750 0.44 +2.0
10,444 + CA264_20750 0.44 -0.3
10,485 + CA264_20750 0.47 +2.6
10,486 - CA264_20750 0.47 +0.2
10,575 + CA264_20750 0.54 -1.1
10,575 + CA264_20750 0.54 -0.5
10,575 + CA264_20750 0.54 -0.3
10,575 + CA264_20750 0.54 +0.9
10,576 - CA264_20750 0.54 +0.3
10,576 - CA264_20750 0.54 -2.9
10,578 + CA264_20750 0.54 +0.5
10,612 - CA264_20750 0.57 +1.7
10,720 - CA264_20750 0.65 -0.1
10,741 - CA264_20750 0.67 +0.5
10,779 - CA264_20750 0.70 -0.3
10,818 + CA264_20750 0.73 +0.4
10,854 + CA264_20750 0.76 -0.6
10,854 + CA264_20750 0.76 -1.7
10,906 + CA264_20750 0.80 +1.4
10,966 - CA264_20750 0.84 -0.8
11,007 + CA264_20750 0.88 -0.2
11,007 + CA264_20750 0.88 -1.3
11,007 + CA264_20750 0.88 -0.1
11,008 - CA264_20750 0.88 -0.8
11,057 + +0.8
11,079 + -0.1
11,102 + -0.2
11,102 + +1.0
11,103 - -0.8
11,103 - -0.2
11,103 - -1.2
11,104 + -0.3
11,104 + -0.2
11,105 - -0.2
11,105 - -1.6
11,164 + -0.2
11,165 - -0.5
11,180 + +0.0
11,181 - -1.3
11,182 + -0.3
11,182 + +0.7
11,279 + -0.1
11,280 - -0.1
11,332 - -2.1
11,332 - -0.1
11,333 + +0.2
11,333 + +0.5
11,334 - +0.0
11,385 - CA264_20755 0.15 -0.4
11,385 - CA264_20755 0.15 -0.5
11,388 + CA264_20755 0.16 +0.5
11,394 + CA264_20755 0.17 -0.5
11,394 + CA264_20755 0.17 +0.4
11,411 + CA264_20755 0.19 +0.4
11,418 - CA264_20755 0.20 -0.8
11,420 + CA264_20755 0.20 +0.6
11,420 + CA264_20755 0.20 +0.6
11,421 - CA264_20755 0.20 -1.1
11,463 + CA264_20755 0.26 +1.8
11,464 - CA264_20755 0.26 +0.0
11,464 - CA264_20755 0.26 -0.8
11,489 + CA264_20755 0.29 +0.2
11,489 + CA264_20755 0.29 -0.0
11,489 + CA264_20755 0.29 +1.1
11,490 - CA264_20755 0.29 -0.5
11,492 - CA264_20755 0.29 +1.7
11,533 + CA264_20755 0.35 +0.7
11,555 + CA264_20755 0.38 +1.0
11,584 - CA264_20755 0.41 -0.2
11,607 - CA264_20755 0.44 -1.2
11,661 + CA264_20755 0.52 +1.2
11,698 - CA264_20755 0.56 -1.6
11,699 + CA264_20755 0.57 -1.4
11,700 - CA264_20755 0.57 -1.3
11,745 - CA264_20755 0.63 -0.3
11,751 - CA264_20755 0.63 -0.4
11,788 + CA264_20755 0.68 -0.5
11,808 - CA264_20755 0.71 +0.2
11,917 + CA264_20755 0.85 +0.1
11,918 - CA264_20755 0.85 -0.7
11,922 + CA264_20755 0.86 +1.0
11,928 + CA264_20755 0.87 +0.2
11,934 + CA264_20755 0.87 -0.5
11,996 + -0.0
11,996 + +1.3
11,996 + -0.3
12,009 + -0.3
12,009 + -1.1
12,010 - -0.8
12,115 + -0.5
12,120 - -0.3
12,120 - +0.3
12,146 - -0.8
12,181 + +0.6
12,184 - -1.2
12,186 + -0.5
12,187 - -1.6
12,255 + +0.3
12,256 - +1.0
12,317 + +1.3
12,318 - -0.4
12,334 + +0.4
12,334 + +0.9
12,348 + CA264_20760 0.10 -0.6
12,348 + CA264_20760 0.10 -2.0
12,606 - CA264_20760 0.44 +0.8
12,612 + CA264_20760 0.44 +0.0
12,634 - CA264_20760 0.47 +0.2
12,729 + CA264_20760 0.60 -2.0
12,729 + CA264_20760 0.60 +0.2
12,729 + CA264_20760 0.60 +0.9
12,730 - CA264_20760 0.60 +0.8
12,749 + CA264_20760 0.62 +0.2
12,876 - CA264_20760 0.79 -0.1
12,931 - CA264_20760 0.86 -1.1
12,931 - CA264_20760 0.86 +0.9
12,953 + CA264_20760 0.89 -0.0
12,954 - CA264_20760 0.89 +0.5
12,954 - CA264_20760 0.89 -0.1
12,956 + CA264_20760 0.89 +0.5
12,957 - CA264_20760 0.89 +1.3
12,957 - CA264_20760 0.89 -0.2
12,972 - -0.4
12,972 - -0.8
12,975 - +1.5
12,978 + -0.4
13,012 - -0.4
13,012 - -0.2
13,012 - -0.2
13,012 - -0.8
13,016 + +0.2

Or see this region's nucleotide sequence