Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18340 and CA264_18345 are separated by 87 nucleotides CA264_18345 and CA264_18350 are separated by 76 nucleotides CA264_18350 and CA264_18355 are separated by 20 nucleotides CA264_18355 and CA264_18360 are separated by 26 nucleotides CA264_18360 and CA264_18365 are separated by 70 nucleotides
CA264_18340: CA264_18340 - dehydrogenase, at 4,263,618 to 4,265,597
_18340
CA264_18345: CA264_18345 - hypothetical protein, at 4,265,685 to 4,265,894
_18345
CA264_18350: CA264_18350 - hypothetical protein, at 4,265,971 to 4,266,297
_18350
CA264_18355: CA264_18355 - thioredoxin family protein, at 4,266,318 to 4,266,659
_18355
CA264_18360: CA264_18360 - osmotically inducible protein OsmC, at 4,266,686 to 4,267,093
_18360
CA264_18365: CA264_18365 - hypothetical protein, at 4,267,164 to 4,267,895
_18365
Position (kb)
4266
4267 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4265.424 kb on - strand at 4265.425 kb on + strand at 4265.593 kb on - strand at 4265.690 kb on + strand at 4265.692 kb on + strand at 4265.711 kb on + strand, within CA264_18345 at 4265.711 kb on + strand, within CA264_18345 at 4265.893 kb on - strand at 4266.109 kb on + strand, within CA264_18350 at 4266.110 kb on - strand, within CA264_18350 at 4266.139 kb on + strand, within CA264_18350 at 4266.140 kb on - strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.200 kb on - strand, within CA264_18350 at 4266.291 kb on + strand at 4266.295 kb on + strand at 4266.398 kb on + strand, within CA264_18355 at 4266.399 kb on - strand, within CA264_18355 at 4266.399 kb on - strand, within CA264_18355 at 4266.420 kb on - strand, within CA264_18355 at 4266.490 kb on - strand, within CA264_18355 at 4266.551 kb on - strand, within CA264_18355 at 4266.600 kb on + strand, within CA264_18355 at 4266.601 kb on - strand, within CA264_18355 at 4266.601 kb on - strand, within CA264_18355 at 4266.638 kb on + strand at 4266.638 kb on + strand at 4266.650 kb on - strand at 4266.650 kb on - strand at 4266.663 kb on + strand at 4266.694 kb on + strand at 4266.730 kb on + strand, within CA264_18360 at 4266.731 kb on - strand, within CA264_18360 at 4266.748 kb on + strand, within CA264_18360 at 4266.782 kb on - strand, within CA264_18360 at 4266.789 kb on + strand, within CA264_18360 at 4266.790 kb on - strand, within CA264_18360 at 4266.790 kb on - strand, within CA264_18360 at 4266.812 kb on - strand, within CA264_18360 at 4266.836 kb on - strand, within CA264_18360 at 4266.923 kb on - strand, within CA264_18360 at 4267.094 kb on - strand at 4267.097 kb on + strand at 4267.097 kb on + strand at 4267.098 kb on - strand at 4267.129 kb on + strand at 4267.133 kb on + strand at 4267.184 kb on + strand at 4267.187 kb on - strand at 4267.187 kb on - strand at 4267.266 kb on + strand, within CA264_18365 at 4267.267 kb on - strand, within CA264_18365 at 4267.329 kb on + strand, within CA264_18365 at 4267.330 kb on - strand, within CA264_18365 at 4267.347 kb on + strand, within CA264_18365 at 4267.348 kb on - strand, within CA264_18365 at 4267.401 kb on + strand, within CA264_18365 at 4267.404 kb on + strand, within CA264_18365 at 4267.450 kb on - strand, within CA264_18365 at 4267.525 kb on + strand, within CA264_18365 at 4267.543 kb on + strand, within CA264_18365 at 4267.575 kb on + strand, within CA264_18365 at 4267.575 kb on + strand, within CA264_18365 at 4267.576 kb on - strand, within CA264_18365 at 4267.576 kb on - strand, within CA264_18365 at 4267.576 kb on - strand, within CA264_18365 at 4267.576 kb on - strand, within CA264_18365 at 4267.584 kb on + strand, within CA264_18365 at 4267.585 kb on - strand, within CA264_18365 at 4267.587 kb on - strand, within CA264_18365 at 4267.590 kb on + strand, within CA264_18365 at 4267.591 kb on - strand, within CA264_18365 at 4267.657 kb on - strand, within CA264_18365 at 4267.657 kb on - strand, within CA264_18365
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 4,265,424 - -0.8 4,265,425 + -0.1 4,265,593 - +0.6 4,265,690 + +0.7 4,265,692 + +0.9 4,265,711 + CA264_18345 0.12 +0.9 4,265,711 + CA264_18345 0.12 +1.0 4,265,893 - -0.0 4,266,109 + CA264_18350 0.42 -0.0 4,266,110 - CA264_18350 0.43 -1.7 4,266,139 + CA264_18350 0.51 +1.8 4,266,140 - CA264_18350 0.52 +1.2 4,266,141 + CA264_18350 0.52 -0.7 4,266,141 + CA264_18350 0.52 -0.4 4,266,141 + CA264_18350 0.52 -0.9 4,266,142 - CA264_18350 0.52 -0.5 4,266,142 - CA264_18350 0.52 -0.7 4,266,142 - CA264_18350 0.52 +0.3 4,266,200 - CA264_18350 0.70 +0.2 4,266,291 + -0.8 4,266,295 + -0.6 4,266,398 + CA264_18355 0.23 +0.2 4,266,399 - CA264_18355 0.24 +1.2 4,266,399 - CA264_18355 0.24 +0.8 4,266,420 - CA264_18355 0.30 +0.3 4,266,490 - CA264_18355 0.50 +1.3 4,266,551 - CA264_18355 0.68 +0.9 4,266,600 + CA264_18355 0.82 -0.3 4,266,601 - CA264_18355 0.83 +1.5 4,266,601 - CA264_18355 0.83 -0.1 4,266,638 + -0.3 4,266,638 + +0.2 4,266,650 - +0.8 4,266,650 - +0.5 4,266,663 + -0.3 4,266,694 + +0.2 4,266,730 + CA264_18360 0.11 +0.7 4,266,731 - CA264_18360 0.11 +1.3 4,266,748 + CA264_18360 0.15 -0.5 4,266,782 - CA264_18360 0.24 +0.8 4,266,789 + CA264_18360 0.25 +1.6 4,266,790 - CA264_18360 0.25 +0.2 4,266,790 - CA264_18360 0.25 -1.7 4,266,812 - CA264_18360 0.31 +0.8 4,266,836 - CA264_18360 0.37 -0.5 4,266,923 - CA264_18360 0.58 -0.1 4,267,094 - -2.0 4,267,097 + +1.2 4,267,097 + +2.4 4,267,098 - -0.2 4,267,129 + +0.5 4,267,133 + -0.8 4,267,184 + -0.0 4,267,187 - +0.2 4,267,187 - -0.7 4,267,266 + CA264_18365 0.14 +0.6 4,267,267 - CA264_18365 0.14 -1.3 4,267,329 + CA264_18365 0.23 +0.6 4,267,330 - CA264_18365 0.23 -0.8 4,267,347 + CA264_18365 0.25 +0.2 4,267,348 - CA264_18365 0.25 -0.8 4,267,401 + CA264_18365 0.32 -0.4 4,267,404 + CA264_18365 0.33 +0.1 4,267,450 - CA264_18365 0.39 -0.4 4,267,525 + CA264_18365 0.49 +0.6 4,267,543 + CA264_18365 0.52 -0.0 4,267,575 + CA264_18365 0.56 +0.8 4,267,575 + CA264_18365 0.56 +0.3 4,267,576 - CA264_18365 0.56 -0.9 4,267,576 - CA264_18365 0.56 +0.2 4,267,576 - CA264_18365 0.56 +1.1 4,267,576 - CA264_18365 0.56 -0.2 4,267,584 + CA264_18365 0.57 +0.2 4,267,585 - CA264_18365 0.58 +0.9 4,267,587 - CA264_18365 0.58 +0.2 4,267,590 + CA264_18365 0.58 -0.1 4,267,591 - CA264_18365 0.58 -0.4 4,267,657 - CA264_18365 0.67 -0.3 4,267,657 - CA264_18365 0.67 -0.8
Or see this region's nucleotide sequence