Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17970 and CA264_17975 are separated by 162 nucleotides CA264_17975 and CA264_17980 are separated by 237 nucleotides
CA264_17970: CA264_17970 - hypothetical protein, at 4,176,175 to 4,177,713
_17970
CA264_17975: CA264_17975 - S9 family peptidase, at 4,177,876 to 4,180,110
_17975
CA264_17980: CA264_17980 - chloride channel protein, at 4,180,348 to 4,181,619
_17980
Position (kb)
4177
4178
4179
4180
4181 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4176.883 kb on + strand, within CA264_17970 at 4176.887 kb on + strand, within CA264_17970 at 4176.887 kb on + strand, within CA264_17970 at 4176.888 kb on - strand, within CA264_17970 at 4176.888 kb on - strand, within CA264_17970 at 4176.908 kb on + strand, within CA264_17970 at 4176.908 kb on + strand, within CA264_17970 at 4176.909 kb on - strand, within CA264_17970 at 4176.933 kb on + strand, within CA264_17970 at 4176.933 kb on + strand, within CA264_17970 at 4176.933 kb on + strand, within CA264_17970 at 4177.096 kb on + strand, within CA264_17970 at 4177.096 kb on + strand, within CA264_17970 at 4177.097 kb on - strand, within CA264_17970 at 4177.097 kb on - strand, within CA264_17970 at 4177.097 kb on - strand, within CA264_17970 at 4177.228 kb on + strand, within CA264_17970 at 4177.228 kb on + strand, within CA264_17970 at 4177.228 kb on + strand, within CA264_17970 at 4177.251 kb on + strand, within CA264_17970 at 4177.270 kb on + strand, within CA264_17970 at 4177.382 kb on - strand, within CA264_17970 at 4177.384 kb on - strand, within CA264_17970 at 4177.438 kb on + strand, within CA264_17970 at 4177.490 kb on - strand, within CA264_17970 at 4177.492 kb on - strand, within CA264_17970 at 4177.492 kb on - strand, within CA264_17970 at 4177.496 kb on - strand, within CA264_17970 at 4177.496 kb on - strand, within CA264_17970 at 4177.586 kb on + strand at 4177.587 kb on - strand at 4177.591 kb on + strand at 4177.591 kb on + strand at 4177.618 kb on + strand at 4177.788 kb on + strand at 4177.788 kb on + strand at 4177.788 kb on + strand at 4177.789 kb on - strand at 4177.790 kb on + strand at 4177.790 kb on + strand at 4177.791 kb on - strand at 4177.791 kb on - strand at 4177.831 kb on - strand at 4177.853 kb on - strand at 4177.881 kb on + strand at 4177.989 kb on + strand at 4178.041 kb on + strand at 4178.045 kb on - strand at 4178.045 kb on - strand at 4178.052 kb on + strand at 4178.052 kb on + strand at 4178.073 kb on + strand at 4178.073 kb on + strand at 4178.073 kb on + strand at 4178.073 kb on + strand at 4178.073 kb on + strand at 4178.074 kb on - strand at 4178.080 kb on + strand at 4178.081 kb on - strand at 4178.095 kb on + strand at 4178.096 kb on - strand at 4178.189 kb on - strand, within CA264_17975 at 4178.190 kb on + strand, within CA264_17975 at 4178.190 kb on + strand, within CA264_17975 at 4178.190 kb on + strand, within CA264_17975 at 4178.217 kb on - strand, within CA264_17975 at 4178.246 kb on - strand, within CA264_17975 at 4178.278 kb on + strand, within CA264_17975 at 4178.279 kb on - strand, within CA264_17975 at 4178.332 kb on + strand, within CA264_17975 at 4178.332 kb on + strand, within CA264_17975 at 4178.332 kb on + strand, within CA264_17975 at 4178.333 kb on - strand, within CA264_17975 at 4178.333 kb on - strand, within CA264_17975 at 4178.333 kb on - strand, within CA264_17975 at 4178.479 kb on + strand, within CA264_17975 at 4178.480 kb on - strand, within CA264_17975 at 4178.480 kb on - strand, within CA264_17975 at 4178.658 kb on - strand, within CA264_17975 at 4178.671 kb on + strand, within CA264_17975 at 4178.671 kb on + strand, within CA264_17975 at 4178.724 kb on + strand, within CA264_17975 at 4178.725 kb on - strand, within CA264_17975 at 4178.728 kb on + strand, within CA264_17975 at 4178.728 kb on + strand, within CA264_17975 at 4178.872 kb on + strand, within CA264_17975 at 4178.895 kb on + strand, within CA264_17975 at 4178.895 kb on + strand, within CA264_17975 at 4178.895 kb on + strand, within CA264_17975 at 4178.896 kb on - strand, within CA264_17975 at 4178.947 kb on + strand, within CA264_17975 at 4178.957 kb on + strand, within CA264_17975 at 4178.957 kb on + strand, within CA264_17975 at 4178.957 kb on + strand, within CA264_17975 at 4178.957 kb on + strand, within CA264_17975 at 4178.957 kb on + strand, within CA264_17975 at 4178.958 kb on - strand, within CA264_17975 at 4178.958 kb on - strand, within CA264_17975 at 4178.959 kb on + strand, within CA264_17975 at 4178.960 kb on - strand, within CA264_17975 at 4178.960 kb on - strand, within CA264_17975 at 4179.025 kb on + strand, within CA264_17975 at 4179.025 kb on + strand, within CA264_17975 at 4179.058 kb on + strand, within CA264_17975 at 4179.059 kb on - strand, within CA264_17975 at 4179.062 kb on - strand, within CA264_17975 at 4179.184 kb on - strand, within CA264_17975 at 4179.187 kb on + strand, within CA264_17975 at 4179.190 kb on + strand, within CA264_17975 at 4179.310 kb on + strand, within CA264_17975 at 4179.310 kb on + strand, within CA264_17975 at 4179.434 kb on - strand, within CA264_17975 at 4179.485 kb on - strand, within CA264_17975 at 4179.534 kb on - strand, within CA264_17975 at 4179.534 kb on - strand, within CA264_17975 at 4179.584 kb on - strand, within CA264_17975 at 4179.597 kb on + strand, within CA264_17975 at 4179.597 kb on + strand, within CA264_17975 at 4179.602 kb on - strand, within CA264_17975 at 4179.652 kb on + strand, within CA264_17975 at 4179.653 kb on - strand, within CA264_17975 at 4179.653 kb on - strand, within CA264_17975 at 4179.653 kb on - strand, within CA264_17975 at 4179.656 kb on + strand, within CA264_17975 at 4179.657 kb on - strand, within CA264_17975 at 4179.675 kb on + strand, within CA264_17975 at 4179.700 kb on + strand, within CA264_17975 at 4179.750 kb on + strand, within CA264_17975 at 4179.750 kb on + strand, within CA264_17975 at 4179.751 kb on - strand, within CA264_17975 at 4179.784 kb on + strand, within CA264_17975 at 4179.784 kb on + strand, within CA264_17975 at 4179.784 kb on + strand, within CA264_17975 at 4179.784 kb on + strand, within CA264_17975 at 4179.785 kb on - strand, within CA264_17975 at 4179.785 kb on - strand, within CA264_17975 at 4179.793 kb on - strand, within CA264_17975 at 4179.797 kb on - strand, within CA264_17975 at 4179.874 kb on - strand, within CA264_17975 at 4179.941 kb on + strand at 4179.942 kb on - strand at 4179.995 kb on - strand at 4180.018 kb on + strand at 4180.019 kb on - strand at 4180.034 kb on - strand at 4180.092 kb on + strand at 4180.109 kb on - strand at 4180.109 kb on - strand at 4180.112 kb on + strand at 4180.113 kb on - strand at 4180.113 kb on - strand at 4180.118 kb on + strand at 4180.119 kb on - strand at 4180.119 kb on - strand at 4180.119 kb on - strand at 4180.119 kb on - strand at 4180.119 kb on - strand at 4180.120 kb on + strand at 4180.120 kb on + strand at 4180.121 kb on - strand at 4180.164 kb on - strand at 4180.175 kb on - strand at 4180.179 kb on - strand at 4180.185 kb on + strand at 4180.262 kb on + strand at 4180.305 kb on + strand at 4180.305 kb on + strand at 4180.453 kb on - strand at 4180.526 kb on - strand, within CA264_17980 at 4180.676 kb on - strand, within CA264_17980 at 4180.676 kb on - strand, within CA264_17980 at 4180.677 kb on + strand, within CA264_17980 at 4180.767 kb on + strand, within CA264_17980 at 4180.767 kb on + strand, within CA264_17980 at 4180.767 kb on + strand, within CA264_17980 at 4180.767 kb on + strand, within CA264_17980 at 4180.802 kb on - strand, within CA264_17980 at 4180.805 kb on + strand, within CA264_17980 at 4180.896 kb on - strand, within CA264_17980 at 4180.937 kb on + strand, within CA264_17980 at 4180.937 kb on + strand, within CA264_17980 at 4180.938 kb on - strand, within CA264_17980 at 4180.938 kb on - strand, within CA264_17980 at 4180.971 kb on + strand, within CA264_17980 at 4180.972 kb on - strand, within CA264_17980 at 4180.993 kb on - strand, within CA264_17980 at 4181.058 kb on + strand, within CA264_17980 at 4181.058 kb on + strand, within CA264_17980 at 4181.068 kb on + strand, within CA264_17980 at 4181.068 kb on + strand, within CA264_17980 at 4181.068 kb on + strand, within CA264_17980 at 4181.069 kb on - strand, within CA264_17980 at 4181.069 kb on - strand, within CA264_17980
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 4,176,883 + CA264_17970 0.46 +0.3 4,176,887 + CA264_17970 0.46 -0.4 4,176,887 + CA264_17970 0.46 -1.0 4,176,888 - CA264_17970 0.46 -0.8 4,176,888 - CA264_17970 0.46 -0.1 4,176,908 + CA264_17970 0.48 +0.6 4,176,908 + CA264_17970 0.48 +0.4 4,176,909 - CA264_17970 0.48 +0.1 4,176,933 + CA264_17970 0.49 +0.1 4,176,933 + CA264_17970 0.49 -0.1 4,176,933 + CA264_17970 0.49 -1.4 4,177,096 + CA264_17970 0.60 -1.2 4,177,096 + CA264_17970 0.60 -1.9 4,177,097 - CA264_17970 0.60 +0.7 4,177,097 - CA264_17970 0.60 +0.6 4,177,097 - CA264_17970 0.60 +0.1 4,177,228 + CA264_17970 0.68 +1.9 4,177,228 + CA264_17970 0.68 +2.2 4,177,228 + CA264_17970 0.68 -0.9 4,177,251 + CA264_17970 0.70 +1.2 4,177,270 + CA264_17970 0.71 -0.6 4,177,382 - CA264_17970 0.78 +0.6 4,177,384 - CA264_17970 0.79 +1.2 4,177,438 + CA264_17970 0.82 +0.8 4,177,490 - CA264_17970 0.85 -1.1 4,177,492 - CA264_17970 0.86 -0.7 4,177,492 - CA264_17970 0.86 -0.2 4,177,496 - CA264_17970 0.86 -0.5 4,177,496 - CA264_17970 0.86 -0.2 4,177,586 + +0.4 4,177,587 - -0.6 4,177,591 + -1.8 4,177,591 + +1.6 4,177,618 + -0.9 4,177,788 + +0.5 4,177,788 + -0.1 4,177,788 + +1.4 4,177,789 - -0.8 4,177,790 + +0.6 4,177,790 + +0.2 4,177,791 - +0.1 4,177,791 - -0.7 4,177,831 - +0.3 4,177,853 - -1.7 4,177,881 + +0.0 4,177,989 + -1.0 4,178,041 + +1.1 4,178,045 - -0.9 4,178,045 - -0.8 4,178,052 + -1.6 4,178,052 + -1.1 4,178,073 + -1.3 4,178,073 + -1.0 4,178,073 + -2.2 4,178,073 + +0.8 4,178,073 + -1.4 4,178,074 - -1.5 4,178,080 + +1.0 4,178,081 - -1.5 4,178,095 + -2.0 4,178,096 - -1.3 4,178,189 - CA264_17975 0.14 -1.3 4,178,190 + CA264_17975 0.14 -0.1 4,178,190 + CA264_17975 0.14 -2.8 4,178,190 + CA264_17975 0.14 -1.3 4,178,217 - CA264_17975 0.15 -1.0 4,178,246 - CA264_17975 0.17 +1.2 4,178,278 + CA264_17975 0.18 +0.4 4,178,279 - CA264_17975 0.18 -1.3 4,178,332 + CA264_17975 0.20 -0.3 4,178,332 + CA264_17975 0.20 +1.6 4,178,332 + CA264_17975 0.20 -1.4 4,178,333 - CA264_17975 0.20 +0.1 4,178,333 - CA264_17975 0.20 -1.9 4,178,333 - CA264_17975 0.20 -0.1 4,178,479 + CA264_17975 0.27 -0.1 4,178,480 - CA264_17975 0.27 -0.5 4,178,480 - CA264_17975 0.27 -0.2 4,178,658 - CA264_17975 0.35 -0.5 4,178,671 + CA264_17975 0.36 -2.0 4,178,671 + CA264_17975 0.36 +0.1 4,178,724 + CA264_17975 0.38 -0.1 4,178,725 - CA264_17975 0.38 +0.5 4,178,728 + CA264_17975 0.38 -1.0 4,178,728 + CA264_17975 0.38 -0.6 4,178,872 + CA264_17975 0.45 -1.2 4,178,895 + CA264_17975 0.46 -0.5 4,178,895 + CA264_17975 0.46 -1.4 4,178,895 + CA264_17975 0.46 -0.4 4,178,896 - CA264_17975 0.46 -0.9 4,178,947 + CA264_17975 0.48 -1.1 4,178,957 + CA264_17975 0.48 -0.8 4,178,957 + CA264_17975 0.48 +0.2 4,178,957 + CA264_17975 0.48 -1.8 4,178,957 + CA264_17975 0.48 -0.5 4,178,957 + CA264_17975 0.48 -0.6 4,178,958 - CA264_17975 0.48 -2.0 4,178,958 - CA264_17975 0.48 -1.2 4,178,959 + CA264_17975 0.48 -1.0 4,178,960 - CA264_17975 0.49 -1.4 4,178,960 - CA264_17975 0.49 -0.6 4,179,025 + CA264_17975 0.51 -1.4 4,179,025 + CA264_17975 0.51 -1.9 4,179,058 + CA264_17975 0.53 -1.0 4,179,059 - CA264_17975 0.53 -1.3 4,179,062 - CA264_17975 0.53 -0.7 4,179,184 - CA264_17975 0.59 -0.6 4,179,187 + CA264_17975 0.59 +0.1 4,179,190 + CA264_17975 0.59 +0.6 4,179,310 + CA264_17975 0.64 -0.7 4,179,310 + CA264_17975 0.64 -0.9 4,179,434 - CA264_17975 0.70 -0.9 4,179,485 - CA264_17975 0.72 -0.1 4,179,534 - CA264_17975 0.74 -0.2 4,179,534 - CA264_17975 0.74 -0.1 4,179,584 - CA264_17975 0.76 -1.3 4,179,597 + CA264_17975 0.77 +2.2 4,179,597 + CA264_17975 0.77 +0.9 4,179,602 - CA264_17975 0.77 +1.2 4,179,652 + CA264_17975 0.79 -1.3 4,179,653 - CA264_17975 0.80 +0.1 4,179,653 - CA264_17975 0.80 -0.1 4,179,653 - CA264_17975 0.80 -0.0 4,179,656 + CA264_17975 0.80 +0.4 4,179,657 - CA264_17975 0.80 +0.3 4,179,675 + CA264_17975 0.80 -1.9 4,179,700 + CA264_17975 0.82 -1.7 4,179,750 + CA264_17975 0.84 -0.1 4,179,750 + CA264_17975 0.84 +0.6 4,179,751 - CA264_17975 0.84 -0.6 4,179,784 + CA264_17975 0.85 -3.9 4,179,784 + CA264_17975 0.85 -0.8 4,179,784 + CA264_17975 0.85 -1.2 4,179,784 + CA264_17975 0.85 -0.9 4,179,785 - CA264_17975 0.85 -0.5 4,179,785 - CA264_17975 0.85 +0.2 4,179,793 - CA264_17975 0.86 -1.3 4,179,797 - CA264_17975 0.86 +0.1 4,179,874 - CA264_17975 0.89 -1.8 4,179,941 + +0.1 4,179,942 - -1.1 4,179,995 - -0.3 4,180,018 + -2.4 4,180,019 - -1.3 4,180,034 - +0.4 4,180,092 + -0.9 4,180,109 - -0.9 4,180,109 - -1.2 4,180,112 + -1.1 4,180,113 - -1.9 4,180,113 - -0.8 4,180,118 + -1.2 4,180,119 - -0.2 4,180,119 - -1.4 4,180,119 - +0.7 4,180,119 - -0.7 4,180,119 - -1.4 4,180,120 + -0.5 4,180,120 + -1.4 4,180,121 - -0.3 4,180,164 - +0.4 4,180,175 - -2.9 4,180,179 - +0.2 4,180,185 + -1.4 4,180,262 + +0.3 4,180,305 + -0.7 4,180,305 + -0.5 4,180,453 - -0.8 4,180,526 - CA264_17980 0.14 +0.1 4,180,676 - CA264_17980 0.26 -0.1 4,180,676 - CA264_17980 0.26 +0.9 4,180,677 + CA264_17980 0.26 +0.5 4,180,767 + CA264_17980 0.33 -0.4 4,180,767 + CA264_17980 0.33 -0.2 4,180,767 + CA264_17980 0.33 -1.0 4,180,767 + CA264_17980 0.33 +0.2 4,180,802 - CA264_17980 0.36 +0.1 4,180,805 + CA264_17980 0.36 -0.6 4,180,896 - CA264_17980 0.43 -1.0 4,180,937 + CA264_17980 0.46 -2.3 4,180,937 + CA264_17980 0.46 +0.3 4,180,938 - CA264_17980 0.46 +1.6 4,180,938 - CA264_17980 0.46 -0.4 4,180,971 + CA264_17980 0.49 +0.6 4,180,972 - CA264_17980 0.49 -0.9 4,180,993 - CA264_17980 0.51 +0.3 4,181,058 + CA264_17980 0.56 -0.2 4,181,058 + CA264_17980 0.56 -0.1 4,181,068 + CA264_17980 0.57 +0.9 4,181,068 + CA264_17980 0.57 -0.2 4,181,068 + CA264_17980 0.57 -0.1 4,181,069 - CA264_17980 0.57 +0.3 4,181,069 - CA264_17980 0.57 -0.2
Or see this region's nucleotide sequence