Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17955

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_17950 and CA264_17955 are separated by 10 nucleotidesCA264_17955 and CA264_17960 are separated by 194 nucleotides CA264_17950: CA264_17950 - hypothetical protein, at 4,171,623 to 4,172,615 _17950 CA264_17955: CA264_17955 - hypothetical protein, at 4,172,626 to 4,173,099 _17955 CA264_17960: CA264_17960 - proline--tRNA ligase, at 4,173,294 to 4,174,772 _17960 Position (kb) 4172 4173 4174Strain fitness (log2 ratio) -1 0 1 2at 4171.640 kb on + strandat 4171.720 kb on + strandat 4171.720 kb on + strandat 4171.731 kb on - strand, within CA264_17950at 4171.798 kb on - strand, within CA264_17950at 4171.888 kb on - strand, within CA264_17950at 4171.888 kb on - strand, within CA264_17950at 4171.962 kb on - strand, within CA264_17950at 4171.966 kb on - strand, within CA264_17950at 4171.982 kb on - strand, within CA264_17950at 4172.010 kb on + strand, within CA264_17950at 4172.145 kb on + strand, within CA264_17950at 4172.316 kb on + strand, within CA264_17950at 4172.557 kb on - strandat 4172.619 kb on + strandat 4172.620 kb on - strandat 4172.620 kb on - strandat 4172.620 kb on - strandat 4172.620 kb on - strandat 4172.622 kb on - strandat 4172.628 kb on - strandat 4172.641 kb on + strandat 4172.652 kb on + strandat 4172.653 kb on - strandat 4172.700 kb on - strand, within CA264_17955at 4172.724 kb on - strand, within CA264_17955at 4172.821 kb on + strand, within CA264_17955at 4172.882 kb on + strand, within CA264_17955at 4172.924 kb on - strand, within CA264_17955at 4172.924 kb on - strand, within CA264_17955at 4172.987 kb on - strand, within CA264_17955at 4173.038 kb on - strand, within CA264_17955at 4173.075 kb on + strandat 4173.076 kb on - strandat 4173.095 kb on - strandat 4173.100 kb on - strandat 4173.100 kb on - strandat 4173.102 kb on + strandat 4173.121 kb on - strandat 4173.125 kb on - strandat 4173.125 kb on - strandat 4173.125 kb on - strandat 4173.127 kb on - strandat 4173.154 kb on - strandat 4173.247 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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4,171,640 + +0.1
4,171,720 + +1.5
4,171,720 + +1.1
4,171,731 - CA264_17950 0.11 +2.6
4,171,798 - CA264_17950 0.18 -0.5
4,171,888 - CA264_17950 0.27 +0.2
4,171,888 - CA264_17950 0.27 -0.8
4,171,962 - CA264_17950 0.34 -0.2
4,171,966 - CA264_17950 0.35 -1.3
4,171,982 - CA264_17950 0.36 +0.6
4,172,010 + CA264_17950 0.39 +1.1
4,172,145 + CA264_17950 0.53 +0.1
4,172,316 + CA264_17950 0.70 -0.4
4,172,557 - -0.1
4,172,619 + +0.7
4,172,620 - +0.1
4,172,620 - -0.9
4,172,620 - -1.1
4,172,620 - -0.1
4,172,622 - -0.2
4,172,628 - +0.7
4,172,641 + -0.2
4,172,652 + +0.9
4,172,653 - +1.4
4,172,700 - CA264_17955 0.16 +0.0
4,172,724 - CA264_17955 0.21 +1.5
4,172,821 + CA264_17955 0.41 +1.0
4,172,882 + CA264_17955 0.54 +0.6
4,172,924 - CA264_17955 0.63 +0.1
4,172,924 - CA264_17955 0.63 -0.0
4,172,987 - CA264_17955 0.76 +2.6
4,173,038 - CA264_17955 0.87 +1.6
4,173,075 + +0.2
4,173,076 - -0.5
4,173,095 - +0.8
4,173,100 - -0.1
4,173,100 - -0.8
4,173,102 + +0.4
4,173,121 - +0.4
4,173,125 - -0.1
4,173,125 - +1.0
4,173,125 - +0.1
4,173,127 - +0.9
4,173,154 - +0.1
4,173,247 - +0.1

Or see this region's nucleotide sequence