Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17630

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_17625 and CA264_17630 overlap by 17 nucleotidesCA264_17630 and CA264_17635 are separated by 9 nucleotidesCA264_17635 and CA264_17640 are separated by 224 nucleotides CA264_17625: CA264_17625 - TIGR00374 family protein, at 4,104,605 to 4,105,651 _17625 CA264_17630: CA264_17630 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 4,105,635 to 4,106,132 _17630 CA264_17635: CA264_17635 - hypothetical protein, at 4,106,142 to 4,106,822 _17635 CA264_17640: CA264_17640 - acyl-CoA dehydrogenase, at 4,107,047 to 4,108,186 _17640 Position (kb) 4105 4106 4107Strain fitness (log2 ratio) -1 0 1 2 3 4at 4106.119 kb on + strandat 4106.135 kb on + strandat 4106.136 kb on - strandat 4106.154 kb on + strandat 4106.155 kb on - strandat 4106.155 kb on - strandat 4106.159 kb on + strandat 4106.186 kb on + strandat 4106.226 kb on + strand, within CA264_17635at 4106.308 kb on + strand, within CA264_17635at 4106.308 kb on + strand, within CA264_17635at 4106.308 kb on + strand, within CA264_17635at 4106.309 kb on - strand, within CA264_17635at 4106.314 kb on + strand, within CA264_17635at 4106.314 kb on + strand, within CA264_17635at 4106.315 kb on - strand, within CA264_17635at 4106.346 kb on + strand, within CA264_17635at 4106.383 kb on - strand, within CA264_17635at 4106.388 kb on + strand, within CA264_17635at 4106.463 kb on + strand, within CA264_17635at 4106.463 kb on + strand, within CA264_17635at 4106.557 kb on + strand, within CA264_17635at 4106.606 kb on + strand, within CA264_17635at 4106.748 kb on + strand, within CA264_17635at 4106.748 kb on + strand, within CA264_17635at 4106.748 kb on + strand, within CA264_17635at 4106.787 kb on + strandat 4106.787 kb on + strandat 4106.787 kb on + strandat 4106.787 kb on + strandat 4106.787 kb on + strandat 4106.788 kb on - strandat 4106.790 kb on + strandat 4106.790 kb on + strandat 4106.794 kb on + strandat 4106.795 kb on - strandat 4106.820 kb on + strandat 4106.833 kb on - strandat 4106.927 kb on - strandat 4106.953 kb on + strandat 4107.040 kb on - strandat 4107.046 kb on + strandat 4107.046 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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4,106,119 + +0.1
4,106,135 + -0.9
4,106,136 - +4.3
4,106,154 + -0.0
4,106,155 - +3.8
4,106,155 - +3.2
4,106,159 + +0.2
4,106,186 + -0.4
4,106,226 + CA264_17635 0.12 -0.8
4,106,308 + CA264_17635 0.24 -0.4
4,106,308 + CA264_17635 0.24 -0.3
4,106,308 + CA264_17635 0.24 -1.5
4,106,309 - CA264_17635 0.25 +3.4
4,106,314 + CA264_17635 0.25 -1.1
4,106,314 + CA264_17635 0.25 +0.4
4,106,315 - CA264_17635 0.25 +3.5
4,106,346 + CA264_17635 0.30 -0.8
4,106,383 - CA264_17635 0.35 +2.4
4,106,388 + CA264_17635 0.36 +0.2
4,106,463 + CA264_17635 0.47 +0.1
4,106,463 + CA264_17635 0.47 -0.5
4,106,557 + CA264_17635 0.61 +0.4
4,106,606 + CA264_17635 0.68 -1.6
4,106,748 + CA264_17635 0.89 -0.7
4,106,748 + CA264_17635 0.89 -0.5
4,106,748 + CA264_17635 0.89 +0.4
4,106,787 + -0.4
4,106,787 + -1.1
4,106,787 + +0.6
4,106,787 + -0.7
4,106,787 + -1.2
4,106,788 - +2.5
4,106,790 + +0.2
4,106,790 + +0.6
4,106,794 + -0.2
4,106,795 - +2.6
4,106,820 + -0.8
4,106,833 - +1.9
4,106,927 - +1.2
4,106,953 + -1.1
4,107,040 - +0.5
4,107,046 + +0.4
4,107,046 + -0.1

Or see this region's nucleotide sequence