Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17475 and CA264_17480 are separated by 134 nucleotides CA264_17480 and CA264_17485 are separated by 118 nucleotides CA264_17485 and CA264_17490 are separated by 158 nucleotides
CA264_17475: CA264_17475 - DNA replication and repair protein RecF, at 4,072,342 to 4,073,454
_17475
CA264_17480: CA264_17480 - pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha, at 4,073,589 to 4,074,635
_17480
CA264_17485: CA264_17485 - cytochrome C biosynthesis protein, at 4,074,754 to 4,075,473
_17485
CA264_17490: CA264_17490 - 6,7-dimethyl-8-ribityllumazine synthase, at 4,075,632 to 4,076,108
_17490
Position (kb)
4073
4074
4075 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4072.610 kb on + strand, within CA264_17475 at 4072.778 kb on + strand, within CA264_17475 at 4072.789 kb on + strand, within CA264_17475 at 4072.820 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.989 kb on - strand, within CA264_17475 at 4073.201 kb on - strand, within CA264_17475 at 4073.321 kb on + strand, within CA264_17475 at 4073.383 kb on - strand at 4073.414 kb on + strand at 4073.439 kb on + strand at 4073.464 kb on - strand at 4073.496 kb on + strand at 4073.514 kb on + strand at 4073.516 kb on + strand at 4073.552 kb on - strand at 4073.554 kb on - strand at 4073.582 kb on - strand at 4074.061 kb on + strand, within CA264_17480 at 4074.694 kb on + strand at 4074.707 kb on + strand at 4074.707 kb on + strand at 4074.724 kb on + strand at 4074.743 kb on + strand at 4074.743 kb on + strand at 4074.749 kb on + strand at 4075.390 kb on + strand, within CA264_17485 at 4075.427 kb on - strand at 4075.427 kb on - strand at 4075.429 kb on - strand at 4075.472 kb on - strand at 4075.493 kb on + strand at 4075.494 kb on - strand at 4075.494 kb on - strand at 4075.578 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 4,072,610 + CA264_17475 0.24 +1.7 4,072,778 + CA264_17475 0.39 -2.9 4,072,789 + CA264_17475 0.40 -1.0 4,072,820 + CA264_17475 0.43 -1.0 4,072,988 + CA264_17475 0.58 +0.7 4,072,988 + CA264_17475 0.58 +0.0 4,072,988 + CA264_17475 0.58 -0.4 4,072,989 - CA264_17475 0.58 -0.3 4,073,201 - CA264_17475 0.77 +1.0 4,073,321 + CA264_17475 0.88 +0.1 4,073,383 - -0.0 4,073,414 + +0.1 4,073,439 + +0.5 4,073,464 - +2.2 4,073,496 + +0.4 4,073,514 + -0.2 4,073,516 + -0.3 4,073,552 - +2.2 4,073,554 - +2.6 4,073,582 - +2.2 4,074,061 + CA264_17480 0.45 +0.1 4,074,694 + +1.0 4,074,707 + -0.8 4,074,707 + -0.4 4,074,724 + +1.8 4,074,743 + +0.2 4,074,743 + +0.6 4,074,749 + +0.4 4,075,390 + CA264_17485 0.88 +0.5 4,075,427 - +1.0 4,075,427 - +1.2 4,075,429 - +2.0 4,075,472 - +3.0 4,075,493 + -0.9 4,075,494 - +2.6 4,075,494 - -0.2 4,075,578 - +1.3
Or see this region's nucleotide sequence