Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15730

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15725 and CA264_15730 are separated by 90 nucleotidesCA264_15730 and CA264_15735 are separated by 86 nucleotides CA264_15725: CA264_15725 - polyphosphate kinase 1, at 3,670,138 to 3,672,252 _15725 CA264_15730: CA264_15730 - hypothetical protein, at 3,672,343 to 3,673,368 _15730 CA264_15735: CA264_15735 - hypothetical protein, at 3,673,455 to 3,677,234 _15735 Position (kb) 3672 3673 3674Strain fitness (log2 ratio) -2 -1 0 1at 3671.399 kb on - strand, within CA264_15725at 3671.436 kb on - strand, within CA264_15725at 3671.448 kb on - strand, within CA264_15725at 3671.562 kb on - strand, within CA264_15725at 3671.583 kb on + strand, within CA264_15725at 3671.715 kb on - strand, within CA264_15725at 3671.726 kb on + strand, within CA264_15725at 3671.809 kb on + strand, within CA264_15725at 3671.810 kb on - strand, within CA264_15725at 3671.900 kb on + strand, within CA264_15725at 3671.901 kb on - strand, within CA264_15725at 3671.901 kb on - strand, within CA264_15725at 3671.901 kb on - strand, within CA264_15725at 3672.046 kb on + strandat 3672.154 kb on - strandat 3672.173 kb on - strandat 3672.173 kb on - strandat 3672.187 kb on + strandat 3672.250 kb on + strandat 3672.255 kb on + strandat 3672.255 kb on + strandat 3672.296 kb on - strandat 3672.301 kb on - strandat 3672.304 kb on + strandat 3672.304 kb on + strandat 3672.305 kb on - strandat 3672.305 kb on - strandat 3672.383 kb on + strandat 3672.384 kb on - strandat 3672.397 kb on + strandat 3672.398 kb on - strandat 3672.402 kb on - strandat 3672.431 kb on - strandat 3672.431 kb on - strandat 3672.476 kb on + strand, within CA264_15730at 3672.477 kb on - strand, within CA264_15730at 3672.477 kb on - strand, within CA264_15730at 3672.585 kb on + strand, within CA264_15730at 3672.617 kb on + strand, within CA264_15730at 3672.617 kb on + strand, within CA264_15730at 3672.617 kb on + strand, within CA264_15730at 3672.774 kb on - strand, within CA264_15730at 3672.778 kb on - strand, within CA264_15730at 3672.809 kb on + strand, within CA264_15730at 3672.809 kb on + strand, within CA264_15730at 3672.873 kb on + strand, within CA264_15730at 3673.007 kb on + strand, within CA264_15730at 3673.060 kb on - strand, within CA264_15730at 3673.061 kb on + strand, within CA264_15730at 3673.061 kb on + strand, within CA264_15730at 3673.062 kb on - strand, within CA264_15730at 3673.131 kb on + strand, within CA264_15730at 3673.132 kb on - strand, within CA264_15730at 3673.134 kb on + strand, within CA264_15730at 3673.134 kb on + strand, within CA264_15730at 3673.135 kb on - strand, within CA264_15730at 3673.135 kb on - strand, within CA264_15730at 3673.271 kb on + strandat 3673.271 kb on + strandat 3673.279 kb on + strandat 3673.291 kb on - strandat 3673.291 kb on - strandat 3673.291 kb on - strandat 3673.327 kb on + strandat 3673.375 kb on - strandat 3673.433 kb on - strandat 3673.435 kb on - strandat 3673.440 kb on + strandat 3673.441 kb on - strandat 3673.451 kb on + strandat 3673.598 kb on + strandat 3673.665 kb on + strandat 3673.666 kb on - strandat 3673.815 kb on - strandat 3673.903 kb on + strand, within CA264_15735at 3673.904 kb on - strand, within CA264_15735at 3673.924 kb on - strand, within CA264_15735at 3673.936 kb on + strand, within CA264_15735at 3673.936 kb on + strand, within CA264_15735at 3674.035 kb on + strand, within CA264_15735at 3674.036 kb on - strand, within CA264_15735at 3674.071 kb on + strand, within CA264_15735at 3674.071 kb on + strand, within CA264_15735at 3674.071 kb on + strand, within CA264_15735at 3674.071 kb on + strand, within CA264_15735at 3674.071 kb on + strand, within CA264_15735at 3674.071 kb on + strand, within CA264_15735at 3674.072 kb on - strand, within CA264_15735at 3674.156 kb on - strand, within CA264_15735at 3674.242 kb on + strand, within CA264_15735at 3674.245 kb on + strand, within CA264_15735at 3674.245 kb on + strand, within CA264_15735at 3674.286 kb on + strand, within CA264_15735at 3674.368 kb on - strand, within CA264_15735

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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3,671,399 - CA264_15725 0.60 -0.1
3,671,436 - CA264_15725 0.61 +0.5
3,671,448 - CA264_15725 0.62 -1.8
3,671,562 - CA264_15725 0.67 -0.7
3,671,583 + CA264_15725 0.68 -0.3
3,671,715 - CA264_15725 0.75 -1.5
3,671,726 + CA264_15725 0.75 +1.1
3,671,809 + CA264_15725 0.79 -0.5
3,671,810 - CA264_15725 0.79 -0.8
3,671,900 + CA264_15725 0.83 -1.2
3,671,901 - CA264_15725 0.83 -0.8
3,671,901 - CA264_15725 0.83 +0.3
3,671,901 - CA264_15725 0.83 -0.1
3,672,046 + -0.1
3,672,154 - -1.8
3,672,173 - +0.5
3,672,173 - +1.1
3,672,187 + +0.1
3,672,250 + -0.6
3,672,255 + -0.2
3,672,255 + -0.2
3,672,296 - +1.3
3,672,301 - -0.7
3,672,304 + +0.7
3,672,304 + -0.7
3,672,305 - +0.2
3,672,305 - +0.4
3,672,383 + -0.2
3,672,384 - +0.4
3,672,397 + -0.2
3,672,398 - -1.1
3,672,402 - -0.1
3,672,431 - -1.3
3,672,431 - -0.1
3,672,476 + CA264_15730 0.13 -0.1
3,672,477 - CA264_15730 0.13 +0.4
3,672,477 - CA264_15730 0.13 +0.1
3,672,585 + CA264_15730 0.24 +0.2
3,672,617 + CA264_15730 0.27 -0.1
3,672,617 + CA264_15730 0.27 -0.1
3,672,617 + CA264_15730 0.27 -0.2
3,672,774 - CA264_15730 0.42 +0.5
3,672,778 - CA264_15730 0.42 +1.1
3,672,809 + CA264_15730 0.45 -1.7
3,672,809 + CA264_15730 0.45 +0.9
3,672,873 + CA264_15730 0.52 +0.2
3,673,007 + CA264_15730 0.65 +1.1
3,673,060 - CA264_15730 0.70 -0.6
3,673,061 + CA264_15730 0.70 -0.4
3,673,061 + CA264_15730 0.70 +1.6
3,673,062 - CA264_15730 0.70 -0.5
3,673,131 + CA264_15730 0.77 +0.3
3,673,132 - CA264_15730 0.77 +0.5
3,673,134 + CA264_15730 0.77 +0.2
3,673,134 + CA264_15730 0.77 -0.1
3,673,135 - CA264_15730 0.77 +0.8
3,673,135 - CA264_15730 0.77 -0.2
3,673,271 + -0.1
3,673,271 + -0.3
3,673,279 + +0.5
3,673,291 - +0.3
3,673,291 - -0.5
3,673,291 - +0.1
3,673,327 + -1.6
3,673,375 - -0.8
3,673,433 - +0.5
3,673,435 - -0.7
3,673,440 + -1.1
3,673,441 - -1.1
3,673,451 + -0.2
3,673,598 + -0.2
3,673,665 + +0.5
3,673,666 - -0.8
3,673,815 - -0.7
3,673,903 + CA264_15735 0.12 -1.3
3,673,904 - CA264_15735 0.12 -0.1
3,673,924 - CA264_15735 0.12 -0.7
3,673,936 + CA264_15735 0.13 -0.6
3,673,936 + CA264_15735 0.13 -0.0
3,674,035 + CA264_15735 0.15 +0.3
3,674,036 - CA264_15735 0.15 -0.8
3,674,071 + CA264_15735 0.16 -0.6
3,674,071 + CA264_15735 0.16 -0.1
3,674,071 + CA264_15735 0.16 -1.5
3,674,071 + CA264_15735 0.16 -0.3
3,674,071 + CA264_15735 0.16 -0.1
3,674,071 + CA264_15735 0.16 -2.0
3,674,072 - CA264_15735 0.16 -0.4
3,674,156 - CA264_15735 0.19 -0.0
3,674,242 + CA264_15735 0.21 +0.5
3,674,245 + CA264_15735 0.21 +0.8
3,674,245 + CA264_15735 0.21 -0.2
3,674,286 + CA264_15735 0.22 +0.3
3,674,368 - CA264_15735 0.24 -0.5

Or see this region's nucleotide sequence