Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14550 and CA264_14555 are separated by 60 nucleotides CA264_14555 and CA264_14560 are separated by 59 nucleotides CA264_14560 and CA264_14565 are separated by 340 nucleotides
CA264_14550: CA264_14550 - cell surface protein SprA, at 3,414,435 to 3,421,562
_14550
CA264_14555: CA264_14555 - glycine cleavage system protein H, at 3,421,623 to 3,422,003
_14555
CA264_14560: CA264_14560 - VanZ family protein, at 3,422,063 to 3,422,395
_14560
CA264_14565: CA264_14565 - hypothetical protein, at 3,422,736 to 3,424,028
_14565
Position (kb)
3421
3422
3423 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3420.675 kb on - strand, within CA264_14550 at 3420.741 kb on + strand, within CA264_14550 at 3420.805 kb on + strand, within CA264_14550 at 3420.869 kb on - strand at 3420.873 kb on + strand at 3420.874 kb on - strand at 3420.874 kb on - strand at 3420.952 kb on - strand at 3420.985 kb on - strand at 3421.044 kb on + strand at 3421.048 kb on - strand at 3421.048 kb on - strand at 3421.048 kb on - strand at 3421.054 kb on + strand at 3421.124 kb on + strand at 3421.140 kb on + strand at 3421.142 kb on + strand at 3421.142 kb on + strand at 3421.143 kb on - strand at 3421.143 kb on - strand at 3421.210 kb on - strand at 3421.210 kb on - strand at 3421.249 kb on + strand at 3421.295 kb on - strand at 3421.434 kb on + strand at 3421.434 kb on + strand at 3421.434 kb on + strand at 3421.434 kb on + strand at 3421.435 kb on - strand at 3421.435 kb on - strand at 3421.438 kb on + strand at 3421.468 kb on - strand at 3421.468 kb on - strand at 3421.601 kb on + strand at 3421.602 kb on - strand at 3421.602 kb on - strand at 3421.613 kb on + strand at 3422.016 kb on + strand at 3422.041 kb on - strand at 3422.045 kb on - strand at 3422.207 kb on - strand, within CA264_14560 at 3422.251 kb on + strand, within CA264_14560 at 3422.331 kb on + strand, within CA264_14560 at 3422.332 kb on - strand, within CA264_14560 at 3422.374 kb on + strand at 3422.384 kb on + strand at 3422.385 kb on - strand at 3422.417 kb on + strand at 3422.420 kb on - strand at 3422.470 kb on - strand at 3422.480 kb on - strand at 3422.480 kb on - strand at 3422.570 kb on + strand at 3422.571 kb on - strand at 3422.606 kb on + strand at 3422.606 kb on + strand at 3422.607 kb on - strand at 3422.642 kb on + strand at 3422.643 kb on - strand at 3422.648 kb on - strand at 3422.648 kb on - strand at 3422.648 kb on - strand at 3422.649 kb on + strand at 3422.650 kb on - strand at 3422.650 kb on - strand at 3422.724 kb on + strand at 3422.730 kb on - strand at 3422.865 kb on + strand at 3422.866 kb on - strand, within CA264_14565 at 3422.867 kb on + strand, within CA264_14565 at 3422.867 kb on + strand, within CA264_14565 at 3422.868 kb on - strand, within CA264_14565 at 3422.898 kb on + strand, within CA264_14565 at 3422.899 kb on - strand, within CA264_14565 at 3422.949 kb on + strand, within CA264_14565 at 3422.986 kb on + strand, within CA264_14565 at 3422.986 kb on + strand, within CA264_14565 at 3423.001 kb on + strand, within CA264_14565
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,420,675 - CA264_14550 0.88 +3.4 3,420,741 + CA264_14550 0.88 +3.2 3,420,805 + CA264_14550 0.89 +3.7 3,420,869 - +2.5 3,420,873 + +3.2 3,420,874 - +4.2 3,420,874 - +3.4 3,420,952 - +3.1 3,420,985 - +3.2 3,421,044 + +3.8 3,421,048 - +3.0 3,421,048 - +2.7 3,421,048 - +3.8 3,421,054 + +3.3 3,421,124 + +3.2 3,421,140 + +4.0 3,421,142 + +3.0 3,421,142 + +3.1 3,421,143 - +3.2 3,421,143 - +3.3 3,421,210 - +3.1 3,421,210 - +3.3 3,421,249 + +2.1 3,421,295 - +3.3 3,421,434 + +3.3 3,421,434 + +3.1 3,421,434 + +3.2 3,421,434 + +2.9 3,421,435 - +2.8 3,421,435 - +4.7 3,421,438 + +2.3 3,421,468 - +3.5 3,421,468 - +2.6 3,421,601 + -1.1 3,421,602 - +1.5 3,421,602 - +1.7 3,421,613 + +0.3 3,422,016 + -1.0 3,422,041 - +0.4 3,422,045 - -0.9 3,422,207 - CA264_14560 0.43 +1.1 3,422,251 + CA264_14560 0.56 +3.0 3,422,331 + CA264_14560 0.80 +0.6 3,422,332 - CA264_14560 0.81 +0.2 3,422,374 + -0.1 3,422,384 + -0.6 3,422,385 - +0.8 3,422,417 + +0.3 3,422,420 - -0.2 3,422,470 - -0.4 3,422,480 - -0.1 3,422,480 - +0.1 3,422,570 + +0.4 3,422,571 - -0.2 3,422,606 + -0.7 3,422,606 + +0.6 3,422,607 - -0.4 3,422,642 + +0.2 3,422,643 - -0.0 3,422,648 - -0.1 3,422,648 - -1.0 3,422,648 - +0.6 3,422,649 + +0.4 3,422,650 - -0.5 3,422,650 - +0.3 3,422,724 + +0.6 3,422,730 - -1.3 3,422,865 + -0.2 3,422,866 - CA264_14565 0.10 -0.5 3,422,867 + CA264_14565 0.10 -0.0 3,422,867 + CA264_14565 0.10 +0.9 3,422,868 - CA264_14565 0.10 -0.3 3,422,898 + CA264_14565 0.13 -0.3 3,422,899 - CA264_14565 0.13 -0.6 3,422,949 + CA264_14565 0.16 +0.3 3,422,986 + CA264_14565 0.19 +2.2 3,422,986 + CA264_14565 0.19 -0.0 3,423,001 + CA264_14565 0.20 -0.1
Or see this region's nucleotide sequence