Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14275

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14270 and CA264_14275 are separated by 690 nucleotidesCA264_14275 and CA264_14280 are separated by 74 nucleotides CA264_14270: CA264_14270 - NADH-quinone oxidoreductase subunit N, at 3,347,693 to 3,349,078 _14270 CA264_14275: CA264_14275 - aspartate--tRNA ligase, at 3,349,769 to 3,351,529 _14275 CA264_14280: CA264_14280 - hypothetical protein, at 3,351,604 to 3,352,587 _14280 Position (kb) 3349 3350 3351 3352Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3349.086 kb on + strandat 3349.087 kb on - strandat 3349.089 kb on + strandat 3349.089 kb on + strandat 3349.168 kb on - strandat 3349.168 kb on - strandat 3349.218 kb on + strandat 3349.218 kb on + strandat 3349.264 kb on + strandat 3349.285 kb on + strandat 3349.285 kb on + strandat 3349.286 kb on - strandat 3349.286 kb on - strandat 3349.309 kb on + strandat 3349.333 kb on + strandat 3349.335 kb on + strandat 3349.336 kb on - strandat 3349.341 kb on - strandat 3349.341 kb on - strandat 3349.421 kb on + strandat 3349.421 kb on + strandat 3349.422 kb on - strandat 3349.431 kb on + strandat 3349.508 kb on + strandat 3349.613 kb on - strandat 3349.678 kb on + strandat 3349.679 kb on - strandat 3349.797 kb on - strandat 3351.539 kb on + strandat 3351.539 kb on + strandat 3351.539 kb on + strandat 3351.539 kb on + strandat 3351.539 kb on + strandat 3351.545 kb on - strandat 3351.546 kb on + strandat 3351.640 kb on + strandat 3351.641 kb on - strandat 3351.641 kb on - strandat 3351.647 kb on - strandat 3351.778 kb on + strand, within CA264_14280at 3351.778 kb on + strand, within CA264_14280at 3351.787 kb on + strand, within CA264_14280at 3351.794 kb on + strand, within CA264_14280at 3351.794 kb on + strand, within CA264_14280at 3351.795 kb on - strand, within CA264_14280at 3351.911 kb on - strand, within CA264_14280at 3351.930 kb on - strand, within CA264_14280at 3351.933 kb on + strand, within CA264_14280at 3351.933 kb on + strand, within CA264_14280at 3351.934 kb on - strand, within CA264_14280at 3351.935 kb on + strand, within CA264_14280at 3351.935 kb on + strand, within CA264_14280at 3351.968 kb on + strand, within CA264_14280at 3351.969 kb on - strand, within CA264_14280at 3351.971 kb on + strand, within CA264_14280at 3351.971 kb on + strand, within CA264_14280at 3351.971 kb on + strand, within CA264_14280at 3352.007 kb on - strand, within CA264_14280at 3352.321 kb on + strand, within CA264_14280at 3352.489 kb on + strandat 3352.490 kb on - strandat 3352.492 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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3,349,086 + +0.6
3,349,087 - +4.8
3,349,089 + -0.2
3,349,089 + -0.1
3,349,168 - +2.6
3,349,168 - +1.7
3,349,218 + -0.2
3,349,218 + +0.4
3,349,264 + +1.4
3,349,285 + -0.5
3,349,285 + -0.2
3,349,286 - +2.9
3,349,286 - +3.2
3,349,309 + +1.0
3,349,333 + +1.4
3,349,335 + -0.4
3,349,336 - +3.2
3,349,341 - +2.1
3,349,341 - +3.0
3,349,421 + +0.7
3,349,421 + +0.2
3,349,422 - +2.9
3,349,431 + +0.5
3,349,508 + +0.2
3,349,613 - +1.6
3,349,678 + -1.9
3,349,679 - +3.3
3,349,797 - -2.3
3,351,539 + -0.4
3,351,539 + -0.1
3,351,539 + -1.3
3,351,539 + +0.1
3,351,539 + +1.8
3,351,545 - -0.1
3,351,546 + +0.3
3,351,640 + +0.1
3,351,641 - -0.3
3,351,641 - -0.6
3,351,647 - -1.6
3,351,778 + CA264_14280 0.18 +0.9
3,351,778 + CA264_14280 0.18 -0.6
3,351,787 + CA264_14280 0.19 -1.4
3,351,794 + CA264_14280 0.19 -0.8
3,351,794 + CA264_14280 0.19 -0.4
3,351,795 - CA264_14280 0.19 -1.8
3,351,911 - CA264_14280 0.31 -0.1
3,351,930 - CA264_14280 0.33 +0.4
3,351,933 + CA264_14280 0.33 -0.9
3,351,933 + CA264_14280 0.33 -0.1
3,351,934 - CA264_14280 0.34 -1.1
3,351,935 + CA264_14280 0.34 -2.2
3,351,935 + CA264_14280 0.34 +0.6
3,351,968 + CA264_14280 0.37 +1.2
3,351,969 - CA264_14280 0.37 -2.7
3,351,971 + CA264_14280 0.37 +2.9
3,351,971 + CA264_14280 0.37 -0.5
3,351,971 + CA264_14280 0.37 -0.1
3,352,007 - CA264_14280 0.41 -1.6
3,352,321 + CA264_14280 0.73 -0.8
3,352,489 + +0.4
3,352,490 - -0.6
3,352,492 - -0.2

Or see this region's nucleotide sequence