Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14260

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14250 and CA264_14255 are separated by 372 nucleotidesCA264_14255 and CA264_14260 are separated by 40 nucleotidesCA264_14260 and CA264_14265 are separated by 12 nucleotides CA264_14250: CA264_14250 - hypothetical protein, at 3,342,556 to 3,343,485 _14250 CA264_14255: CA264_14255 - NADH-quinone oxidoreductase subunit K, at 3,343,858 to 3,344,187 _14255 CA264_14260: CA264_14260 - NADH-quinone oxidoreductase subunit L, at 3,344,228 to 3,346,189 _14260 CA264_14265: CA264_14265 - NADH-quinone oxidoreductase subunit M, at 3,346,202 to 3,347,653 _14265 Position (kb) 3344 3345 3346 3347Strain fitness (log2 ratio) -1 0 1 2 3 4at 3343.261 kb on - strand, within CA264_14250at 3343.261 kb on - strand, within CA264_14250at 3343.568 kb on - strandat 3343.582 kb on + strandat 3343.582 kb on + strandat 3343.587 kb on + strandat 3343.587 kb on + strandat 3343.587 kb on + strandat 3343.588 kb on - strandat 3343.588 kb on - strandat 3343.588 kb on - strandat 3343.588 kb on - strandat 3343.590 kb on - strandat 3343.590 kb on - strandat 3343.590 kb on - strandat 3343.609 kb on + strandat 3343.616 kb on + strandat 3343.626 kb on - strandat 3343.629 kb on + strandat 3343.630 kb on - strandat 3343.691 kb on + strandat 3343.692 kb on - strandat 3343.769 kb on + strandat 3343.769 kb on + strandat 3343.769 kb on + strandat 3343.770 kb on - strandat 3343.824 kb on + strandat 3343.836 kb on - strandat 3343.869 kb on - strandat 3343.869 kb on - strandat 3344.173 kb on + strandat 3344.209 kb on - strandat 3344.222 kb on - strandat 3344.222 kb on - strandat 3344.242 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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3,343,261 - CA264_14250 0.76 +1.9
3,343,261 - CA264_14250 0.76 +1.0
3,343,568 - +1.2
3,343,582 + -0.0
3,343,582 + +0.2
3,343,587 + +0.9
3,343,587 + +0.3
3,343,587 + +0.1
3,343,588 - +1.5
3,343,588 - +1.4
3,343,588 - +1.4
3,343,588 - +1.9
3,343,590 - +2.2
3,343,590 - +2.2
3,343,590 - +2.6
3,343,609 + +2.2
3,343,616 + -0.2
3,343,626 - +3.6
3,343,629 + +0.5
3,343,630 - +2.4
3,343,691 + +0.6
3,343,692 - +3.1
3,343,769 + -0.9
3,343,769 + +0.3
3,343,769 + -0.2
3,343,770 - +2.0
3,343,824 + +0.4
3,343,836 - +1.4
3,343,869 - +2.9
3,343,869 - +2.5
3,344,173 + +1.3
3,344,209 - +4.3
3,344,222 - +4.1
3,344,222 - +3.9
3,344,242 - +4.2

Or see this region's nucleotide sequence