Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11745

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11740 and CA264_11745 are separated by 4 nucleotidesCA264_11745 and CA264_11750 overlap by 8 nucleotides CA264_11740: CA264_11740 - hypothetical protein, at 2,733,679 to 2,735,715 _11740 CA264_11745: CA264_11745 - hypothetical protein, at 2,735,720 to 2,736,721 _11745 CA264_11750: CA264_11750 - hypothetical protein, at 2,736,714 to 2,739,500 _11750 Position (kb) 2735 2736 2737Strain fitness (log2 ratio) -2 -1 0 1 2at 2734.795 kb on + strand, within CA264_11740at 2734.796 kb on - strand, within CA264_11740at 2734.807 kb on - strand, within CA264_11740at 2734.851 kb on + strand, within CA264_11740at 2734.852 kb on - strand, within CA264_11740at 2734.852 kb on - strand, within CA264_11740at 2734.853 kb on + strand, within CA264_11740at 2734.854 kb on - strand, within CA264_11740at 2734.871 kb on + strand, within CA264_11740at 2734.871 kb on + strand, within CA264_11740at 2734.879 kb on - strand, within CA264_11740at 2734.883 kb on - strand, within CA264_11740at 2734.976 kb on - strand, within CA264_11740at 2734.999 kb on + strand, within CA264_11740at 2735.000 kb on - strand, within CA264_11740at 2735.000 kb on - strand, within CA264_11740at 2735.053 kb on - strand, within CA264_11740at 2735.070 kb on + strand, within CA264_11740at 2735.070 kb on + strand, within CA264_11740at 2735.076 kb on - strand, within CA264_11740at 2735.083 kb on + strand, within CA264_11740at 2735.084 kb on - strand, within CA264_11740at 2735.184 kb on - strand, within CA264_11740at 2735.228 kb on + strand, within CA264_11740at 2735.258 kb on - strand, within CA264_11740at 2735.262 kb on + strand, within CA264_11740at 2735.262 kb on + strand, within CA264_11740at 2735.263 kb on - strand, within CA264_11740at 2735.263 kb on - strand, within CA264_11740at 2735.335 kb on + strand, within CA264_11740at 2735.335 kb on + strand, within CA264_11740at 2735.335 kb on + strand, within CA264_11740at 2735.336 kb on - strand, within CA264_11740at 2735.341 kb on + strand, within CA264_11740at 2735.458 kb on + strand, within CA264_11740at 2735.463 kb on + strand, within CA264_11740at 2735.490 kb on + strand, within CA264_11740at 2735.490 kb on + strand, within CA264_11740at 2735.491 kb on - strand, within CA264_11740at 2735.491 kb on - strand, within CA264_11740at 2735.491 kb on - strand, within CA264_11740at 2735.506 kb on + strand, within CA264_11740at 2735.506 kb on + strand, within CA264_11740at 2735.529 kb on - strandat 2735.529 kb on - strandat 2735.529 kb on - strandat 2735.542 kb on + strandat 2735.543 kb on - strandat 2735.564 kb on + strandat 2735.564 kb on + strandat 2735.565 kb on - strandat 2735.565 kb on - strandat 2735.572 kb on + strandat 2735.573 kb on - strandat 2735.573 kb on - strandat 2735.609 kb on + strandat 2735.610 kb on - strandat 2735.610 kb on - strandat 2735.610 kb on - strandat 2735.619 kb on + strandat 2735.632 kb on - strandat 2735.683 kb on + strandat 2735.729 kb on - strandat 2735.734 kb on + strandat 2735.782 kb on + strandat 2735.783 kb on - strandat 2735.784 kb on + strandat 2735.846 kb on + strand, within CA264_11745at 2735.847 kb on - strand, within CA264_11745at 2735.853 kb on + strand, within CA264_11745at 2735.889 kb on + strand, within CA264_11745at 2735.889 kb on + strand, within CA264_11745at 2735.911 kb on + strand, within CA264_11745at 2735.911 kb on + strand, within CA264_11745at 2735.911 kb on + strand, within CA264_11745at 2735.912 kb on - strand, within CA264_11745at 2735.912 kb on - strand, within CA264_11745at 2735.919 kb on + strand, within CA264_11745at 2735.938 kb on + strand, within CA264_11745at 2735.969 kb on + strand, within CA264_11745at 2736.064 kb on + strand, within CA264_11745at 2736.422 kb on + strand, within CA264_11745at 2736.506 kb on + strand, within CA264_11745at 2736.507 kb on - strand, within CA264_11745at 2736.574 kb on - strand, within CA264_11745at 2736.729 kb on + strandat 2736.730 kb on - strandat 2736.745 kb on + strandat 2736.755 kb on + strandat 2736.755 kb on + strandat 2736.756 kb on - strandat 2736.775 kb on - strandat 2736.881 kb on - strandat 2736.888 kb on + strandat 2736.944 kb on + strandat 2737.032 kb on + strand, within CA264_11750at 2737.064 kb on + strand, within CA264_11750at 2737.137 kb on - strand, within CA264_11750at 2737.137 kb on - strand, within CA264_11750at 2737.148 kb on + strand, within CA264_11750at 2737.161 kb on + strand, within CA264_11750at 2737.161 kb on + strand, within CA264_11750at 2737.178 kb on + strand, within CA264_11750at 2737.199 kb on - strand, within CA264_11750at 2737.206 kb on + strand, within CA264_11750at 2737.240 kb on + strand, within CA264_11750at 2737.567 kb on + strand, within CA264_11750at 2737.583 kb on + strand, within CA264_11750at 2737.583 kb on + strand, within CA264_11750at 2737.592 kb on - strand, within CA264_11750at 2737.592 kb on - strand, within CA264_11750at 2737.598 kb on + strand, within CA264_11750at 2737.599 kb on - strand, within CA264_11750at 2737.687 kb on + strand, within CA264_11750at 2737.707 kb on - strand, within CA264_11750at 2737.717 kb on - strand, within CA264_11750

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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2,734,795 + CA264_11740 0.55 +0.3
2,734,796 - CA264_11740 0.55 -0.7
2,734,807 - CA264_11740 0.55 -0.9
2,734,851 + CA264_11740 0.58 +0.1
2,734,852 - CA264_11740 0.58 -0.1
2,734,852 - CA264_11740 0.58 -0.8
2,734,853 + CA264_11740 0.58 +0.5
2,734,854 - CA264_11740 0.58 -0.8
2,734,871 + CA264_11740 0.59 +0.1
2,734,871 + CA264_11740 0.59 +0.4
2,734,879 - CA264_11740 0.59 -0.5
2,734,883 - CA264_11740 0.59 -1.9
2,734,976 - CA264_11740 0.64 +0.1
2,734,999 + CA264_11740 0.65 -0.0
2,735,000 - CA264_11740 0.65 -1.0
2,735,000 - CA264_11740 0.65 +1.1
2,735,053 - CA264_11740 0.67 -0.2
2,735,070 + CA264_11740 0.68 +0.1
2,735,070 + CA264_11740 0.68 -0.9
2,735,076 - CA264_11740 0.69 -1.3
2,735,083 + CA264_11740 0.69 -0.1
2,735,084 - CA264_11740 0.69 -0.2
2,735,184 - CA264_11740 0.74 -0.2
2,735,228 + CA264_11740 0.76 -0.0
2,735,258 - CA264_11740 0.78 -0.6
2,735,262 + CA264_11740 0.78 +0.7
2,735,262 + CA264_11740 0.78 +0.0
2,735,263 - CA264_11740 0.78 +0.3
2,735,263 - CA264_11740 0.78 -1.0
2,735,335 + CA264_11740 0.81 +0.4
2,735,335 + CA264_11740 0.81 +0.4
2,735,335 + CA264_11740 0.81 -0.8
2,735,336 - CA264_11740 0.81 -1.9
2,735,341 + CA264_11740 0.82 +0.4
2,735,458 + CA264_11740 0.87 +1.0
2,735,463 + CA264_11740 0.88 +0.4
2,735,490 + CA264_11740 0.89 +0.4
2,735,490 + CA264_11740 0.89 -0.9
2,735,491 - CA264_11740 0.89 +0.8
2,735,491 - CA264_11740 0.89 -1.4
2,735,491 - CA264_11740 0.89 +0.4
2,735,506 + CA264_11740 0.90 +0.9
2,735,506 + CA264_11740 0.90 +1.2
2,735,529 - -0.7
2,735,529 - +1.8
2,735,529 - -0.6
2,735,542 + -0.2
2,735,543 - -0.9
2,735,564 + +0.6
2,735,564 + -0.1
2,735,565 - +0.4
2,735,565 - -0.4
2,735,572 + +0.5
2,735,573 - -0.4
2,735,573 - +0.1
2,735,609 + +0.7
2,735,610 - -0.6
2,735,610 - -0.6
2,735,610 - +1.8
2,735,619 + +0.5
2,735,632 - +0.8
2,735,683 + +0.0
2,735,729 - +0.5
2,735,734 + +0.3
2,735,782 + +0.4
2,735,783 - +0.4
2,735,784 + +0.8
2,735,846 + CA264_11745 0.13 +0.2
2,735,847 - CA264_11745 0.13 -0.6
2,735,853 + CA264_11745 0.13 -0.0
2,735,889 + CA264_11745 0.17 +0.4
2,735,889 + CA264_11745 0.17 +0.8
2,735,911 + CA264_11745 0.19 -0.0
2,735,911 + CA264_11745 0.19 +0.1
2,735,911 + CA264_11745 0.19 +0.3
2,735,912 - CA264_11745 0.19 +1.0
2,735,912 - CA264_11745 0.19 -0.3
2,735,919 + CA264_11745 0.20 +0.4
2,735,938 + CA264_11745 0.22 +1.8
2,735,969 + CA264_11745 0.25 +0.6
2,736,064 + CA264_11745 0.34 -0.2
2,736,422 + CA264_11745 0.70 +0.3
2,736,506 + CA264_11745 0.78 -0.4
2,736,507 - CA264_11745 0.79 -0.8
2,736,574 - CA264_11745 0.85 +2.3
2,736,729 + +0.6
2,736,730 - +0.5
2,736,745 + +1.5
2,736,755 + -0.7
2,736,755 + +0.4
2,736,756 - +0.1
2,736,775 - -1.1
2,736,881 - -2.7
2,736,888 + -0.3
2,736,944 + +0.6
2,737,032 + CA264_11750 0.11 +1.6
2,737,064 + CA264_11750 0.13 -0.0
2,737,137 - CA264_11750 0.15 +0.8
2,737,137 - CA264_11750 0.15 -1.3
2,737,148 + CA264_11750 0.16 +1.4
2,737,161 + CA264_11750 0.16 +0.1
2,737,161 + CA264_11750 0.16 -0.3
2,737,178 + CA264_11750 0.17 +0.4
2,737,199 - CA264_11750 0.17 -0.5
2,737,206 + CA264_11750 0.18 +0.1
2,737,240 + CA264_11750 0.19 +1.2
2,737,567 + CA264_11750 0.31 -2.4
2,737,583 + CA264_11750 0.31 +0.1
2,737,583 + CA264_11750 0.31 -1.1
2,737,592 - CA264_11750 0.32 -0.3
2,737,592 - CA264_11750 0.32 -0.9
2,737,598 + CA264_11750 0.32 -0.2
2,737,599 - CA264_11750 0.32 +0.0
2,737,687 + CA264_11750 0.35 -1.4
2,737,707 - CA264_11750 0.36 -0.1
2,737,717 - CA264_11750 0.36 +0.1

Or see this region's nucleotide sequence