Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11420

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11415 and CA264_11420 overlap by 4 nucleotidesCA264_11420 and CA264_11425 are separated by 5 nucleotides CA264_11415: CA264_11415 - carbohydrate kinase, at 2,644,748 to 2,646,208 _11415 CA264_11420: CA264_11420 - sugar kinase, at 2,646,205 to 2,647,665 _11420 CA264_11425: CA264_11425 - hydroxyacid dehydrogenase, at 2,647,671 to 2,648,672 _11425 Position (kb) 2646 2647 2648Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2645.228 kb on + strand, within CA264_11415at 2645.237 kb on - strand, within CA264_11415at 2645.298 kb on - strand, within CA264_11415at 2645.365 kb on - strand, within CA264_11415at 2645.384 kb on + strand, within CA264_11415at 2645.385 kb on - strand, within CA264_11415at 2645.557 kb on + strand, within CA264_11415at 2645.557 kb on + strand, within CA264_11415at 2645.558 kb on - strand, within CA264_11415at 2645.558 kb on - strand, within CA264_11415at 2645.661 kb on + strand, within CA264_11415at 2645.693 kb on + strand, within CA264_11415at 2645.695 kb on + strand, within CA264_11415at 2645.695 kb on + strand, within CA264_11415at 2645.695 kb on + strand, within CA264_11415at 2645.711 kb on + strand, within CA264_11415at 2645.712 kb on - strand, within CA264_11415at 2645.712 kb on - strand, within CA264_11415at 2645.712 kb on - strand, within CA264_11415at 2645.728 kb on - strand, within CA264_11415at 2645.821 kb on + strand, within CA264_11415at 2645.830 kb on + strand, within CA264_11415at 2645.858 kb on + strand, within CA264_11415at 2645.904 kb on + strand, within CA264_11415at 2645.905 kb on - strand, within CA264_11415at 2645.966 kb on - strand, within CA264_11415at 2645.971 kb on + strand, within CA264_11415at 2645.971 kb on + strand, within CA264_11415at 2645.972 kb on - strand, within CA264_11415at 2645.987 kb on + strand, within CA264_11415at 2645.997 kb on - strand, within CA264_11415at 2645.997 kb on - strand, within CA264_11415at 2646.182 kb on + strandat 2646.182 kb on + strandat 2646.182 kb on + strandat 2646.182 kb on + strandat 2646.182 kb on + strandat 2646.183 kb on - strandat 2646.183 kb on - strandat 2646.196 kb on - strandat 2646.209 kb on - strandat 2646.255 kb on + strandat 2646.300 kb on - strandat 2646.304 kb on + strandat 2646.305 kb on - strandat 2646.321 kb on + strandat 2646.321 kb on + strandat 2646.322 kb on - strandat 2646.322 kb on - strandat 2646.334 kb on + strandat 2646.370 kb on + strand, within CA264_11420at 2646.478 kb on + strand, within CA264_11420at 2646.478 kb on + strand, within CA264_11420at 2646.478 kb on + strand, within CA264_11420at 2646.478 kb on + strand, within CA264_11420at 2646.482 kb on + strand, within CA264_11420at 2646.487 kb on + strand, within CA264_11420at 2646.488 kb on - strand, within CA264_11420at 2646.544 kb on + strand, within CA264_11420at 2646.544 kb on + strand, within CA264_11420at 2646.544 kb on + strand, within CA264_11420at 2646.545 kb on - strand, within CA264_11420at 2646.545 kb on - strand, within CA264_11420at 2646.545 kb on - strand, within CA264_11420at 2646.546 kb on + strand, within CA264_11420at 2646.582 kb on + strand, within CA264_11420at 2646.720 kb on - strand, within CA264_11420at 2646.720 kb on - strand, within CA264_11420at 2646.790 kb on + strand, within CA264_11420at 2646.790 kb on + strand, within CA264_11420at 2646.793 kb on + strand, within CA264_11420at 2646.793 kb on + strand, within CA264_11420at 2646.811 kb on + strand, within CA264_11420at 2646.811 kb on + strand, within CA264_11420at 2646.811 kb on + strand, within CA264_11420at 2646.812 kb on - strand, within CA264_11420at 2646.854 kb on + strand, within CA264_11420at 2646.854 kb on + strand, within CA264_11420at 2646.885 kb on + strand, within CA264_11420at 2646.886 kb on - strand, within CA264_11420at 2646.886 kb on - strand, within CA264_11420at 2646.886 kb on - strand, within CA264_11420at 2646.964 kb on + strand, within CA264_11420at 2647.027 kb on + strand, within CA264_11420at 2647.028 kb on - strand, within CA264_11420at 2647.029 kb on + strand, within CA264_11420at 2647.121 kb on + strand, within CA264_11420at 2647.121 kb on + strand, within CA264_11420at 2647.122 kb on - strand, within CA264_11420at 2647.122 kb on - strand, within CA264_11420at 2647.171 kb on + strand, within CA264_11420at 2647.195 kb on + strand, within CA264_11420at 2647.196 kb on - strand, within CA264_11420at 2647.201 kb on + strand, within CA264_11420at 2647.201 kb on + strand, within CA264_11420at 2647.202 kb on - strand, within CA264_11420at 2647.219 kb on - strand, within CA264_11420at 2647.223 kb on + strand, within CA264_11420at 2647.223 kb on + strand, within CA264_11420at 2647.224 kb on - strand, within CA264_11420at 2647.224 kb on - strand, within CA264_11420at 2647.377 kb on + strand, within CA264_11420at 2647.377 kb on + strand, within CA264_11420at 2647.378 kb on - strand, within CA264_11420at 2647.509 kb on + strand, within CA264_11420at 2647.539 kb on + strandat 2647.539 kb on + strandat 2647.540 kb on - strandat 2647.553 kb on + strandat 2647.558 kb on + strandat 2647.558 kb on + strandat 2647.559 kb on - strandat 2647.582 kb on + strandat 2647.646 kb on + strandat 2647.672 kb on + strandat 2647.704 kb on + strandat 2647.705 kb on - strandat 2647.846 kb on + strand, within CA264_11425at 2647.907 kb on + strand, within CA264_11425at 2647.998 kb on - strand, within CA264_11425at 2648.016 kb on - strand, within CA264_11425at 2648.069 kb on + strand, within CA264_11425at 2648.070 kb on - strand, within CA264_11425at 2648.070 kb on - strand, within CA264_11425at 2648.070 kb on - strand, within CA264_11425at 2648.131 kb on + strand, within CA264_11425at 2648.320 kb on - strand, within CA264_11425at 2648.366 kb on + strand, within CA264_11425at 2648.381 kb on + strand, within CA264_11425at 2648.392 kb on - strand, within CA264_11425at 2648.392 kb on - strand, within CA264_11425at 2648.393 kb on + strand, within CA264_11425at 2648.394 kb on - strand, within CA264_11425at 2648.481 kb on + strand, within CA264_11425at 2648.482 kb on - strand, within CA264_11425at 2648.482 kb on - strand, within CA264_11425at 2648.567 kb on - strand, within CA264_11425at 2648.567 kb on - strand, within CA264_11425at 2648.594 kb on + strandat 2648.594 kb on + strandat 2648.597 kb on - strandat 2648.597 kb on - strandat 2648.597 kb on - strandat 2648.599 kb on - strandat 2648.632 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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2,645,228 + CA264_11415 0.33 -0.8
2,645,237 - CA264_11415 0.33 -0.8
2,645,298 - CA264_11415 0.38 -0.2
2,645,365 - CA264_11415 0.42 -1.1
2,645,384 + CA264_11415 0.44 +0.8
2,645,385 - CA264_11415 0.44 -1.1
2,645,557 + CA264_11415 0.55 -0.1
2,645,557 + CA264_11415 0.55 -0.5
2,645,558 - CA264_11415 0.55 -1.0
2,645,558 - CA264_11415 0.55 -1.4
2,645,661 + CA264_11415 0.62 -0.1
2,645,693 + CA264_11415 0.65 -0.1
2,645,695 + CA264_11415 0.65 +0.0
2,645,695 + CA264_11415 0.65 +0.3
2,645,695 + CA264_11415 0.65 +0.1
2,645,711 + CA264_11415 0.66 +0.2
2,645,712 - CA264_11415 0.66 -1.5
2,645,712 - CA264_11415 0.66 -0.9
2,645,712 - CA264_11415 0.66 +0.1
2,645,728 - CA264_11415 0.67 -0.9
2,645,821 + CA264_11415 0.73 -1.3
2,645,830 + CA264_11415 0.74 +0.6
2,645,858 + CA264_11415 0.76 -0.3
2,645,904 + CA264_11415 0.79 +0.1
2,645,905 - CA264_11415 0.79 -0.1
2,645,966 - CA264_11415 0.83 -0.5
2,645,971 + CA264_11415 0.84 -0.2
2,645,971 + CA264_11415 0.84 +1.2
2,645,972 - CA264_11415 0.84 -1.9
2,645,987 + CA264_11415 0.85 +0.2
2,645,997 - CA264_11415 0.85 -1.0
2,645,997 - CA264_11415 0.85 -0.9
2,646,182 + -1.5
2,646,182 + +1.5
2,646,182 + -0.8
2,646,182 + +1.0
2,646,182 + -0.4
2,646,183 - -1.0
2,646,183 - -1.3
2,646,196 - -1.2
2,646,209 - -1.5
2,646,255 + -0.3
2,646,300 - +0.3
2,646,304 + -1.2
2,646,305 - -0.4
2,646,321 + +0.8
2,646,321 + +0.0
2,646,322 - -0.4
2,646,322 - -1.2
2,646,334 + -0.6
2,646,370 + CA264_11420 0.11 +0.0
2,646,478 + CA264_11420 0.19 -1.5
2,646,478 + CA264_11420 0.19 -0.4
2,646,478 + CA264_11420 0.19 +0.8
2,646,478 + CA264_11420 0.19 +0.2
2,646,482 + CA264_11420 0.19 +1.4
2,646,487 + CA264_11420 0.19 -0.1
2,646,488 - CA264_11420 0.19 -0.0
2,646,544 + CA264_11420 0.23 -0.2
2,646,544 + CA264_11420 0.23 +2.9
2,646,544 + CA264_11420 0.23 -0.6
2,646,545 - CA264_11420 0.23 -0.8
2,646,545 - CA264_11420 0.23 -0.7
2,646,545 - CA264_11420 0.23 -1.2
2,646,546 + CA264_11420 0.23 +0.9
2,646,582 + CA264_11420 0.26 +1.2
2,646,720 - CA264_11420 0.35 -0.7
2,646,720 - CA264_11420 0.35 -0.2
2,646,790 + CA264_11420 0.40 -0.6
2,646,790 + CA264_11420 0.40 -0.5
2,646,793 + CA264_11420 0.40 -0.4
2,646,793 + CA264_11420 0.40 +0.5
2,646,811 + CA264_11420 0.41 -0.4
2,646,811 + CA264_11420 0.41 -0.1
2,646,811 + CA264_11420 0.41 -0.2
2,646,812 - CA264_11420 0.42 +0.5
2,646,854 + CA264_11420 0.44 +0.9
2,646,854 + CA264_11420 0.44 -0.1
2,646,885 + CA264_11420 0.47 +0.6
2,646,886 - CA264_11420 0.47 -0.6
2,646,886 - CA264_11420 0.47 -3.0
2,646,886 - CA264_11420 0.47 -0.6
2,646,964 + CA264_11420 0.52 +0.3
2,647,027 + CA264_11420 0.56 -0.3
2,647,028 - CA264_11420 0.56 -0.8
2,647,029 + CA264_11420 0.56 -1.1
2,647,121 + CA264_11420 0.63 -0.0
2,647,121 + CA264_11420 0.63 +0.2
2,647,122 - CA264_11420 0.63 +0.8
2,647,122 - CA264_11420 0.63 -0.4
2,647,171 + CA264_11420 0.66 +0.8
2,647,195 + CA264_11420 0.68 -0.3
2,647,196 - CA264_11420 0.68 -1.8
2,647,201 + CA264_11420 0.68 -0.2
2,647,201 + CA264_11420 0.68 -0.0
2,647,202 - CA264_11420 0.68 -0.4
2,647,219 - CA264_11420 0.69 -0.9
2,647,223 + CA264_11420 0.70 -1.0
2,647,223 + CA264_11420 0.70 -1.0
2,647,224 - CA264_11420 0.70 -1.2
2,647,224 - CA264_11420 0.70 -0.5
2,647,377 + CA264_11420 0.80 -0.1
2,647,377 + CA264_11420 0.80 -0.8
2,647,378 - CA264_11420 0.80 -0.2
2,647,509 + CA264_11420 0.89 -0.4
2,647,539 + +0.5
2,647,539 + +0.9
2,647,540 - -1.2
2,647,553 + +0.5
2,647,558 + -0.7
2,647,558 + -0.3
2,647,559 - +1.3
2,647,582 + +0.0
2,647,646 + +0.1
2,647,672 + -0.1
2,647,704 + -0.2
2,647,705 - -0.1
2,647,846 + CA264_11425 0.17 +0.0
2,647,907 + CA264_11425 0.24 -0.9
2,647,998 - CA264_11425 0.33 -0.6
2,648,016 - CA264_11425 0.34 -2.1
2,648,069 + CA264_11425 0.40 -1.0
2,648,070 - CA264_11425 0.40 -0.7
2,648,070 - CA264_11425 0.40 -0.8
2,648,070 - CA264_11425 0.40 +0.4
2,648,131 + CA264_11425 0.46 -0.4
2,648,320 - CA264_11425 0.65 -1.2
2,648,366 + CA264_11425 0.69 -0.7
2,648,381 + CA264_11425 0.71 -0.5
2,648,392 - CA264_11425 0.72 -0.2
2,648,392 - CA264_11425 0.72 -0.6
2,648,393 + CA264_11425 0.72 -1.8
2,648,394 - CA264_11425 0.72 -1.2
2,648,481 + CA264_11425 0.81 -0.3
2,648,482 - CA264_11425 0.81 -0.9
2,648,482 - CA264_11425 0.81 -1.5
2,648,567 - CA264_11425 0.89 +0.1
2,648,567 - CA264_11425 0.89 -0.8
2,648,594 + +0.7
2,648,594 + +0.0
2,648,597 - -0.5
2,648,597 - -1.2
2,648,597 - -1.2
2,648,599 - -0.9
2,648,632 - +0.7

Or see this region's nucleotide sequence