Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06910 and CA264_06915 are separated by 23 nucleotides CA264_06915 and CA264_06920 are separated by 145 nucleotides CA264_06920 and CA264_06925 are separated by 130 nucleotides CA264_06925 and CA264_06930 are separated by 23 nucleotides
CA264_06910: CA264_06910 - hypothetical protein, at 1,597,382 to 1,598,503
_06910
CA264_06915: CA264_06915 - DNA-binding response regulator, at 1,598,527 to 1,599,216
_06915
CA264_06920: CA264_06920 - ketol-acid reductoisomerase, at 1,599,362 to 1,600,408
_06920
CA264_06925: CA264_06925 - acetolactate synthase small subunit, at 1,600,539 to 1,601,147
_06925
CA264_06930: CA264_06930 - acetolactate synthase, large subunit, biosynthetic type, at 1,601,171 to 1,602,904
_06930
Position (kb)
1599
1600
1601 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1598.371 kb on - strand, within CA264_06910 at 1598.374 kb on + strand, within CA264_06910 at 1598.391 kb on + strand at 1598.391 kb on + strand at 1598.391 kb on + strand at 1598.392 kb on - strand at 1598.392 kb on - strand at 1598.397 kb on + strand at 1598.434 kb on + strand at 1598.471 kb on - strand at 1598.474 kb on + strand at 1598.474 kb on + strand at 1598.475 kb on - strand at 1598.475 kb on - strand at 1598.502 kb on - strand at 1598.508 kb on + strand at 1598.508 kb on + strand at 1598.509 kb on - strand at 1598.547 kb on - strand at 1598.585 kb on - strand at 1598.610 kb on - strand, within CA264_06915 at 1598.705 kb on + strand, within CA264_06915 at 1598.705 kb on + strand, within CA264_06915 at 1598.712 kb on + strand, within CA264_06915 at 1598.745 kb on + strand, within CA264_06915 at 1598.776 kb on + strand, within CA264_06915 at 1598.776 kb on + strand, within CA264_06915 at 1598.777 kb on - strand, within CA264_06915 at 1598.777 kb on - strand, within CA264_06915 at 1598.777 kb on - strand, within CA264_06915 at 1598.782 kb on + strand, within CA264_06915 at 1598.783 kb on - strand, within CA264_06915 at 1598.864 kb on - strand, within CA264_06915 at 1598.864 kb on - strand, within CA264_06915 at 1598.864 kb on - strand, within CA264_06915 at 1598.866 kb on + strand, within CA264_06915 at 1598.874 kb on + strand, within CA264_06915 at 1598.930 kb on + strand, within CA264_06915 at 1598.949 kb on + strand, within CA264_06915 at 1598.954 kb on - strand, within CA264_06915 at 1598.968 kb on + strand, within CA264_06915 at 1598.989 kb on + strand, within CA264_06915 at 1598.989 kb on + strand, within CA264_06915 at 1598.989 kb on + strand, within CA264_06915 at 1598.990 kb on - strand, within CA264_06915 at 1599.013 kb on - strand, within CA264_06915 at 1599.059 kb on + strand, within CA264_06915 at 1599.059 kb on + strand, within CA264_06915 at 1599.094 kb on + strand, within CA264_06915 at 1599.098 kb on + strand, within CA264_06915 at 1599.099 kb on - strand, within CA264_06915 at 1599.116 kb on + strand, within CA264_06915 at 1599.141 kb on + strand, within CA264_06915 at 1599.141 kb on + strand, within CA264_06915 at 1599.142 kb on - strand, within CA264_06915 at 1599.142 kb on - strand, within CA264_06915 at 1599.181 kb on + strand at 1599.182 kb on - strand at 1599.228 kb on + strand at 1599.229 kb on - strand at 1599.251 kb on + strand at 1599.349 kb on - strand at 1599.368 kb on - strand at 1599.368 kb on - strand at 1599.394 kb on + strand at 1599.522 kb on + strand, within CA264_06920 at 1599.726 kb on + strand, within CA264_06920 at 1599.727 kb on - strand, within CA264_06920 at 1599.727 kb on - strand, within CA264_06920 at 1599.737 kb on + strand, within CA264_06920 at 1599.738 kb on - strand, within CA264_06920 at 1599.893 kb on + strand, within CA264_06920 at 1599.894 kb on - strand, within CA264_06920 at 1599.894 kb on - strand, within CA264_06920 at 1600.019 kb on - strand, within CA264_06920 at 1600.047 kb on + strand, within CA264_06920 at 1600.097 kb on + strand, within CA264_06920 at 1600.119 kb on - strand, within CA264_06920 at 1600.157 kb on + strand, within CA264_06920 at 1600.181 kb on + strand, within CA264_06920 at 1600.198 kb on + strand, within CA264_06920 at 1600.199 kb on - strand, within CA264_06920 at 1600.238 kb on + strand, within CA264_06920 at 1600.238 kb on + strand, within CA264_06920 at 1600.382 kb on + strand at 1600.423 kb on + strand at 1600.430 kb on - strand at 1600.430 kb on - strand at 1600.492 kb on + strand at 1600.493 kb on - strand at 1600.574 kb on - strand at 1600.762 kb on + strand, within CA264_06925 at 1600.762 kb on + strand, within CA264_06925 at 1600.763 kb on - strand, within CA264_06925 at 1600.895 kb on + strand, within CA264_06925 at 1600.900 kb on + strand, within CA264_06925 at 1600.903 kb on - strand, within CA264_06925 at 1600.929 kb on + strand, within CA264_06925 at 1601.099 kb on - strand at 1601.147 kb on + strand at 1601.147 kb on + strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.152 kb on - strand at 1601.152 kb on - strand at 1601.161 kb on + strand at 1601.172 kb on + strand at 1601.192 kb on + strand at 1601.193 kb on - strand at 1601.193 kb on - strand at 1601.259 kb on + strand at 1601.259 kb on + strand at 1601.301 kb on - strand at 1601.357 kb on + strand, within CA264_06930 at 1601.357 kb on + strand, within CA264_06930 at 1601.358 kb on - strand, within CA264_06930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,598,371 - CA264_06910 0.88 -0.3 1,598,374 + CA264_06910 0.88 +0.2 1,598,391 + -1.0 1,598,391 + -0.1 1,598,391 + +0.7 1,598,392 - -0.8 1,598,392 - -2.1 1,598,397 + -0.3 1,598,434 + +0.1 1,598,471 - +0.3 1,598,474 + +0.8 1,598,474 + +0.4 1,598,475 - +0.1 1,598,475 - +0.2 1,598,502 - -0.8 1,598,508 + +0.3 1,598,508 + -0.1 1,598,509 - -0.8 1,598,547 - +0.5 1,598,585 - -0.3 1,598,610 - CA264_06915 0.12 -0.8 1,598,705 + CA264_06915 0.26 +0.2 1,598,705 + CA264_06915 0.26 -1.1 1,598,712 + CA264_06915 0.27 -0.6 1,598,745 + CA264_06915 0.32 -1.2 1,598,776 + CA264_06915 0.36 -0.4 1,598,776 + CA264_06915 0.36 -0.5 1,598,777 - CA264_06915 0.36 -0.8 1,598,777 - CA264_06915 0.36 -0.2 1,598,777 - CA264_06915 0.36 -0.0 1,598,782 + CA264_06915 0.37 -0.0 1,598,783 - CA264_06915 0.37 -0.9 1,598,864 - CA264_06915 0.49 +1.0 1,598,864 - CA264_06915 0.49 +0.2 1,598,864 - CA264_06915 0.49 -0.2 1,598,866 + CA264_06915 0.49 +0.1 1,598,874 + CA264_06915 0.50 -0.6 1,598,930 + CA264_06915 0.58 -0.4 1,598,949 + CA264_06915 0.61 -0.6 1,598,954 - CA264_06915 0.62 -0.5 1,598,968 + CA264_06915 0.64 -2.9 1,598,989 + CA264_06915 0.67 -0.7 1,598,989 + CA264_06915 0.67 -1.0 1,598,989 + CA264_06915 0.67 -0.6 1,598,990 - CA264_06915 0.67 +1.5 1,599,013 - CA264_06915 0.70 -1.0 1,599,059 + CA264_06915 0.77 -0.2 1,599,059 + CA264_06915 0.77 -0.9 1,599,094 + CA264_06915 0.82 -0.2 1,599,098 + CA264_06915 0.83 -0.5 1,599,099 - CA264_06915 0.83 +0.4 1,599,116 + CA264_06915 0.85 -0.1 1,599,141 + CA264_06915 0.89 -0.1 1,599,141 + CA264_06915 0.89 -0.9 1,599,142 - CA264_06915 0.89 +0.4 1,599,142 - CA264_06915 0.89 -0.2 1,599,181 + -0.5 1,599,182 - -0.3 1,599,228 + -0.7 1,599,229 - -0.1 1,599,251 + -0.5 1,599,349 - -0.8 1,599,368 - -1.0 1,599,368 - -0.2 1,599,394 + +0.1 1,599,522 + CA264_06920 0.15 +0.3 1,599,726 + CA264_06920 0.35 +0.4 1,599,727 - CA264_06920 0.35 -0.4 1,599,727 - CA264_06920 0.35 +0.3 1,599,737 + CA264_06920 0.36 +0.7 1,599,738 - CA264_06920 0.36 +0.3 1,599,893 + CA264_06920 0.51 -0.3 1,599,894 - CA264_06920 0.51 -0.6 1,599,894 - CA264_06920 0.51 -0.7 1,600,019 - CA264_06920 0.63 -1.2 1,600,047 + CA264_06920 0.65 -0.2 1,600,097 + CA264_06920 0.70 +2.6 1,600,119 - CA264_06920 0.72 -0.4 1,600,157 + CA264_06920 0.76 -0.1 1,600,181 + CA264_06920 0.78 -0.3 1,600,198 + CA264_06920 0.80 +0.0 1,600,199 - CA264_06920 0.80 -1.9 1,600,238 + CA264_06920 0.84 -0.7 1,600,238 + CA264_06920 0.84 -0.2 1,600,382 + -1.4 1,600,423 + -0.4 1,600,430 - -0.9 1,600,430 - -0.3 1,600,492 + +0.1 1,600,493 - -0.8 1,600,574 - +0.6 1,600,762 + CA264_06925 0.37 +1.2 1,600,762 + CA264_06925 0.37 +0.4 1,600,763 - CA264_06925 0.37 +0.8 1,600,895 + CA264_06925 0.58 +1.2 1,600,900 + CA264_06925 0.59 +2.4 1,600,903 - CA264_06925 0.60 -1.2 1,600,929 + CA264_06925 0.64 +0.0 1,601,099 - +0.1 1,601,147 + -0.0 1,601,147 + -0.3 1,601,148 - +0.3 1,601,148 - -0.1 1,601,148 - -0.2 1,601,148 - -0.5 1,601,151 + +0.3 1,601,151 + -0.3 1,601,151 + -0.5 1,601,151 + +0.9 1,601,151 + -0.2 1,601,152 - +0.2 1,601,152 - -0.6 1,601,161 + -0.2 1,601,172 + -1.2 1,601,192 + -0.2 1,601,193 - -0.8 1,601,193 - -0.1 1,601,259 + +0.1 1,601,259 + -0.1 1,601,301 - -1.8 1,601,357 + CA264_06930 0.11 -0.2 1,601,357 + CA264_06930 0.11 -0.0 1,601,358 - CA264_06930 0.11 -0.5
Or see this region's nucleotide sequence