Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06365

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06360 and CA264_06365 are separated by 32 nucleotidesCA264_06365 and CA264_06370 are separated by 81 nucleotides CA264_06360: CA264_06360 - L-histidine N(alpha)-methyltransferase, at 1,478,065 to 1,479,066 _06360 CA264_06365: CA264_06365 - hypothetical protein, at 1,479,099 to 1,480,313 _06365 CA264_06370: CA264_06370 - MATE family efflux transporter, at 1,480,395 to 1,481,738 _06370 Position (kb) 1479 1480 1481Strain fitness (log2 ratio) -1 0 1 2at 1478.248 kb on + strand, within CA264_06360at 1478.251 kb on + strand, within CA264_06360at 1478.251 kb on + strand, within CA264_06360at 1478.252 kb on - strand, within CA264_06360at 1478.252 kb on - strand, within CA264_06360at 1478.375 kb on + strand, within CA264_06360at 1478.375 kb on + strand, within CA264_06360at 1478.417 kb on - strand, within CA264_06360at 1478.417 kb on - strand, within CA264_06360at 1478.417 kb on - strand, within CA264_06360at 1478.516 kb on - strand, within CA264_06360at 1478.537 kb on + strand, within CA264_06360at 1478.547 kb on + strand, within CA264_06360at 1478.642 kb on - strand, within CA264_06360at 1478.681 kb on + strand, within CA264_06360at 1478.700 kb on - strand, within CA264_06360at 1478.703 kb on - strand, within CA264_06360at 1478.766 kb on + strand, within CA264_06360at 1478.767 kb on - strand, within CA264_06360at 1478.767 kb on - strand, within CA264_06360at 1478.794 kb on - strand, within CA264_06360at 1478.824 kb on + strand, within CA264_06360at 1478.824 kb on + strand, within CA264_06360at 1478.824 kb on + strand, within CA264_06360at 1478.824 kb on + strand, within CA264_06360at 1478.825 kb on - strand, within CA264_06360at 1478.825 kb on - strand, within CA264_06360at 1478.827 kb on - strand, within CA264_06360at 1478.882 kb on + strand, within CA264_06360at 1478.883 kb on - strand, within CA264_06360at 1478.956 kb on + strand, within CA264_06360at 1478.956 kb on + strand, within CA264_06360at 1478.956 kb on + strand, within CA264_06360at 1478.956 kb on + strand, within CA264_06360at 1478.957 kb on - strand, within CA264_06360at 1478.957 kb on - strand, within CA264_06360at 1479.020 kb on - strandat 1479.060 kb on + strandat 1479.064 kb on + strandat 1479.091 kb on + strandat 1479.091 kb on + strandat 1479.093 kb on + strandat 1479.094 kb on - strandat 1479.094 kb on - strandat 1479.161 kb on - strandat 1479.179 kb on - strandat 1479.179 kb on - strandat 1479.182 kb on + strandat 1479.183 kb on - strandat 1479.206 kb on + strandat 1479.207 kb on - strandat 1479.231 kb on + strand, within CA264_06365at 1479.236 kb on + strand, within CA264_06365at 1479.305 kb on + strand, within CA264_06365at 1479.362 kb on + strand, within CA264_06365at 1479.418 kb on - strand, within CA264_06365at 1479.504 kb on + strand, within CA264_06365at 1479.674 kb on - strand, within CA264_06365at 1479.700 kb on + strand, within CA264_06365at 1479.700 kb on + strand, within CA264_06365at 1479.701 kb on - strand, within CA264_06365at 1479.721 kb on + strand, within CA264_06365at 1479.721 kb on + strand, within CA264_06365at 1479.721 kb on + strand, within CA264_06365at 1479.722 kb on - strand, within CA264_06365at 1479.758 kb on + strand, within CA264_06365at 1479.803 kb on - strand, within CA264_06365at 1479.853 kb on + strand, within CA264_06365at 1479.854 kb on - strand, within CA264_06365at 1480.054 kb on - strand, within CA264_06365at 1480.054 kb on - strand, within CA264_06365at 1480.071 kb on + strand, within CA264_06365at 1480.071 kb on + strand, within CA264_06365at 1480.072 kb on - strand, within CA264_06365at 1480.072 kb on - strand, within CA264_06365at 1480.174 kb on - strand, within CA264_06365at 1480.174 kb on - strand, within CA264_06365at 1480.175 kb on + strand, within CA264_06365at 1480.200 kb on + strandat 1480.200 kb on + strandat 1480.200 kb on + strandat 1480.240 kb on + strandat 1480.378 kb on - strandat 1480.378 kb on - strandat 1480.382 kb on + strandat 1480.642 kb on - strand, within CA264_06370at 1480.719 kb on + strand, within CA264_06370at 1480.734 kb on + strand, within CA264_06370at 1480.734 kb on + strand, within CA264_06370at 1480.735 kb on - strand, within CA264_06370at 1480.738 kb on + strand, within CA264_06370at 1480.881 kb on + strand, within CA264_06370at 1480.882 kb on - strand, within CA264_06370at 1480.882 kb on - strand, within CA264_06370at 1480.895 kb on - strand, within CA264_06370at 1480.913 kb on - strand, within CA264_06370at 1480.913 kb on - strand, within CA264_06370at 1480.913 kb on - strand, within CA264_06370at 1480.991 kb on + strand, within CA264_06370at 1481.037 kb on + strand, within CA264_06370at 1481.038 kb on - strand, within CA264_06370at 1481.103 kb on + strand, within CA264_06370at 1481.103 kb on + strand, within CA264_06370at 1481.112 kb on + strand, within CA264_06370at 1481.180 kb on + strand, within CA264_06370at 1481.250 kb on + strand, within CA264_06370at 1481.251 kb on - strand, within CA264_06370at 1481.251 kb on - strand, within CA264_06370at 1481.251 kb on - strand, within CA264_06370at 1481.251 kb on - strand, within CA264_06370

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,478,248 + CA264_06360 0.18 -0.1
1,478,251 + CA264_06360 0.19 -0.8
1,478,251 + CA264_06360 0.19 +1.3
1,478,252 - CA264_06360 0.19 -0.4
1,478,252 - CA264_06360 0.19 -0.2
1,478,375 + CA264_06360 0.31 -1.3
1,478,375 + CA264_06360 0.31 -0.4
1,478,417 - CA264_06360 0.35 +1.0
1,478,417 - CA264_06360 0.35 -0.1
1,478,417 - CA264_06360 0.35 +0.8
1,478,516 - CA264_06360 0.45 +0.0
1,478,537 + CA264_06360 0.47 +0.3
1,478,547 + CA264_06360 0.48 +0.6
1,478,642 - CA264_06360 0.58 -0.7
1,478,681 + CA264_06360 0.61 -1.5
1,478,700 - CA264_06360 0.63 -0.3
1,478,703 - CA264_06360 0.64 -1.1
1,478,766 + CA264_06360 0.70 -0.9
1,478,767 - CA264_06360 0.70 +0.8
1,478,767 - CA264_06360 0.70 +1.3
1,478,794 - CA264_06360 0.73 +0.2
1,478,824 + CA264_06360 0.76 +0.1
1,478,824 + CA264_06360 0.76 -0.1
1,478,824 + CA264_06360 0.76 -0.5
1,478,824 + CA264_06360 0.76 -0.2
1,478,825 - CA264_06360 0.76 -0.5
1,478,825 - CA264_06360 0.76 -0.2
1,478,827 - CA264_06360 0.76 -0.4
1,478,882 + CA264_06360 0.82 +0.9
1,478,883 - CA264_06360 0.82 +0.3
1,478,956 + CA264_06360 0.89 +0.0
1,478,956 + CA264_06360 0.89 -1.1
1,478,956 + CA264_06360 0.89 -0.0
1,478,956 + CA264_06360 0.89 +0.1
1,478,957 - CA264_06360 0.89 +0.2
1,478,957 - CA264_06360 0.89 +0.2
1,479,020 - +0.7
1,479,060 + -0.6
1,479,064 + -1.3
1,479,091 + +0.2
1,479,091 + +0.2
1,479,093 + -0.5
1,479,094 - -0.5
1,479,094 - -1.0
1,479,161 - +0.1
1,479,179 - -0.6
1,479,179 - +0.0
1,479,182 + +1.9
1,479,183 - -1.1
1,479,206 + +0.1
1,479,207 - +0.1
1,479,231 + CA264_06365 0.11 -0.6
1,479,236 + CA264_06365 0.11 +0.1
1,479,305 + CA264_06365 0.17 +0.3
1,479,362 + CA264_06365 0.22 -1.0
1,479,418 - CA264_06365 0.26 +0.1
1,479,504 + CA264_06365 0.33 -0.5
1,479,674 - CA264_06365 0.47 +1.5
1,479,700 + CA264_06365 0.49 +1.4
1,479,700 + CA264_06365 0.49 +0.4
1,479,701 - CA264_06365 0.50 +1.4
1,479,721 + CA264_06365 0.51 +1.1
1,479,721 + CA264_06365 0.51 +0.9
1,479,721 + CA264_06365 0.51 -0.3
1,479,722 - CA264_06365 0.51 -0.5
1,479,758 + CA264_06365 0.54 +0.4
1,479,803 - CA264_06365 0.58 +0.4
1,479,853 + CA264_06365 0.62 +0.3
1,479,854 - CA264_06365 0.62 -0.1
1,480,054 - CA264_06365 0.79 -0.7
1,480,054 - CA264_06365 0.79 +0.6
1,480,071 + CA264_06365 0.80 -0.7
1,480,071 + CA264_06365 0.80 -0.6
1,480,072 - CA264_06365 0.80 -1.0
1,480,072 - CA264_06365 0.80 -1.5
1,480,174 - CA264_06365 0.88 +1.0
1,480,174 - CA264_06365 0.88 -0.3
1,480,175 + CA264_06365 0.89 +0.9
1,480,200 + +0.2
1,480,200 + +0.5
1,480,200 + -0.5
1,480,240 + +0.0
1,480,378 - +1.2
1,480,378 - +0.4
1,480,382 + +0.1
1,480,642 - CA264_06370 0.18 +0.4
1,480,719 + CA264_06370 0.24 -0.4
1,480,734 + CA264_06370 0.25 -0.8
1,480,734 + CA264_06370 0.25 -0.8
1,480,735 - CA264_06370 0.25 -0.3
1,480,738 + CA264_06370 0.26 -0.2
1,480,881 + CA264_06370 0.36 -0.3
1,480,882 - CA264_06370 0.36 -0.3
1,480,882 - CA264_06370 0.36 -1.2
1,480,895 - CA264_06370 0.37 -0.6
1,480,913 - CA264_06370 0.39 +1.1
1,480,913 - CA264_06370 0.39 -0.4
1,480,913 - CA264_06370 0.39 -0.6
1,480,991 + CA264_06370 0.44 -0.7
1,481,037 + CA264_06370 0.48 -0.4
1,481,038 - CA264_06370 0.48 -0.6
1,481,103 + CA264_06370 0.53 -0.4
1,481,103 + CA264_06370 0.53 -0.8
1,481,112 + CA264_06370 0.53 +2.4
1,481,180 + CA264_06370 0.58 +0.1
1,481,250 + CA264_06370 0.64 -0.7
1,481,251 - CA264_06370 0.64 +0.6
1,481,251 - CA264_06370 0.64 -0.3
1,481,251 - CA264_06370 0.64 -1.1
1,481,251 - CA264_06370 0.64 -0.8

Or see this region's nucleotide sequence