Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05575 and CA264_05580 are separated by 32 nucleotides CA264_05580 and CA264_05585 are separated by 249 nucleotides CA264_05585 and CA264_05590 are separated by 57 nucleotides
CA264_05575: CA264_05575 - hypothetical protein, at 1,296,628 to 1,298,721
_05575
CA264_05580: CA264_05580 - hypothetical protein, at 1,298,754 to 1,299,323
_05580
CA264_05585: CA264_05585 - pyridoxamine 5'-phosphate oxidase, at 1,299,573 to 1,300,220
_05585
CA264_05590: CA264_05590 - hypothetical protein, at 1,300,278 to 1,301,576
_05590
Position (kb)
1299
1300
1301 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1298.725 kb on + strand at 1298.725 kb on + strand at 1298.738 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.747 kb on - strand at 1298.841 kb on + strand, within CA264_05580 at 1298.841 kb on + strand, within CA264_05580 at 1298.862 kb on - strand, within CA264_05580 at 1298.880 kb on + strand, within CA264_05580 at 1298.881 kb on - strand, within CA264_05580 at 1299.022 kb on + strand, within CA264_05580 at 1299.076 kb on + strand, within CA264_05580 at 1299.092 kb on - strand, within CA264_05580 at 1299.092 kb on - strand, within CA264_05580 at 1299.225 kb on + strand, within CA264_05580 at 1299.226 kb on - strand, within CA264_05580 at 1299.279 kb on - strand at 1299.282 kb on + strand at 1299.282 kb on + strand at 1299.282 kb on + strand at 1299.282 kb on + strand at 1299.283 kb on - strand at 1299.283 kb on - strand at 1299.341 kb on - strand at 1299.341 kb on - strand at 1299.341 kb on - strand at 1299.378 kb on + strand at 1299.400 kb on + strand at 1299.401 kb on - strand at 1299.410 kb on - strand at 1299.444 kb on + strand at 1299.468 kb on + strand at 1299.473 kb on + strand at 1299.473 kb on + strand at 1299.473 kb on + strand at 1299.477 kb on - strand at 1299.477 kb on - strand at 1299.477 kb on - strand at 1299.480 kb on + strand at 1299.480 kb on + strand at 1299.481 kb on - strand at 1299.481 kb on - strand at 1299.482 kb on + strand at 1299.482 kb on + strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.523 kb on - strand at 1299.581 kb on - strand at 1300.289 kb on - strand at 1300.289 kb on - strand at 1300.289 kb on - strand at 1300.597 kb on + strand, within CA264_05590 at 1300.598 kb on - strand, within CA264_05590 at 1300.606 kb on - strand, within CA264_05590 at 1300.752 kb on + strand, within CA264_05590 at 1300.752 kb on + strand, within CA264_05590 at 1300.752 kb on + strand, within CA264_05590
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,298,725 + -0.5 1,298,725 + -2.4 1,298,738 - -2.1 1,298,745 - -1.1 1,298,745 - -1.2 1,298,745 - +2.8 1,298,745 - +0.2 1,298,745 - -0.7 1,298,745 - -0.3 1,298,747 - -0.3 1,298,841 + CA264_05580 0.15 -0.2 1,298,841 + CA264_05580 0.15 -0.6 1,298,862 - CA264_05580 0.19 +0.8 1,298,880 + CA264_05580 0.22 +0.9 1,298,881 - CA264_05580 0.22 -0.2 1,299,022 + CA264_05580 0.47 +0.2 1,299,076 + CA264_05580 0.56 +0.0 1,299,092 - CA264_05580 0.59 +0.3 1,299,092 - CA264_05580 0.59 +0.5 1,299,225 + CA264_05580 0.83 -0.0 1,299,226 - CA264_05580 0.83 +0.9 1,299,279 - +0.1 1,299,282 + -1.0 1,299,282 + +0.1 1,299,282 + -0.6 1,299,282 + -0.6 1,299,283 - -1.2 1,299,283 - -0.2 1,299,341 - +1.7 1,299,341 - +1.3 1,299,341 - +1.2 1,299,378 + -0.5 1,299,400 + -0.3 1,299,401 - +0.8 1,299,410 - +0.6 1,299,444 + +1.0 1,299,468 + +0.5 1,299,473 + -0.3 1,299,473 + +0.1 1,299,473 + -0.2 1,299,477 - -0.8 1,299,477 - +0.3 1,299,477 - -0.6 1,299,480 + -0.3 1,299,480 + -1.3 1,299,481 - +0.3 1,299,481 - +2.4 1,299,482 + -1.0 1,299,482 + -2.3 1,299,486 - -0.7 1,299,486 - +0.2 1,299,486 - +0.3 1,299,486 - +0.6 1,299,486 - +0.2 1,299,523 - +2.5 1,299,581 - +0.1 1,300,289 - -0.8 1,300,289 - -1.1 1,300,289 - +0.3 1,300,597 + CA264_05590 0.25 +1.0 1,300,598 - CA264_05590 0.25 +1.0 1,300,606 - CA264_05590 0.25 -0.2 1,300,752 + CA264_05590 0.36 +1.2 1,300,752 + CA264_05590 0.36 -0.3 1,300,752 + CA264_05590 0.36 +1.0
Or see this region's nucleotide sequence