Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05585

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_05575 and CA264_05580 are separated by 32 nucleotidesCA264_05580 and CA264_05585 are separated by 249 nucleotidesCA264_05585 and CA264_05590 are separated by 57 nucleotides CA264_05575: CA264_05575 - hypothetical protein, at 1,296,628 to 1,298,721 _05575 CA264_05580: CA264_05580 - hypothetical protein, at 1,298,754 to 1,299,323 _05580 CA264_05585: CA264_05585 - pyridoxamine 5'-phosphate oxidase, at 1,299,573 to 1,300,220 _05585 CA264_05590: CA264_05590 - hypothetical protein, at 1,300,278 to 1,301,576 _05590 Position (kb) 1299 1300 1301Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1298.725 kb on + strandat 1298.725 kb on + strandat 1298.738 kb on - strandat 1298.745 kb on - strandat 1298.745 kb on - strandat 1298.745 kb on - strandat 1298.745 kb on - strandat 1298.745 kb on - strandat 1298.745 kb on - strandat 1298.747 kb on - strandat 1298.841 kb on + strand, within CA264_05580at 1298.841 kb on + strand, within CA264_05580at 1298.862 kb on - strand, within CA264_05580at 1298.880 kb on + strand, within CA264_05580at 1298.881 kb on - strand, within CA264_05580at 1299.022 kb on + strand, within CA264_05580at 1299.076 kb on + strand, within CA264_05580at 1299.092 kb on - strand, within CA264_05580at 1299.092 kb on - strand, within CA264_05580at 1299.225 kb on + strand, within CA264_05580at 1299.226 kb on - strand, within CA264_05580at 1299.279 kb on - strandat 1299.282 kb on + strandat 1299.282 kb on + strandat 1299.282 kb on + strandat 1299.282 kb on + strandat 1299.283 kb on - strandat 1299.283 kb on - strandat 1299.341 kb on - strandat 1299.341 kb on - strandat 1299.341 kb on - strandat 1299.378 kb on + strandat 1299.400 kb on + strandat 1299.401 kb on - strandat 1299.410 kb on - strandat 1299.444 kb on + strandat 1299.468 kb on + strandat 1299.473 kb on + strandat 1299.473 kb on + strandat 1299.473 kb on + strandat 1299.477 kb on - strandat 1299.477 kb on - strandat 1299.477 kb on - strandat 1299.480 kb on + strandat 1299.480 kb on + strandat 1299.481 kb on - strandat 1299.481 kb on - strandat 1299.482 kb on + strandat 1299.482 kb on + strandat 1299.486 kb on - strandat 1299.486 kb on - strandat 1299.486 kb on - strandat 1299.486 kb on - strandat 1299.486 kb on - strandat 1299.523 kb on - strandat 1299.581 kb on - strandat 1300.289 kb on - strandat 1300.289 kb on - strandat 1300.289 kb on - strandat 1300.597 kb on + strand, within CA264_05590at 1300.598 kb on - strand, within CA264_05590at 1300.606 kb on - strand, within CA264_05590at 1300.752 kb on + strand, within CA264_05590at 1300.752 kb on + strand, within CA264_05590at 1300.752 kb on + strand, within CA264_05590

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,298,725 + -0.5
1,298,725 + -2.4
1,298,738 - -2.1
1,298,745 - -1.1
1,298,745 - -1.2
1,298,745 - +2.8
1,298,745 - +0.2
1,298,745 - -0.7
1,298,745 - -0.3
1,298,747 - -0.3
1,298,841 + CA264_05580 0.15 -0.2
1,298,841 + CA264_05580 0.15 -0.6
1,298,862 - CA264_05580 0.19 +0.8
1,298,880 + CA264_05580 0.22 +0.9
1,298,881 - CA264_05580 0.22 -0.2
1,299,022 + CA264_05580 0.47 +0.2
1,299,076 + CA264_05580 0.56 +0.0
1,299,092 - CA264_05580 0.59 +0.3
1,299,092 - CA264_05580 0.59 +0.5
1,299,225 + CA264_05580 0.83 -0.0
1,299,226 - CA264_05580 0.83 +0.9
1,299,279 - +0.1
1,299,282 + -1.0
1,299,282 + +0.1
1,299,282 + -0.6
1,299,282 + -0.6
1,299,283 - -1.2
1,299,283 - -0.2
1,299,341 - +1.7
1,299,341 - +1.3
1,299,341 - +1.2
1,299,378 + -0.5
1,299,400 + -0.3
1,299,401 - +0.8
1,299,410 - +0.6
1,299,444 + +1.0
1,299,468 + +0.5
1,299,473 + -0.3
1,299,473 + +0.1
1,299,473 + -0.2
1,299,477 - -0.8
1,299,477 - +0.3
1,299,477 - -0.6
1,299,480 + -0.3
1,299,480 + -1.3
1,299,481 - +0.3
1,299,481 - +2.4
1,299,482 + -1.0
1,299,482 + -2.3
1,299,486 - -0.7
1,299,486 - +0.2
1,299,486 - +0.3
1,299,486 - +0.6
1,299,486 - +0.2
1,299,523 - +2.5
1,299,581 - +0.1
1,300,289 - -0.8
1,300,289 - -1.1
1,300,289 - +0.3
1,300,597 + CA264_05590 0.25 +1.0
1,300,598 - CA264_05590 0.25 +1.0
1,300,606 - CA264_05590 0.25 -0.2
1,300,752 + CA264_05590 0.36 +1.2
1,300,752 + CA264_05590 0.36 -0.3
1,300,752 + CA264_05590 0.36 +1.0

Or see this region's nucleotide sequence