Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02705

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02700 and CA264_02705 are separated by 93 nucleotidesCA264_02705 and CA264_02710 are separated by 250 nucleotides CA264_02700: CA264_02700 - TIGR02453 family protein, at 623,135 to 623,821 _02700 CA264_02705: CA264_02705 - hypothetical protein, at 623,915 to 624,976 _02705 CA264_02710: CA264_02710 - hypothetical protein, at 625,227 to 626,603 _02710 Position (kb) 623 624 625Strain fitness (log2 ratio) -2 -1 0 1 2at 622.920 kb on + strandat 622.939 kb on + strandat 622.958 kb on + strandat 622.958 kb on + strandat 622.959 kb on - strandat 622.991 kb on + strandat 622.991 kb on + strandat 622.992 kb on - strandat 623.017 kb on + strandat 623.018 kb on - strandat 623.034 kb on + strandat 623.034 kb on + strandat 623.034 kb on + strandat 623.035 kb on - strandat 623.037 kb on - strandat 623.041 kb on - strandat 623.041 kb on - strandat 623.112 kb on + strandat 623.149 kb on - strandat 623.149 kb on - strandat 623.158 kb on + strandat 623.165 kb on - strandat 623.191 kb on + strandat 623.192 kb on - strandat 623.275 kb on - strand, within CA264_02700at 623.368 kb on + strand, within CA264_02700at 623.399 kb on + strand, within CA264_02700at 623.419 kb on + strand, within CA264_02700at 623.442 kb on - strand, within CA264_02700at 623.442 kb on - strand, within CA264_02700at 623.464 kb on + strand, within CA264_02700at 623.465 kb on - strand, within CA264_02700at 623.512 kb on - strand, within CA264_02700at 623.540 kb on - strand, within CA264_02700at 623.636 kb on + strand, within CA264_02700at 623.663 kb on + strand, within CA264_02700at 623.664 kb on - strandat 623.692 kb on - strand, within CA264_02700at 623.819 kb on + strandat 623.819 kb on + strandat 623.820 kb on - strandat 623.820 kb on - strandat 623.824 kb on + strandat 623.824 kb on + strandat 623.825 kb on - strandat 623.865 kb on - strandat 623.907 kb on - strandat 623.907 kb on - strandat 623.907 kb on - strandat 623.916 kb on + strandat 623.917 kb on - strandat 623.917 kb on - strandat 623.938 kb on - strandat 623.994 kb on - strandat 623.994 kb on - strandat 624.066 kb on + strand, within CA264_02705at 624.099 kb on - strand, within CA264_02705at 624.121 kb on - strand, within CA264_02705at 624.123 kb on + strand, within CA264_02705at 624.124 kb on - strand, within CA264_02705at 624.124 kb on - strand, within CA264_02705at 624.124 kb on - strand, within CA264_02705at 624.143 kb on + strand, within CA264_02705at 624.187 kb on - strand, within CA264_02705at 624.191 kb on + strand, within CA264_02705at 624.191 kb on + strand, within CA264_02705at 624.192 kb on - strand, within CA264_02705at 624.215 kb on + strand, within CA264_02705at 624.242 kb on + strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.243 kb on - strand, within CA264_02705at 624.251 kb on - strand, within CA264_02705at 624.253 kb on - strand, within CA264_02705at 624.279 kb on + strand, within CA264_02705at 624.280 kb on - strand, within CA264_02705at 624.322 kb on + strand, within CA264_02705at 624.323 kb on - strand, within CA264_02705at 624.323 kb on - strand, within CA264_02705at 624.324 kb on + strand, within CA264_02705at 624.325 kb on - strand, within CA264_02705at 624.325 kb on - strand, within CA264_02705at 624.345 kb on - strand, within CA264_02705at 624.373 kb on - strand, within CA264_02705at 624.424 kb on - strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.427 kb on + strand, within CA264_02705at 624.428 kb on - strand, within CA264_02705at 624.428 kb on - strand, within CA264_02705at 624.432 kb on + strand, within CA264_02705at 624.490 kb on - strand, within CA264_02705at 624.532 kb on + strand, within CA264_02705at 624.533 kb on - strand, within CA264_02705at 624.549 kb on + strand, within CA264_02705at 624.549 kb on + strand, within CA264_02705at 624.608 kb on + strand, within CA264_02705at 624.654 kb on + strand, within CA264_02705at 624.654 kb on + strand, within CA264_02705at 624.654 kb on + strand, within CA264_02705at 624.692 kb on + strand, within CA264_02705at 624.693 kb on - strand, within CA264_02705at 624.694 kb on + strand, within CA264_02705at 624.695 kb on - strand, within CA264_02705at 624.695 kb on - strand, within CA264_02705at 624.697 kb on + strand, within CA264_02705at 624.698 kb on - strand, within CA264_02705at 624.698 kb on - strand, within CA264_02705at 624.753 kb on - strand, within CA264_02705at 624.810 kb on + strand, within CA264_02705at 624.832 kb on - strand, within CA264_02705at 624.835 kb on + strand, within CA264_02705at 624.836 kb on - strand, within CA264_02705at 624.836 kb on - strand, within CA264_02705at 624.840 kb on - strand, within CA264_02705at 624.888 kb on + strandat 624.890 kb on + strandat 624.890 kb on + strandat 624.891 kb on - strandat 624.891 kb on - strandat 624.891 kb on - strandat 624.891 kb on - strandat 624.933 kb on + strandat 624.946 kb on + strandat 624.953 kb on + strandat 624.954 kb on - strandat 624.981 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 624.991 kb on + strandat 625.003 kb on - strandat 625.003 kb on - strandat 625.022 kb on - strandat 625.097 kb on - strandat 625.146 kb on - strandat 625.149 kb on + strandat 625.150 kb on - strandat 625.150 kb on - strandat 625.192 kb on - strandat 625.192 kb on - strandat 625.192 kb on - strandat 625.279 kb on + strandat 625.372 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.376 kb on + strand, within CA264_02710at 625.380 kb on + strand, within CA264_02710at 625.380 kb on + strand, within CA264_02710at 625.381 kb on - strand, within CA264_02710at 625.401 kb on - strand, within CA264_02710at 625.453 kb on + strand, within CA264_02710at 625.487 kb on - strand, within CA264_02710at 625.495 kb on - strand, within CA264_02710at 625.508 kb on + strand, within CA264_02710at 625.508 kb on + strand, within CA264_02710at 625.510 kb on + strand, within CA264_02710at 625.566 kb on - strand, within CA264_02710at 625.611 kb on - strand, within CA264_02710at 625.654 kb on + strand, within CA264_02710at 625.654 kb on + strand, within CA264_02710at 625.654 kb on + strand, within CA264_02710at 625.655 kb on - strand, within CA264_02710at 625.657 kb on + strand, within CA264_02710at 625.657 kb on + strand, within CA264_02710at 625.658 kb on - strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.659 kb on + strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.660 kb on - strand, within CA264_02710at 625.691 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.701 kb on - strand, within CA264_02710at 625.703 kb on + strand, within CA264_02710at 625.753 kb on - strand, within CA264_02710at 625.782 kb on - strand, within CA264_02710at 625.783 kb on + strand, within CA264_02710at 625.901 kb on - strand, within CA264_02710at 625.903 kb on + strand, within CA264_02710at 625.904 kb on - strand, within CA264_02710at 625.904 kb on - strand, within CA264_02710

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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622,920 + -0.4
622,939 + -0.8
622,958 + -0.3
622,958 + -0.2
622,959 - -0.4
622,991 + -0.4
622,991 + -0.1
622,992 - -0.9
623,017 + +0.0
623,018 - +0.5
623,034 + +0.3
623,034 + +2.0
623,034 + -1.2
623,035 - -1.1
623,037 - -0.2
623,041 - +0.2
623,041 - -0.4
623,112 + +1.1
623,149 - +0.8
623,149 - -0.1
623,158 + -0.1
623,165 - -0.3
623,191 + -0.6
623,192 - -0.3
623,275 - CA264_02700 0.20 -0.1
623,368 + CA264_02700 0.34 -0.4
623,399 + CA264_02700 0.38 +0.1
623,419 + CA264_02700 0.41 +0.5
623,442 - CA264_02700 0.45 -0.7
623,442 - CA264_02700 0.45 +0.9
623,464 + CA264_02700 0.48 -0.5
623,465 - CA264_02700 0.48 -0.3
623,512 - CA264_02700 0.55 +0.7
623,540 - CA264_02700 0.59 +0.1
623,636 + CA264_02700 0.73 +0.0
623,663 + CA264_02700 0.77 -0.2
623,664 - +1.7
623,692 - CA264_02700 0.81 -0.5
623,819 + -0.1
623,819 + +0.0
623,820 - +0.8
623,820 - -0.6
623,824 + -0.4
623,824 + -0.7
623,825 - +0.1
623,865 - +0.2
623,907 - -0.4
623,907 - +2.0
623,907 - -0.8
623,916 + +0.2
623,917 - -0.4
623,917 - +0.0
623,938 - +1.7
623,994 - -0.2
623,994 - +0.4
624,066 + CA264_02705 0.14 -0.3
624,099 - CA264_02705 0.17 -0.3
624,121 - CA264_02705 0.19 -0.9
624,123 + CA264_02705 0.20 -0.3
624,124 - CA264_02705 0.20 -0.5
624,124 - CA264_02705 0.20 +0.1
624,124 - CA264_02705 0.20 +1.3
624,143 + CA264_02705 0.21 +0.3
624,187 - CA264_02705 0.26 -1.4
624,191 + CA264_02705 0.26 +0.7
624,191 + CA264_02705 0.26 +0.7
624,192 - CA264_02705 0.26 -0.5
624,215 + CA264_02705 0.28 -1.4
624,242 + CA264_02705 0.31 -0.9
624,243 - CA264_02705 0.31 +0.1
624,243 - CA264_02705 0.31 -0.6
624,243 - CA264_02705 0.31 +0.1
624,243 - CA264_02705 0.31 -2.3
624,243 - CA264_02705 0.31 -0.7
624,243 - CA264_02705 0.31 +0.5
624,251 - CA264_02705 0.32 +1.0
624,253 - CA264_02705 0.32 -0.1
624,279 + CA264_02705 0.34 -0.4
624,280 - CA264_02705 0.34 -0.4
624,322 + CA264_02705 0.38 -0.5
624,323 - CA264_02705 0.38 +0.1
624,323 - CA264_02705 0.38 +0.0
624,324 + CA264_02705 0.39 -1.6
624,325 - CA264_02705 0.39 -0.5
624,325 - CA264_02705 0.39 +0.6
624,345 - CA264_02705 0.40 +0.4
624,373 - CA264_02705 0.43 -0.5
624,424 - CA264_02705 0.48 -1.1
624,427 + CA264_02705 0.48 -2.2
624,427 + CA264_02705 0.48 -0.5
624,427 + CA264_02705 0.48 -1.6
624,427 + CA264_02705 0.48 -1.3
624,428 - CA264_02705 0.48 -0.7
624,428 - CA264_02705 0.48 -0.2
624,432 + CA264_02705 0.49 -0.5
624,490 - CA264_02705 0.54 -0.2
624,532 + CA264_02705 0.58 +0.4
624,533 - CA264_02705 0.58 -1.1
624,549 + CA264_02705 0.60 +0.1
624,549 + CA264_02705 0.60 +0.7
624,608 + CA264_02705 0.65 -0.5
624,654 + CA264_02705 0.70 +0.1
624,654 + CA264_02705 0.70 +0.9
624,654 + CA264_02705 0.70 +0.5
624,692 + CA264_02705 0.73 -0.3
624,693 - CA264_02705 0.73 -1.1
624,694 + CA264_02705 0.73 -1.8
624,695 - CA264_02705 0.73 +0.7
624,695 - CA264_02705 0.73 +0.2
624,697 + CA264_02705 0.74 -0.2
624,698 - CA264_02705 0.74 -0.2
624,698 - CA264_02705 0.74 -1.5
624,753 - CA264_02705 0.79 -1.0
624,810 + CA264_02705 0.84 -0.6
624,832 - CA264_02705 0.86 -0.3
624,835 + CA264_02705 0.87 +0.1
624,836 - CA264_02705 0.87 +0.7
624,836 - CA264_02705 0.87 -0.4
624,840 - CA264_02705 0.87 +0.9
624,888 + -0.9
624,890 + +0.5
624,890 + -1.4
624,891 - -0.3
624,891 - -0.9
624,891 - -0.3
624,891 - +0.1
624,933 + -1.2
624,946 + +0.7
624,953 + -0.7
624,954 - +0.4
624,981 + -1.0
624,991 + -1.1
624,991 + -0.4
624,991 + -0.5
624,991 + -0.6
624,991 + -0.6
625,003 - +0.8
625,003 - +1.3
625,022 - -1.0
625,097 - -0.3
625,146 - -0.8
625,149 + +0.0
625,150 - -0.7
625,150 - -0.0
625,192 - -1.4
625,192 - +0.0
625,192 - -0.6
625,279 + -1.3
625,372 + CA264_02710 0.11 -0.1
625,376 + CA264_02710 0.11 -0.8
625,376 + CA264_02710 0.11 -0.1
625,376 + CA264_02710 0.11 -0.7
625,376 + CA264_02710 0.11 -1.0
625,380 + CA264_02710 0.11 +0.1
625,380 + CA264_02710 0.11 -1.2
625,381 - CA264_02710 0.11 -0.6
625,401 - CA264_02710 0.13 +1.0
625,453 + CA264_02710 0.16 -1.0
625,487 - CA264_02710 0.19 -0.0
625,495 - CA264_02710 0.19 -1.0
625,508 + CA264_02710 0.20 -0.9
625,508 + CA264_02710 0.20 -0.8
625,510 + CA264_02710 0.21 +0.0
625,566 - CA264_02710 0.25 -0.4
625,611 - CA264_02710 0.28 -0.5
625,654 + CA264_02710 0.31 +0.4
625,654 + CA264_02710 0.31 -0.3
625,654 + CA264_02710 0.31 -0.7
625,655 - CA264_02710 0.31 +0.4
625,657 + CA264_02710 0.31 -2.1
625,657 + CA264_02710 0.31 +0.6
625,658 - CA264_02710 0.31 -0.9
625,659 + CA264_02710 0.31 -0.5
625,659 + CA264_02710 0.31 +0.5
625,659 + CA264_02710 0.31 +1.0
625,659 + CA264_02710 0.31 -0.3
625,660 - CA264_02710 0.31 -1.0
625,660 - CA264_02710 0.31 -1.5
625,660 - CA264_02710 0.31 -0.7
625,660 - CA264_02710 0.31 -1.2
625,660 - CA264_02710 0.31 -1.0
625,660 - CA264_02710 0.31 -0.4
625,660 - CA264_02710 0.31 -0.3
625,691 - CA264_02710 0.34 +0.2
625,701 - CA264_02710 0.34 +0.5
625,701 - CA264_02710 0.34 -0.7
625,701 - CA264_02710 0.34 -0.7
625,701 - CA264_02710 0.34 +1.4
625,701 - CA264_02710 0.34 -0.1
625,703 + CA264_02710 0.35 -0.1
625,753 - CA264_02710 0.38 -0.6
625,782 - CA264_02710 0.40 +0.3
625,783 + CA264_02710 0.40 -0.1
625,901 - CA264_02710 0.49 -0.4
625,903 + CA264_02710 0.49 -0.4
625,904 - CA264_02710 0.49 +0.3
625,904 - CA264_02710 0.49 -0.4

Or see this region's nucleotide sequence