Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02515 and CA264_02520 are separated by 99 nucleotides CA264_02520 and CA264_02525 are separated by 24 nucleotides CA264_02525 and CA264_02530 are separated by 111 nucleotides
CA264_02515: CA264_02515 - nitrite reductase, at 586,848 to 588,941
_02515
CA264_02520: CA264_02520 - uroporphyrinogen-III C-methyltransferase, at 589,041 to 589,877
_02520
CA264_02525: CA264_02525 - siroheme synthase, at 589,902 to 591,431
_02525
CA264_02530: CA264_02530 - O-succinylhomoserine sulfhydrylase, at 591,543 to 592,706
_02530
Position (kb) 589
590
591
592 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 588.972 kb on - strand at 588.996 kb on + strand at 588.997 kb on - strand at 589.063 kb on + strand at 589.070 kb on + strand at 589.070 kb on + strand at 589.107 kb on + strand at 589.107 kb on + strand at 589.109 kb on + strand at 589.133 kb on - strand, within CA264_02520 at 589.133 kb on - strand, within CA264_02520 at 589.237 kb on + strand, within CA264_02520 at 589.242 kb on + strand, within CA264_02520 at 589.267 kb on + strand, within CA264_02520 at 589.315 kb on + strand, within CA264_02520 at 589.469 kb on + strand, within CA264_02520 at 589.507 kb on + strand, within CA264_02520 at 589.507 kb on + strand, within CA264_02520 at 589.508 kb on - strand, within CA264_02520 at 589.538 kb on + strand, within CA264_02520 at 589.539 kb on - strand, within CA264_02520 at 589.577 kb on - strand, within CA264_02520 at 589.610 kb on - strand, within CA264_02520 at 589.610 kb on - strand, within CA264_02520 at 589.624 kb on + strand, within CA264_02520 at 589.629 kb on - strand, within CA264_02520 at 589.629 kb on - strand, within CA264_02520 at 589.676 kb on + strand, within CA264_02520 at 589.676 kb on + strand, within CA264_02520 at 589.677 kb on - strand, within CA264_02520 at 589.691 kb on - strand, within CA264_02520 at 589.742 kb on + strand, within CA264_02520 at 589.743 kb on - strand, within CA264_02520 at 589.746 kb on - strand, within CA264_02520 at 589.746 kb on - strand, within CA264_02520 at 589.749 kb on - strand, within CA264_02520 at 589.811 kb on + strand at 589.811 kb on + strand at 589.811 kb on + strand at 589.812 kb on - strand at 589.812 kb on - strand at 589.815 kb on + strand at 589.815 kb on + strand at 589.873 kb on + strand at 589.874 kb on - strand at 589.874 kb on - strand at 589.874 kb on - strand at 589.875 kb on + strand at 589.876 kb on - strand at 589.876 kb on - strand at 589.879 kb on + strand at 589.881 kb on + strand at 589.881 kb on + strand at 589.897 kb on + strand at 589.926 kb on - strand at 590.058 kb on - strand, within CA264_02525 at 590.059 kb on + strand, within CA264_02525 at 590.086 kb on + strand, within CA264_02525 at 590.086 kb on + strand, within CA264_02525 at 590.086 kb on + strand, within CA264_02525 at 590.149 kb on + strand, within CA264_02525 at 590.150 kb on - strand, within CA264_02525 at 590.444 kb on + strand, within CA264_02525 at 590.655 kb on - strand, within CA264_02525 at 590.672 kb on - strand, within CA264_02525 at 590.684 kb on - strand, within CA264_02525 at 590.732 kb on + strand, within CA264_02525 at 590.824 kb on + strand, within CA264_02525 at 590.888 kb on - strand, within CA264_02525 at 590.895 kb on - strand, within CA264_02525 at 590.895 kb on - strand, within CA264_02525 at 590.950 kb on - strand, within CA264_02525 at 591.020 kb on - strand, within CA264_02525 at 591.209 kb on - strand, within CA264_02525 at 591.374 kb on - strand at 591.400 kb on + strand at 591.519 kb on + strand at 591.536 kb on + strand at 591.543 kb on - strand at 591.591 kb on + strand at 591.608 kb on - strand at 591.608 kb on - strand at 591.613 kb on + strand at 591.615 kb on + strand at 591.615 kb on + strand at 591.615 kb on + strand at 591.616 kb on - strand at 591.616 kb on - strand at 591.619 kb on + strand at 591.694 kb on - strand, within CA264_02530 at 591.718 kb on + strand, within CA264_02530 at 591.809 kb on - strand, within CA264_02530 at 591.809 kb on - strand, within CA264_02530 at 591.913 kb on - strand, within CA264_02530 at 591.913 kb on - strand, within CA264_02530 at 591.914 kb on + strand, within CA264_02530 at 591.914 kb on + strand, within CA264_02530 at 591.915 kb on - strand, within CA264_02530 at 591.915 kb on - strand, within CA264_02530 at 591.919 kb on - strand, within CA264_02530 at 591.977 kb on + strand, within CA264_02530 at 591.977 kb on + strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.979 kb on + strand, within CA264_02530 at 591.979 kb on + strand, within CA264_02530 at 591.979 kb on + strand, within CA264_02530 at 591.980 kb on - strand, within CA264_02530 at 591.984 kb on - strand, within CA264_02530 at 591.998 kb on + strand, within CA264_02530 at 592.015 kb on + strand, within CA264_02530 at 592.056 kb on - strand, within CA264_02530 at 592.067 kb on + strand at 592.067 kb on + strand, within CA264_02530 at 592.068 kb on - strand, within CA264_02530 at 592.069 kb on + strand, within CA264_02530 at 592.077 kb on - strand, within CA264_02530 at 592.077 kb on - strand, within CA264_02530 at 592.152 kb on + strand, within CA264_02530 at 592.152 kb on + strand, within CA264_02530 at 592.154 kb on + strand, within CA264_02530 at 592.155 kb on - strand, within CA264_02530 at 592.192 kb on + strand, within CA264_02530 at 592.192 kb on + strand, within CA264_02530 at 592.193 kb on - strand, within CA264_02530 at 592.196 kb on + strand, within CA264_02530 at 592.280 kb on + strand, within CA264_02530 at 592.383 kb on + strand, within CA264_02530
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 588,972 - -1.6 588,996 + -1.6 588,997 - -1.5 589,063 + +1.3 589,070 + +1.5 589,070 + +1.6 589,107 + +1.9 589,107 + +1.3 589,109 + +0.3 589,133 - CA264_02520 0.11 +1.5 589,133 - CA264_02520 0.11 +1.4 589,237 + CA264_02520 0.23 +2.0 589,242 + CA264_02520 0.24 +1.8 589,267 + CA264_02520 0.27 +0.2 589,315 + CA264_02520 0.33 +1.5 589,469 + CA264_02520 0.51 +1.3 589,507 + CA264_02520 0.56 +1.8 589,507 + CA264_02520 0.56 +1.9 589,508 - CA264_02520 0.56 +1.1 589,538 + CA264_02520 0.59 +1.5 589,539 - CA264_02520 0.59 +1.1 589,577 - CA264_02520 0.64 +1.7 589,610 - CA264_02520 0.68 +1.6 589,610 - CA264_02520 0.68 +1.5 589,624 + CA264_02520 0.70 +3.6 589,629 - CA264_02520 0.70 +2.1 589,629 - CA264_02520 0.70 +1.9 589,676 + CA264_02520 0.76 +1.6 589,676 + CA264_02520 0.76 +1.6 589,677 - CA264_02520 0.76 +1.7 589,691 - CA264_02520 0.78 +2.1 589,742 + CA264_02520 0.84 +1.3 589,743 - CA264_02520 0.84 +2.8 589,746 - CA264_02520 0.84 +1.7 589,746 - CA264_02520 0.84 +2.0 589,749 - CA264_02520 0.85 +2.3 589,811 + -0.5 589,811 + -0.2 589,811 + -0.4 589,812 - -1.6 589,812 - -0.9 589,815 + +0.7 589,815 + -1.9 589,873 + -1.4 589,874 - -0.5 589,874 - +0.0 589,874 - -0.9 589,875 + -1.3 589,876 - -0.8 589,876 - +1.0 589,879 + +0.2 589,881 + -0.9 589,881 + -1.2 589,897 + +1.2 589,926 - +1.8 590,058 - CA264_02525 0.10 +3.1 590,059 + CA264_02525 0.10 +2.0 590,086 + CA264_02525 0.12 +1.5 590,086 + CA264_02525 0.12 +1.4 590,086 + CA264_02525 0.12 +2.8 590,149 + CA264_02525 0.16 +1.8 590,150 - CA264_02525 0.16 +2.0 590,444 + CA264_02525 0.35 +2.2 590,655 - CA264_02525 0.49 +2.0 590,672 - CA264_02525 0.50 -2.3 590,684 - CA264_02525 0.51 -0.9 590,732 + CA264_02525 0.54 +2.9 590,824 + CA264_02525 0.60 +2.7 590,888 - CA264_02525 0.64 +3.0 590,895 - CA264_02525 0.65 +2.8 590,895 - CA264_02525 0.65 -0.8 590,950 - CA264_02525 0.68 +1.9 591,020 - CA264_02525 0.73 +3.2 591,209 - CA264_02525 0.85 +3.6 591,374 - +2.9 591,400 + +3.1 591,519 + -0.6 591,536 + +0.9 591,543 - +1.6 591,591 + +1.0 591,608 - +0.7 591,608 - +0.6 591,613 + -1.0 591,615 + +0.1 591,615 + +1.0 591,615 + +0.9 591,616 - +1.4 591,616 - +1.1 591,619 + -0.3 591,694 - CA264_02530 0.13 +1.1 591,718 + CA264_02530 0.15 -0.9 591,809 - CA264_02530 0.23 +0.7 591,809 - CA264_02530 0.23 +2.7 591,913 - CA264_02530 0.32 +1.0 591,913 - CA264_02530 0.32 +0.8 591,914 + CA264_02530 0.32 -0.1 591,914 + CA264_02530 0.32 -0.4 591,915 - CA264_02530 0.32 +0.2 591,915 - CA264_02530 0.32 +1.2 591,919 - CA264_02530 0.32 +0.5 591,977 + CA264_02530 0.37 -0.0 591,977 + CA264_02530 0.37 -0.4 591,978 - CA264_02530 0.37 +0.4 591,978 - CA264_02530 0.37 +0.8 591,978 - CA264_02530 0.37 +1.1 591,978 - CA264_02530 0.37 -0.3 591,979 + CA264_02530 0.37 -0.7 591,979 + CA264_02530 0.37 +0.9 591,979 + CA264_02530 0.37 +0.0 591,980 - CA264_02530 0.38 +0.5 591,984 - CA264_02530 0.38 +1.2 591,998 + CA264_02530 0.39 +0.2 592,015 + CA264_02530 0.41 +0.6 592,056 - CA264_02530 0.44 +1.5 592,067 + +2.2 592,067 + CA264_02530 0.45 -0.3 592,068 - CA264_02530 0.45 +1.7 592,069 + CA264_02530 0.45 +0.1 592,077 - CA264_02530 0.46 +0.7 592,077 - CA264_02530 0.46 -0.1 592,152 + CA264_02530 0.52 -0.1 592,152 + CA264_02530 0.52 -0.3 592,154 + CA264_02530 0.52 -0.3 592,155 - CA264_02530 0.53 +0.6 592,192 + CA264_02530 0.56 -0.8 592,192 + CA264_02530 0.56 -0.4 592,193 - CA264_02530 0.56 +0.1 592,196 + CA264_02530 0.56 -0.8 592,280 + CA264_02530 0.63 -0.3 592,383 + CA264_02530 0.72 -0.4
Or see this region's nucleotide sequence