Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_01385

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_01380 and CA264_01385 are separated by 96 nucleotidesCA264_01385 and CA264_01390 overlap by 1 nucleotides CA264_01380: CA264_01380 - ADP-L-glycero-D-mannoheptose-6-epimerase, at 329,926 to 330,891 _01380 CA264_01385: CA264_01385 - iron ABC transporter substrate-binding protein, at 330,988 to 331,869 _01385 CA264_01390: CA264_01390 - iron ABC transporter permease, at 331,869 to 332,876 _01390 Position (kb) 330 331 332Strain fitness (log2 ratio) -1 0 1 2 3at 330.883 kb on + strandat 330.886 kb on + strandat 330.999 kb on - strandat 331.070 kb on + strandat 331.182 kb on + strand, within CA264_01385at 331.182 kb on + strand, within CA264_01385at 331.183 kb on - strand, within CA264_01385at 331.187 kb on + strand, within CA264_01385at 331.195 kb on - strand, within CA264_01385at 331.261 kb on + strand, within CA264_01385at 331.261 kb on + strand, within CA264_01385at 331.262 kb on - strand, within CA264_01385at 331.314 kb on + strand, within CA264_01385at 331.314 kb on + strand, within CA264_01385at 331.364 kb on - strand, within CA264_01385at 331.375 kb on + strand, within CA264_01385at 331.555 kb on + strand, within CA264_01385at 331.555 kb on + strand, within CA264_01385at 331.555 kb on + strand, within CA264_01385at 331.555 kb on + strand, within CA264_01385at 331.556 kb on - strand, within CA264_01385at 331.582 kb on - strand, within CA264_01385at 331.587 kb on + strand, within CA264_01385at 331.588 kb on - strand, within CA264_01385at 331.663 kb on + strand, within CA264_01385at 331.664 kb on - strand, within CA264_01385at 331.670 kb on + strand, within CA264_01385at 331.766 kb on - strand, within CA264_01385at 331.766 kb on - strand, within CA264_01385at 331.783 kb on + strandat 331.784 kb on - strandat 331.796 kb on - strandat 331.803 kb on - strandat 331.884 kb on + strandat 331.891 kb on + strandat 331.891 kb on + strandat 331.969 kb on + strandat 332.048 kb on - strand, within CA264_01390at 332.048 kb on - strand, within CA264_01390at 332.107 kb on + strand, within CA264_01390at 332.108 kb on - strand, within CA264_01390at 332.112 kb on - strand, within CA264_01390at 332.112 kb on - strand, within CA264_01390at 332.131 kb on - strand, within CA264_01390at 332.333 kb on + strand, within CA264_01390at 332.353 kb on + strand, within CA264_01390at 332.353 kb on + strand, within CA264_01390at 332.354 kb on - strand, within CA264_01390at 332.354 kb on - strand, within CA264_01390at 332.354 kb on - strand, within CA264_01390at 332.527 kb on + strand, within CA264_01390at 332.527 kb on + strand, within CA264_01390at 332.528 kb on - strand, within CA264_01390at 332.528 kb on - strand, within CA264_01390at 332.660 kb on + strand, within CA264_01390at 332.741 kb on + strand, within CA264_01390at 332.807 kb on - strandat 332.836 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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330,883 + +0.2
330,886 + +0.4
330,999 - +0.5
331,070 + +1.4
331,182 + CA264_01385 0.22 +2.2
331,182 + CA264_01385 0.22 +1.8
331,183 - CA264_01385 0.22 +2.0
331,187 + CA264_01385 0.23 +1.8
331,195 - CA264_01385 0.23 +1.8
331,261 + CA264_01385 0.31 +1.6
331,261 + CA264_01385 0.31 +2.2
331,262 - CA264_01385 0.31 +1.5
331,314 + CA264_01385 0.37 +1.6
331,314 + CA264_01385 0.37 +1.2
331,364 - CA264_01385 0.43 +1.2
331,375 + CA264_01385 0.44 +2.0
331,555 + CA264_01385 0.64 +2.1
331,555 + CA264_01385 0.64 +2.0
331,555 + CA264_01385 0.64 +1.3
331,555 + CA264_01385 0.64 +1.7
331,556 - CA264_01385 0.64 +1.9
331,582 - CA264_01385 0.67 +1.4
331,587 + CA264_01385 0.68 +1.8
331,588 - CA264_01385 0.68 +2.1
331,663 + CA264_01385 0.77 +1.9
331,664 - CA264_01385 0.77 +1.6
331,670 + CA264_01385 0.77 +2.1
331,766 - CA264_01385 0.88 +2.2
331,766 - CA264_01385 0.88 +3.1
331,783 + +1.6
331,784 - +1.6
331,796 - +2.4
331,803 - +1.9
331,884 + +2.6
331,891 + +2.9
331,891 + +1.7
331,969 + +1.2
332,048 - CA264_01390 0.18 +2.2
332,048 - CA264_01390 0.18 +0.5
332,107 + CA264_01390 0.24 +2.3
332,108 - CA264_01390 0.24 +2.2
332,112 - CA264_01390 0.24 +2.2
332,112 - CA264_01390 0.24 +2.5
332,131 - CA264_01390 0.26 +1.5
332,333 + CA264_01390 0.46 +1.8
332,353 + CA264_01390 0.48 +3.5
332,353 + CA264_01390 0.48 +1.7
332,354 - CA264_01390 0.48 +2.1
332,354 - CA264_01390 0.48 +2.0
332,354 - CA264_01390 0.48 +2.5
332,527 + CA264_01390 0.65 +2.4
332,527 + CA264_01390 0.65 +1.8
332,528 - CA264_01390 0.65 +2.1
332,528 - CA264_01390 0.65 +2.3
332,660 + CA264_01390 0.78 +0.6
332,741 + CA264_01390 0.87 +2.0
332,807 - +2.0
332,836 + -0.8

Or see this region's nucleotide sequence