Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00630

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00625 and CA264_00630 are separated by 87 nucleotidesCA264_00630 and CA264_00635 are separated by 118 nucleotides CA264_00625: CA264_00625 - serine hydrolase, at 137,069 to 138,664 _00625 CA264_00630: CA264_00630 - cystathionine beta-lyase, at 138,752 to 139,882 _00630 CA264_00635: CA264_00635 - pyridoxal phosphate-dependent aminotransferase, at 140,001 to 141,092 _00635 Position (kb) 138 139 140Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 137.783 kb on + strand, within CA264_00625at 137.783 kb on + strand, within CA264_00625at 137.826 kb on + strand, within CA264_00625at 137.826 kb on + strand, within CA264_00625at 137.827 kb on - strand, within CA264_00625at 137.827 kb on - strand, within CA264_00625at 137.883 kb on + strand, within CA264_00625at 137.884 kb on - strand, within CA264_00625at 137.884 kb on - strand, within CA264_00625at 137.884 kb on - strand, within CA264_00625at 137.887 kb on + strand, within CA264_00625at 137.887 kb on + strand, within CA264_00625at 137.888 kb on - strand, within CA264_00625at 137.966 kb on + strand, within CA264_00625at 137.966 kb on + strand, within CA264_00625at 138.034 kb on + strand, within CA264_00625at 138.035 kb on - strand, within CA264_00625at 138.105 kb on + strand, within CA264_00625at 138.105 kb on + strand, within CA264_00625at 138.105 kb on + strand, within CA264_00625at 138.126 kb on + strand, within CA264_00625at 138.127 kb on - strand, within CA264_00625at 138.127 kb on - strand, within CA264_00625at 138.191 kb on - strand, within CA264_00625at 138.274 kb on + strand, within CA264_00625at 138.292 kb on - strand, within CA264_00625at 138.300 kb on + strand, within CA264_00625at 138.322 kb on - strand, within CA264_00625at 138.322 kb on - strand, within CA264_00625at 138.322 kb on - strand, within CA264_00625at 138.578 kb on - strandat 138.678 kb on + strandat 138.679 kb on - strandat 138.700 kb on + strandat 138.701 kb on - strandat 138.701 kb on - strandat 138.705 kb on + strandat 138.705 kb on + strandat 138.733 kb on + strandat 138.734 kb on - strandat 138.740 kb on + strandat 138.744 kb on + strandat 138.745 kb on - strandat 138.745 kb on - strandat 138.799 kb on - strandat 138.799 kb on - strandat 138.799 kb on - strandat 138.833 kb on + strandat 138.857 kb on + strandat 138.857 kb on + strandat 138.857 kb on + strandat 138.858 kb on - strandat 138.858 kb on - strandat 138.858 kb on - strandat 138.858 kb on - strandat 138.864 kb on - strandat 139.083 kb on + strand, within CA264_00630at 139.083 kb on + strand, within CA264_00630at 139.109 kb on + strand, within CA264_00630at 139.110 kb on - strand, within CA264_00630at 139.110 kb on - strand, within CA264_00630at 139.112 kb on - strand, within CA264_00630at 139.112 kb on - strand, within CA264_00630at 139.124 kb on + strand, within CA264_00630at 139.125 kb on - strand, within CA264_00630at 139.125 kb on - strand, within CA264_00630at 139.125 kb on - strand, within CA264_00630at 139.149 kb on + strand, within CA264_00630at 139.149 kb on + strand, within CA264_00630at 139.164 kb on + strand, within CA264_00630at 139.231 kb on + strand, within CA264_00630at 139.231 kb on + strand, within CA264_00630at 139.231 kb on + strand, within CA264_00630at 139.232 kb on - strand, within CA264_00630at 139.401 kb on + strand, within CA264_00630at 139.413 kb on - strand, within CA264_00630at 139.521 kb on - strand, within CA264_00630at 139.672 kb on + strand, within CA264_00630at 139.690 kb on + strand, within CA264_00630at 139.691 kb on - strand, within CA264_00630at 139.748 kb on - strand, within CA264_00630at 139.748 kb on - strand, within CA264_00630at 139.828 kb on - strandat 139.878 kb on + strandat 139.880 kb on + strandat 139.926 kb on - strandat 139.942 kb on + strandat 139.961 kb on + strandat 140.002 kb on + strandat 140.129 kb on - strand, within CA264_00635at 140.343 kb on + strand, within CA264_00635at 140.344 kb on - strand, within CA264_00635at 140.344 kb on - strand, within CA264_00635at 140.420 kb on + strand, within CA264_00635at 140.421 kb on - strand, within CA264_00635at 140.425 kb on + strand, within CA264_00635at 140.432 kb on - strand, within CA264_00635at 140.455 kb on + strand, within CA264_00635at 140.848 kb on + strand, within CA264_00635at 140.850 kb on + strand, within CA264_00635at 140.851 kb on - strand, within CA264_00635at 140.871 kb on + strand, within CA264_00635at 140.871 kb on + strand, within CA264_00635at 140.872 kb on - strand, within CA264_00635at 140.879 kb on + strand, within CA264_00635at 140.879 kb on + strand, within CA264_00635

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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137,783 + CA264_00625 0.45 -0.1
137,783 + CA264_00625 0.45 +0.7
137,826 + CA264_00625 0.47 -0.3
137,826 + CA264_00625 0.47 -0.8
137,827 - CA264_00625 0.47 +0.0
137,827 - CA264_00625 0.47 -0.6
137,883 + CA264_00625 0.51 -0.2
137,884 - CA264_00625 0.51 -0.7
137,884 - CA264_00625 0.51 +0.8
137,884 - CA264_00625 0.51 -0.9
137,887 + CA264_00625 0.51 +0.5
137,887 + CA264_00625 0.51 +0.8
137,888 - CA264_00625 0.51 +3.8
137,966 + CA264_00625 0.56 -0.7
137,966 + CA264_00625 0.56 -0.4
138,034 + CA264_00625 0.60 -0.4
138,035 - CA264_00625 0.61 -0.3
138,105 + CA264_00625 0.65 +0.7
138,105 + CA264_00625 0.65 -0.2
138,105 + CA264_00625 0.65 +1.0
138,126 + CA264_00625 0.66 +0.3
138,127 - CA264_00625 0.66 +0.6
138,127 - CA264_00625 0.66 -0.7
138,191 - CA264_00625 0.70 -0.3
138,274 + CA264_00625 0.76 +1.8
138,292 - CA264_00625 0.77 +0.1
138,300 + CA264_00625 0.77 -0.3
138,322 - CA264_00625 0.79 +0.7
138,322 - CA264_00625 0.79 +0.5
138,322 - CA264_00625 0.79 -0.4
138,578 - -0.7
138,678 + +0.9
138,679 - -0.2
138,700 + +0.4
138,701 - -0.3
138,701 - +0.2
138,705 + -0.3
138,705 + -0.4
138,733 + +0.0
138,734 - +0.8
138,740 + -0.1
138,744 + -0.5
138,745 - +1.6
138,745 - +0.2
138,799 - +0.2
138,799 - +0.0
138,799 - +0.2
138,833 + -0.1
138,857 + -0.1
138,857 + -1.6
138,857 + -0.1
138,858 - -1.4
138,858 - +2.0
138,858 - -0.3
138,858 - -0.1
138,864 - -0.6
139,083 + CA264_00630 0.29 -0.2
139,083 + CA264_00630 0.29 -1.3
139,109 + CA264_00630 0.32 -0.2
139,110 - CA264_00630 0.32 +0.3
139,110 - CA264_00630 0.32 +0.1
139,112 - CA264_00630 0.32 +0.1
139,112 - CA264_00630 0.32 -0.3
139,124 + CA264_00630 0.33 -0.0
139,125 - CA264_00630 0.33 +1.3
139,125 - CA264_00630 0.33 +0.5
139,125 - CA264_00630 0.33 -3.4
139,149 + CA264_00630 0.35 +0.7
139,149 + CA264_00630 0.35 -0.9
139,164 + CA264_00630 0.36 +1.1
139,231 + CA264_00630 0.42 -0.8
139,231 + CA264_00630 0.42 +0.5
139,231 + CA264_00630 0.42 -0.3
139,232 - CA264_00630 0.42 -0.6
139,401 + CA264_00630 0.57 +1.0
139,413 - CA264_00630 0.58 +0.2
139,521 - CA264_00630 0.68 +0.7
139,672 + CA264_00630 0.81 -0.3
139,690 + CA264_00630 0.83 +0.1
139,691 - CA264_00630 0.83 -1.4
139,748 - CA264_00630 0.88 -0.7
139,748 - CA264_00630 0.88 +1.2
139,828 - +0.2
139,878 + -0.3
139,880 + -0.3
139,926 - +0.6
139,942 + -0.0
139,961 + -0.0
140,002 + -1.9
140,129 - CA264_00635 0.12 +0.1
140,343 + CA264_00635 0.31 -0.5
140,344 - CA264_00635 0.31 -0.8
140,344 - CA264_00635 0.31 -0.0
140,420 + CA264_00635 0.38 -0.3
140,421 - CA264_00635 0.38 -1.1
140,425 + CA264_00635 0.39 +0.5
140,432 - CA264_00635 0.39 -0.3
140,455 + CA264_00635 0.42 -1.5
140,848 + CA264_00635 0.78 -0.3
140,850 + CA264_00635 0.78 -0.4
140,851 - CA264_00635 0.78 -0.0
140,871 + CA264_00635 0.80 +0.5
140,871 + CA264_00635 0.80 -1.5
140,872 - CA264_00635 0.80 -0.6
140,879 + CA264_00635 0.80 -0.2
140,879 + CA264_00635 0.80 -0.0

Or see this region's nucleotide sequence