Experiment: D-Glucuronic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08005 and ABID97_RS08010 are separated by 106 nucleotides ABID97_RS08010 and ABID97_RS08015 are separated by 134 nucleotides
ABID97_RS08005: ABID97_RS08005 - MFS family transporter, at 1,682,353 to 1,683,693
_RS08005
ABID97_RS08010: ABID97_RS08010 - alpha-hydroxy acid oxidase, at 1,683,800 to 1,684,957
_RS08010
ABID97_RS08015: ABID97_RS08015 - LysR substrate-binding domain-containing protein, at 1,685,092 to 1,685,976
_RS08015
Position (kb) 1683
1684
1685 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1682.810 kb on + strand, within ABID97_RS08005 at 1682.810 kb on + strand, within ABID97_RS08005 at 1682.810 kb on + strand, within ABID97_RS08005 at 1682.852 kb on + strand, within ABID97_RS08005 at 1682.853 kb on - strand, within ABID97_RS08005 at 1682.864 kb on + strand, within ABID97_RS08005 at 1682.864 kb on + strand, within ABID97_RS08005 at 1682.864 kb on + strand, within ABID97_RS08005 at 1682.864 kb on + strand, within ABID97_RS08005 at 1682.864 kb on + strand, within ABID97_RS08005 at 1682.864 kb on + strand, within ABID97_RS08005 at 1682.865 kb on - strand, within ABID97_RS08005 at 1682.865 kb on - strand, within ABID97_RS08005 at 1682.880 kb on - strand, within ABID97_RS08005 at 1683.165 kb on - strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.218 kb on + strand, within ABID97_RS08005 at 1683.219 kb on - strand, within ABID97_RS08005 at 1683.219 kb on - strand, within ABID97_RS08005 at 1683.219 kb on - strand, within ABID97_RS08005 at 1683.315 kb on - strand, within ABID97_RS08005 at 1683.315 kb on - strand, within ABID97_RS08005 at 1683.481 kb on + strand, within ABID97_RS08005 at 1683.539 kb on + strand, within ABID97_RS08005 at 1683.539 kb on + strand, within ABID97_RS08005 at 1683.539 kb on + strand, within ABID97_RS08005 at 1683.539 kb on + strand, within ABID97_RS08005 at 1683.545 kb on + strand, within ABID97_RS08005 at 1683.546 kb on - strand, within ABID97_RS08005 at 1683.546 kb on - strand, within ABID97_RS08005 at 1683.546 kb on - strand, within ABID97_RS08005 at 1683.626 kb on + strand at 1683.627 kb on - strand at 1683.627 kb on - strand at 1683.801 kb on + strand at 1683.802 kb on - strand at 1683.928 kb on - strand, within ABID97_RS08010 at 1683.942 kb on + strand, within ABID97_RS08010 at 1684.557 kb on + strand, within ABID97_RS08010 at 1684.558 kb on - strand, within ABID97_RS08010 at 1684.558 kb on - strand, within ABID97_RS08010 at 1684.876 kb on - strand at 1684.882 kb on - strand at 1684.882 kb on - strand at 1685.177 kb on + strand at 1685.465 kb on + strand, within ABID97_RS08015 at 1685.466 kb on - strand, within ABID97_RS08015 at 1685.466 kb on - strand, within ABID97_RS08015
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucuronic Acid (C) remove 1,682,810 + ABID97_RS08005 0.34 -0.2 1,682,810 + ABID97_RS08005 0.34 -0.7 1,682,810 + ABID97_RS08005 0.34 +0.2 1,682,852 + ABID97_RS08005 0.37 +0.0 1,682,853 - ABID97_RS08005 0.37 +0.1 1,682,864 + ABID97_RS08005 0.38 -0.1 1,682,864 + ABID97_RS08005 0.38 -0.9 1,682,864 + ABID97_RS08005 0.38 -0.4 1,682,864 + ABID97_RS08005 0.38 -0.3 1,682,864 + ABID97_RS08005 0.38 -0.3 1,682,864 + ABID97_RS08005 0.38 -0.1 1,682,865 - ABID97_RS08005 0.38 -0.5 1,682,865 - ABID97_RS08005 0.38 +2.2 1,682,880 - ABID97_RS08005 0.39 -0.1 1,683,165 - ABID97_RS08005 0.61 +1.1 1,683,218 + ABID97_RS08005 0.65 -0.4 1,683,218 + ABID97_RS08005 0.65 -0.4 1,683,218 + ABID97_RS08005 0.65 +0.3 1,683,218 + ABID97_RS08005 0.65 +0.8 1,683,218 + ABID97_RS08005 0.65 +1.6 1,683,218 + ABID97_RS08005 0.65 -0.0 1,683,218 + ABID97_RS08005 0.65 +1.1 1,683,219 - ABID97_RS08005 0.65 +0.4 1,683,219 - ABID97_RS08005 0.65 +1.6 1,683,219 - ABID97_RS08005 0.65 +0.1 1,683,315 - ABID97_RS08005 0.72 +1.6 1,683,315 - ABID97_RS08005 0.72 +0.1 1,683,481 + ABID97_RS08005 0.84 -0.3 1,683,539 + ABID97_RS08005 0.88 -0.3 1,683,539 + ABID97_RS08005 0.88 +0.1 1,683,539 + ABID97_RS08005 0.88 -0.4 1,683,539 + ABID97_RS08005 0.88 +0.2 1,683,545 + ABID97_RS08005 0.89 +0.2 1,683,546 - ABID97_RS08005 0.89 +0.1 1,683,546 - ABID97_RS08005 0.89 -0.1 1,683,546 - ABID97_RS08005 0.89 +0.6 1,683,626 + +0.3 1,683,627 - -0.7 1,683,627 - +2.0 1,683,801 + +0.2 1,683,802 - +0.2 1,683,928 - ABID97_RS08010 0.11 -2.0 1,683,942 + ABID97_RS08010 0.12 -1.4 1,684,557 + ABID97_RS08010 0.65 -1.9 1,684,558 - ABID97_RS08010 0.65 -2.4 1,684,558 - ABID97_RS08010 0.65 -1.8 1,684,876 - -0.3 1,684,882 - -2.0 1,684,882 - -0.0 1,685,177 + +1.9 1,685,465 + ABID97_RS08015 0.42 +0.4 1,685,466 - ABID97_RS08015 0.42 -1.3 1,685,466 - ABID97_RS08015 0.42 -0.4
Or see this region's nucleotide sequence