Experiment: D-Glucuronic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06770 and ABID97_RS06775 overlap by 4 nucleotides ABID97_RS06775 and ABID97_RS06780 are separated by 22 nucleotides ABID97_RS06780 and ABID97_RS06785 are separated by 291 nucleotides ABID97_RS06785 and ABID97_RS06790 overlap by 1 nucleotides
ABID97_RS06770: ABID97_RS06770 - CapA family protein, at 1,427,159 to 1,430,422
_RS06770
ABID97_RS06775: ABID97_RS06775 - hypothetical protein, at 1,430,419 to 1,431,372
_RS06775
ABID97_RS06780: ABID97_RS06780 - aldose epimerase family protein, at 1,431,395 to 1,432,483
_RS06780
ABID97_RS06785: ABID97_RS06785 - hypothetical protein, at 1,432,775 to 1,432,900
_RS06785
ABID97_RS06790: ABID97_RS06790 - DUF4123 domain-containing protein, at 1,432,900 to 1,433,868
_RS06790
Position (kb) 1431
1432
1433 Strain fitness (log2 ratio) -1
0
1 at 1430.656 kb on + strand, within ABID97_RS06775 at 1430.845 kb on + strand, within ABID97_RS06775 at 1430.845 kb on + strand, within ABID97_RS06775 at 1430.846 kb on - strand, within ABID97_RS06775 at 1431.046 kb on + strand, within ABID97_RS06775 at 1431.124 kb on + strand, within ABID97_RS06775 at 1431.371 kb on - strand at 1431.371 kb on - strand at 1431.479 kb on + strand at 1431.479 kb on + strand at 1431.480 kb on - strand at 1431.830 kb on + strand, within ABID97_RS06780 at 1431.830 kb on + strand, within ABID97_RS06780 at 1431.857 kb on + strand, within ABID97_RS06780 at 1431.887 kb on + strand, within ABID97_RS06780 at 1431.887 kb on + strand, within ABID97_RS06780 at 1431.977 kb on + strand, within ABID97_RS06780 at 1431.977 kb on + strand, within ABID97_RS06780 at 1431.977 kb on + strand, within ABID97_RS06780 at 1431.978 kb on - strand, within ABID97_RS06780 at 1432.040 kb on + strand, within ABID97_RS06780 at 1432.296 kb on - strand, within ABID97_RS06780 at 1432.296 kb on - strand, within ABID97_RS06780 at 1432.296 kb on - strand, within ABID97_RS06780 at 1432.386 kb on - strand at 1432.584 kb on - strand at 1432.912 kb on + strand at 1432.913 kb on - strand at 1432.913 kb on - strand at 1432.916 kb on + strand at 1432.916 kb on + strand at 1432.917 kb on - strand at 1432.917 kb on - strand at 1433.001 kb on + strand, within ABID97_RS06790 at 1433.002 kb on - strand, within ABID97_RS06790 at 1433.005 kb on + strand, within ABID97_RS06790 at 1433.005 kb on + strand, within ABID97_RS06790 at 1433.005 kb on + strand, within ABID97_RS06790 at 1433.005 kb on + strand, within ABID97_RS06790 at 1433.005 kb on + strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.006 kb on - strand, within ABID97_RS06790 at 1433.111 kb on - strand, within ABID97_RS06790 at 1433.244 kb on - strand, within ABID97_RS06790
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucuronic Acid (C) remove 1,430,656 + ABID97_RS06775 0.25 -0.7 1,430,845 + ABID97_RS06775 0.45 -0.1 1,430,845 + ABID97_RS06775 0.45 +0.6 1,430,846 - ABID97_RS06775 0.45 -0.0 1,431,046 + ABID97_RS06775 0.66 -0.2 1,431,124 + ABID97_RS06775 0.74 +0.4 1,431,371 - +0.6 1,431,371 - +0.1 1,431,479 + +1.1 1,431,479 + +0.9 1,431,480 - +0.1 1,431,830 + ABID97_RS06780 0.40 -0.4 1,431,830 + ABID97_RS06780 0.40 -0.0 1,431,857 + ABID97_RS06780 0.42 -0.2 1,431,887 + ABID97_RS06780 0.45 -0.6 1,431,887 + ABID97_RS06780 0.45 -0.4 1,431,977 + ABID97_RS06780 0.53 -0.1 1,431,977 + ABID97_RS06780 0.53 +0.1 1,431,977 + ABID97_RS06780 0.53 +0.7 1,431,978 - ABID97_RS06780 0.54 -0.9 1,432,040 + ABID97_RS06780 0.59 +0.1 1,432,296 - ABID97_RS06780 0.83 +0.1 1,432,296 - ABID97_RS06780 0.83 +0.2 1,432,296 - ABID97_RS06780 0.83 +0.8 1,432,386 - -0.8 1,432,584 - -0.1 1,432,912 + -0.1 1,432,913 - -0.1 1,432,913 - +0.8 1,432,916 + -0.3 1,432,916 + +0.5 1,432,917 - -0.3 1,432,917 - +0.2 1,433,001 + ABID97_RS06790 0.10 +0.0 1,433,002 - ABID97_RS06790 0.11 +0.2 1,433,005 + ABID97_RS06790 0.11 -1.7 1,433,005 + ABID97_RS06790 0.11 +0.1 1,433,005 + ABID97_RS06790 0.11 -0.7 1,433,005 + ABID97_RS06790 0.11 +0.3 1,433,005 + ABID97_RS06790 0.11 -0.4 1,433,006 - ABID97_RS06790 0.11 -0.3 1,433,006 - ABID97_RS06790 0.11 -0.4 1,433,006 - ABID97_RS06790 0.11 -0.2 1,433,006 - ABID97_RS06790 0.11 +0.1 1,433,006 - ABID97_RS06790 0.11 +0.1 1,433,006 - ABID97_RS06790 0.11 -0.4 1,433,006 - ABID97_RS06790 0.11 -0.2 1,433,111 - ABID97_RS06790 0.22 +0.3 1,433,244 - ABID97_RS06790 0.36 -0.2
Or see this region's nucleotide sequence