Experiment: D-Glucuronic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04660 and ABID97_RS04665 are separated by 48 nucleotides ABID97_RS04665 and ABID97_RS04670 are separated by 4 nucleotides ABID97_RS04670 and ABID97_RS04675 overlap by 1 nucleotides
ABID97_RS04660: ABID97_RS04660 - 6-phosphofructokinase, at 971,542 to 972,798
_RS04660
ABID97_RS04665: ABID97_RS04665 - acyl-CoA dehydrogenase family protein, at 972,847 to 974,010
_RS04665
ABID97_RS04670: ABID97_RS04670 - enoyl-CoA hydratase-related protein, at 974,015 to 974,818
_RS04670
ABID97_RS04675: ABID97_RS04675 - acetyl-CoA C-acetyltransferase, at 974,818 to 975,996
_RS04675
Position (kb) 972
973
974
975 Strain fitness (log2 ratio) -2
-1
0
1 at 972.053 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.383 kb on - strand, within ABID97_RS04660 at 972.479 kb on + strand, within ABID97_RS04660 at 972.480 kb on - strand, within ABID97_RS04660 at 972.521 kb on + strand, within ABID97_RS04660 at 972.558 kb on - strand, within ABID97_RS04660 at 972.681 kb on - strand at 972.681 kb on - strand at 972.681 kb on - strand at 972.776 kb on + strand at 972.776 kb on + strand at 972.777 kb on - strand at 972.777 kb on - strand at 972.912 kb on - strand at 972.912 kb on - strand at 972.912 kb on - strand at 972.939 kb on - strand at 973.035 kb on - strand, within ABID97_RS04665 at 973.148 kb on + strand, within ABID97_RS04665 at 973.164 kb on - strand, within ABID97_RS04665 at 973.205 kb on + strand, within ABID97_RS04665 at 973.563 kb on - strand, within ABID97_RS04665 at 973.679 kb on + strand, within ABID97_RS04665 at 973.718 kb on + strand, within ABID97_RS04665 at 974.116 kb on - strand, within ABID97_RS04670 at 974.410 kb on - strand, within ABID97_RS04670 at 974.415 kb on + strand, within ABID97_RS04670 at 974.416 kb on - strand, within ABID97_RS04670 at 974.882 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucuronic Acid (C) remove 972,053 + ABID97_RS04660 0.41 +0.4 972,314 + ABID97_RS04660 0.61 +0.6 972,314 + ABID97_RS04660 0.61 +0.0 972,314 + ABID97_RS04660 0.61 +0.3 972,314 + ABID97_RS04660 0.61 +0.0 972,383 - ABID97_RS04660 0.67 +0.8 972,479 + ABID97_RS04660 0.75 -0.1 972,480 - ABID97_RS04660 0.75 -0.6 972,521 + ABID97_RS04660 0.78 +0.1 972,558 - ABID97_RS04660 0.81 +0.0 972,681 - +0.5 972,681 - -0.4 972,681 - -1.2 972,776 + +0.1 972,776 + +0.6 972,777 - +1.6 972,777 - -0.3 972,912 - -0.5 972,912 - +0.5 972,912 - -0.5 972,939 - +0.3 973,035 - ABID97_RS04665 0.16 -2.1 973,148 + ABID97_RS04665 0.26 -0.7 973,164 - ABID97_RS04665 0.27 -0.1 973,205 + ABID97_RS04665 0.31 -1.0 973,563 - ABID97_RS04665 0.62 +0.1 973,679 + ABID97_RS04665 0.71 -0.5 973,718 + ABID97_RS04665 0.75 -0.4 974,116 - ABID97_RS04670 0.13 +1.0 974,410 - ABID97_RS04670 0.49 +0.2 974,415 + ABID97_RS04670 0.50 +0.4 974,416 - ABID97_RS04670 0.50 -0.8 974,882 + -0.6
Or see this region's nucleotide sequence