Strain Fitness in Escherichia coli BW25113 around b2905

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
3,046,636	+	gcvP	b2903	0.85	-0.1
3,046,636	+	gcvP	b2903	0.85	-0.3
3,046,653	-	gcvP	b2903	0.86	-0.4
3,046,659	-	gcvP	b2903	0.86	+1.6
3,046,685	-	gcvP	b2903	0.87	-1.3
3,046,693	+	gcvP	b2903	0.87	+0.6
3,046,693	+	gcvP	b2903	0.87	-0.5
3,046,693	-	gcvP	b2903	0.87	+0.0
3,046,696	-	gcvP	b2903	0.87	+0.0
3,046,706	-	gcvP	b2903	0.88	-2.0
3,046,724	+	gcvP	b2903	0.88	-0.1
3,046,724	+	gcvP	b2903	0.88	-0.0
3,046,733	+	gcvP	b2903	0.88	-0.5
3,046,803	-				-1.0
3,046,848	+				-0.0
3,046,854	-				+2.0
3,046,877	-				-0.1
3,047,124	-				+0.0
3,047,124	-				+0.0
3,047,214	-				+0.2
3,047,214	-				+0.0
3,047,321	+	gcvH	b2904	0.36	-0.8
3,047,321	+	gcvH	b2904	0.36	-0.2
3,047,468	+	gcvH	b2904	0.73	+1.2
3,047,542	+				-0.8
3,047,542	+				-1.2
3,047,684	+				-0.7
3,047,765	+	gcvT	b2905	0.16	-1.5
3,047,796	+	gcvT	b2905	0.18	+0.5
3,047,865	-	gcvT	b2905	0.25	-0.3
3,047,865	-	gcvT	b2905	0.25	+1.5
3,047,871	-	gcvT	b2905	0.25	+0.1
3,047,871	-	gcvT	b2905	0.25	-0.3
3,048,013	+	gcvT	b2905	0.38	+0.4
3,048,057	-	gcvT	b2905	0.42	-1.0
3,048,128	-	gcvT	b2905	0.49	+0.2
3,048,181	-	gcvT	b2905	0.54	-0.7
3,048,181	-	gcvT	b2905	0.54	+0.1
3,048,196	-	gcvT	b2905	0.55	+0.8
3,048,196	-	gcvT	b2905	0.55	+0.5
3,048,231	-	gcvT	b2905	0.58	+1.3
3,048,231	-	gcvT	b2905	0.58	-0.2
3,048,264	-	gcvT	b2905	0.61	+0.2
3,048,306	+	gcvT	b2905	0.65	-0.2
3,048,324	-	gcvT	b2905	0.67	-1.4
3,048,339	+	gcvT	b2905	0.68	-0.8
3,048,339	+	gcvT	b2905	0.68	+0.3
3,048,399	+	gcvT	b2905	0.73	+0.2
3,048,569	+	gcvT	b2905	0.89	-0.0
3,048,569	+	gcvT	b2905	0.89	+0.4
3,048,608	-				+0.5
3,048,624	-				-0.5
3,048,683	+				+0.0
3,048,683	+				+1.3
3,048,756	+				+0.3
3,048,756	+				-0.4
3,048,859	-				-1.4
3,048,859	-				-0.0
3,048,928	-				+1.0
3,049,195	-				+1.1
3,049,205	-				+0.6
3,049,205	-				+0.6
3,049,208	-				+0.5
3,049,208	-				+1.0
3,049,213	-				-0.8
3,049,310	-	visC	b2906	0.14	+0.5
3,049,310	-	visC	b2906	0.14	-0.1
3,049,315	-	visC	b2906	0.15	+1.5
3,049,365	+	visC	b2906	0.19	-0.1
3,049,406	+	visC	b2906	0.22	+0.4
3,049,458	+	visC	b2906	0.27	+1.9
3,049,474	-	visC	b2906	0.28	+1.3
3,049,536	+	visC	b2906	0.33	+1.1
3,049,544	-	visC	b2906	0.34	+1.2
3,049,544	-	visC	b2906	0.34	+0.9
3,049,546	-	visC	b2906	0.34	-0.4
3,049,546	-	visC	b2906	0.34	+0.7
3,049,546	-	visC	b2906	0.34	+2.0
3,049,549	+	visC	b2906	0.34	+0.3
3,049,563	-	visC	b2906	0.35	+0.8
3,049,632	+	visC	b2906	0.41	+1.4