Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24950 and IAI46_24955 are separated by 309 nucleotides IAI46_24955 and IAI46_24960 are separated by 8 nucleotides
IAI46_24950: IAI46_24950 - glutamate--ammonia ligase, at 5,324,455 to 5,325,864
_24950
IAI46_24955: IAI46_24955 - nitrogen regulation protein NR(II), at 5,326,174 to 5,327,223
_24955
IAI46_24960: IAI46_24960 - nitrogen regulation protein NR(I), at 5,327,232 to 5,328,644
_24960
Position (kb)
5326
5327
5328 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5325.175 kb on + strand, within IAI46_24950 at 5325.900 kb on + strand at 5325.900 kb on + strand at 5325.901 kb on - strand at 5325.901 kb on - strand at 5325.981 kb on + strand at 5326.000 kb on - strand at 5326.016 kb on + strand at 5326.026 kb on - strand at 5326.046 kb on + strand at 5326.047 kb on - strand at 5326.074 kb on - strand at 5326.130 kb on - strand at 5326.130 kb on - strand at 5326.130 kb on - strand at 5326.162 kb on + strand at 5326.162 kb on + strand at 5326.163 kb on - strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.346 kb on - strand, within IAI46_24955 at 5326.443 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.483 kb on - strand, within IAI46_24955 at 5326.844 kb on - strand, within IAI46_24955 at 5326.895 kb on + strand, within IAI46_24955 at 5326.895 kb on + strand, within IAI46_24955 at 5326.896 kb on - strand, within IAI46_24955 at 5326.896 kb on - strand, within IAI46_24955 at 5326.896 kb on - strand, within IAI46_24955 at 5326.968 kb on + strand, within IAI46_24955 at 5327.019 kb on + strand, within IAI46_24955 at 5327.019 kb on + strand, within IAI46_24955 at 5327.020 kb on - strand, within IAI46_24955 at 5327.020 kb on - strand, within IAI46_24955 at 5327.027 kb on + strand, within IAI46_24955 at 5327.028 kb on - strand, within IAI46_24955 at 5327.028 kb on - strand, within IAI46_24955 at 5327.072 kb on + strand, within IAI46_24955 at 5327.139 kb on + strand at 5327.139 kb on + strand at 5327.212 kb on - strand at 5327.212 kb on - strand at 5327.245 kb on + strand at 5327.246 kb on - strand at 5327.267 kb on + strand at 5327.268 kb on - strand at 5327.470 kb on + strand, within IAI46_24960 at 5327.532 kb on + strand, within IAI46_24960 at 5327.575 kb on + strand, within IAI46_24960 at 5327.726 kb on - strand, within IAI46_24960 at 5327.823 kb on - strand, within IAI46_24960 at 5328.055 kb on + strand, within IAI46_24960 at 5328.056 kb on - strand, within IAI46_24960 at 5328.056 kb on - strand, within IAI46_24960 at 5328.186 kb on - strand, within IAI46_24960 at 5328.204 kb on + strand, within IAI46_24960 at 5328.204 kb on + strand, within IAI46_24960 at 5328.204 kb on + strand, within IAI46_24960
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 5,325,175 + IAI46_24950 0.51 -1.3 5,325,900 + +0.5 5,325,900 + +1.6 5,325,901 - +0.0 5,325,901 - +0.5 5,325,981 + +0.6 5,326,000 - -1.8 5,326,016 + +2.2 5,326,026 - -0.5 5,326,046 + -0.0 5,326,047 - -0.1 5,326,074 - +0.3 5,326,130 - +0.2 5,326,130 - -0.1 5,326,130 - -0.1 5,326,162 + +0.1 5,326,162 + +0.1 5,326,163 - -1.3 5,326,171 + -1.6 5,326,171 + -0.4 5,326,171 + -0.3 5,326,171 + -1.6 5,326,171 + -0.1 5,326,171 + -0.3 5,326,171 + -1.3 5,326,171 + +0.2 5,326,171 + +0.4 5,326,171 + +1.1 5,326,172 - -2.1 5,326,172 - -0.7 5,326,172 - +0.1 5,326,172 - -0.1 5,326,172 - -0.1 5,326,172 - -2.0 5,326,172 - -0.4 5,326,173 + -0.8 5,326,173 + +0.4 5,326,173 + +1.5 5,326,173 + -0.4 5,326,173 + -0.7 5,326,173 + -2.6 5,326,173 + -1.3 5,326,173 + -0.2 5,326,173 + -0.1 5,326,173 + -0.5 5,326,173 + -1.3 5,326,173 + -1.1 5,326,174 - -2.1 5,326,174 - -1.5 5,326,174 - -0.1 5,326,174 - -0.9 5,326,174 - -0.5 5,326,174 - -0.1 5,326,174 - -1.2 5,326,346 - IAI46_24955 0.16 +0.1 5,326,443 + IAI46_24955 0.26 +2.0 5,326,480 + IAI46_24955 0.29 -0.6 5,326,480 + IAI46_24955 0.29 -0.1 5,326,480 + IAI46_24955 0.29 +0.5 5,326,480 + IAI46_24955 0.29 -1.0 5,326,481 - IAI46_24955 0.29 -0.3 5,326,481 - IAI46_24955 0.29 -1.3 5,326,481 - IAI46_24955 0.29 +0.4 5,326,481 - IAI46_24955 0.29 -1.8 5,326,481 - IAI46_24955 0.29 +0.1 5,326,481 - IAI46_24955 0.29 -1.1 5,326,481 - IAI46_24955 0.29 +0.7 5,326,481 - IAI46_24955 0.29 -2.3 5,326,483 - IAI46_24955 0.29 -0.1 5,326,844 - IAI46_24955 0.64 -0.6 5,326,895 + IAI46_24955 0.69 -1.9 5,326,895 + IAI46_24955 0.69 -1.3 5,326,896 - IAI46_24955 0.69 -0.5 5,326,896 - IAI46_24955 0.69 -0.3 5,326,896 - IAI46_24955 0.69 -0.4 5,326,968 + IAI46_24955 0.76 +0.1 5,327,019 + IAI46_24955 0.80 -0.4 5,327,019 + IAI46_24955 0.80 -1.4 5,327,020 - IAI46_24955 0.81 -1.4 5,327,020 - IAI46_24955 0.81 +0.7 5,327,027 + IAI46_24955 0.81 +0.1 5,327,028 - IAI46_24955 0.81 -0.6 5,327,028 - IAI46_24955 0.81 -1.6 5,327,072 + IAI46_24955 0.86 -1.0 5,327,139 + -0.3 5,327,139 + -0.3 5,327,212 - -0.9 5,327,212 - -0.0 5,327,245 + -0.5 5,327,246 - -0.3 5,327,267 + -1.5 5,327,268 - +0.4 5,327,470 + IAI46_24960 0.17 +0.9 5,327,532 + IAI46_24960 0.21 -2.1 5,327,575 + IAI46_24960 0.24 -1.1 5,327,726 - IAI46_24960 0.35 -0.1 5,327,823 - IAI46_24960 0.42 -0.2 5,328,055 + IAI46_24960 0.58 -1.3 5,328,056 - IAI46_24960 0.58 -0.3 5,328,056 - IAI46_24960 0.58 +0.7 5,328,186 - IAI46_24960 0.68 -0.8 5,328,204 + IAI46_24960 0.69 -0.8 5,328,204 + IAI46_24960 0.69 -1.5 5,328,204 + IAI46_24960 0.69 -1.7
Or see this region's nucleotide sequence