Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23940 and IAI46_23945 are separated by 496 nucleotides IAI46_23945 and IAI46_23950 are separated by 213 nucleotides IAI46_23950 and IAI46_23955 are separated by 48 nucleotides
IAI46_23940: IAI46_23940 - 1,4-alpha-glucan branching protein GlgB, at 5,096,002 to 5,098,188
_23940
IAI46_23945: IAI46_23945 - aspartate-semialdehyde dehydrogenase, at 5,098,685 to 5,099,788
_23945
IAI46_23950: IAI46_23950 - YhgN family NAAT transporter, at 5,100,002 to 5,100,595
_23950
IAI46_23955: IAI46_23955 - gluconokinase, at 5,100,644 to 5,101,171
_23955
Position (kb)
5098
5099
5100 Strain fitness (log2 ratio)
-1
0
1
2
3 at 5097.824 kb on + strand, within IAI46_23940 at 5097.825 kb on - strand, within IAI46_23940 at 5097.825 kb on - strand, within IAI46_23940 at 5098.181 kb on - strand at 5098.181 kb on - strand at 5098.181 kb on - strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.188 kb on + strand at 5098.189 kb on - strand at 5098.189 kb on - strand at 5098.189 kb on - strand at 5098.189 kb on - strand at 5098.189 kb on - strand at 5098.189 kb on - strand at 5098.206 kb on + strand at 5098.219 kb on + strand at 5098.220 kb on - strand at 5098.220 kb on - strand at 5098.222 kb on - strand at 5098.270 kb on + strand at 5098.271 kb on - strand at 5098.299 kb on - strand at 5098.299 kb on - strand at 5098.341 kb on + strand at 5098.342 kb on - strand at 5098.352 kb on + strand at 5098.352 kb on + strand at 5098.353 kb on - strand at 5098.362 kb on + strand at 5098.403 kb on + strand at 5098.403 kb on + strand at 5098.403 kb on + strand at 5098.404 kb on - strand at 5098.404 kb on - strand at 5098.447 kb on + strand at 5098.447 kb on + strand at 5098.448 kb on - strand at 5098.448 kb on - strand at 5098.448 kb on - strand at 5098.453 kb on + strand at 5098.453 kb on + strand at 5098.453 kb on + strand at 5098.453 kb on + strand at 5098.454 kb on - strand at 5098.454 kb on - strand at 5098.454 kb on - strand at 5098.457 kb on + strand at 5098.457 kb on + strand at 5098.457 kb on + strand at 5098.457 kb on + strand at 5098.457 kb on + strand at 5098.457 kb on + strand at 5098.457 kb on + strand at 5098.458 kb on - strand at 5098.458 kb on - strand at 5098.458 kb on - strand at 5098.458 kb on - strand at 5098.458 kb on - strand at 5098.485 kb on - strand at 5098.503 kb on + strand at 5098.504 kb on - strand at 5098.504 kb on - strand at 5098.595 kb on + strand at 5098.596 kb on - strand at 5098.675 kb on - strand at 5098.675 kb on - strand at 5099.821 kb on - strand at 5099.821 kb on - strand at 5099.821 kb on - strand at 5099.835 kb on - strand at 5099.880 kb on - strand at 5099.914 kb on + strand at 5099.914 kb on + strand at 5099.914 kb on + strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.918 kb on + strand at 5099.918 kb on + strand at 5099.918 kb on + strand at 5099.918 kb on + strand at 5099.953 kb on - strand at 5099.997 kb on + strand at 5099.997 kb on + strand at 5099.997 kb on + strand at 5099.998 kb on - strand at 5099.998 kb on - strand at 5099.998 kb on - strand at 5099.998 kb on - strand at 5100.039 kb on + strand at 5100.081 kb on + strand, within IAI46_23950 at 5100.081 kb on + strand, within IAI46_23950 at 5100.160 kb on - strand, within IAI46_23950 at 5100.236 kb on - strand, within IAI46_23950 at 5100.581 kb on + strand at 5100.581 kb on + strand at 5100.581 kb on + strand at 5100.582 kb on - strand at 5100.594 kb on - strand at 5100.594 kb on - strand at 5100.594 kb on - strand at 5100.600 kb on + strand at 5100.646 kb on - strand at 5100.667 kb on + strand at 5100.667 kb on + strand at 5100.669 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 5,097,824 + IAI46_23940 0.83 -0.3 5,097,825 - IAI46_23940 0.83 -0.5 5,097,825 - IAI46_23940 0.83 -0.1 5,098,181 - +1.6 5,098,181 - -0.3 5,098,181 - +0.9 5,098,188 + +0.7 5,098,188 + +0.4 5,098,188 + +1.0 5,098,188 + +1.3 5,098,188 + -0.7 5,098,188 + -0.9 5,098,188 + +0.5 5,098,188 + +0.1 5,098,189 - -0.7 5,098,189 - -0.1 5,098,189 - +0.8 5,098,189 - +0.8 5,098,189 - +1.3 5,098,189 - -1.4 5,098,206 + +0.2 5,098,219 + +0.2 5,098,220 - +2.2 5,098,220 - +0.9 5,098,222 - +0.1 5,098,270 + +1.3 5,098,271 - +0.3 5,098,299 - +0.5 5,098,299 - -0.0 5,098,341 + -0.5 5,098,342 - -0.0 5,098,352 + -0.6 5,098,352 + +0.1 5,098,353 - -0.4 5,098,362 + -0.4 5,098,403 + +0.1 5,098,403 + +0.0 5,098,403 + +0.1 5,098,404 - +0.2 5,098,404 - -0.5 5,098,447 + -0.2 5,098,447 + +1.0 5,098,448 - +0.0 5,098,448 - +0.0 5,098,448 - +0.0 5,098,453 + +0.8 5,098,453 + +0.2 5,098,453 + -0.4 5,098,453 + -0.2 5,098,454 - -0.2 5,098,454 - +0.5 5,098,454 - -0.5 5,098,457 + -0.5 5,098,457 + +0.3 5,098,457 + -1.0 5,098,457 + +1.0 5,098,457 + -1.7 5,098,457 + +0.9 5,098,457 + +0.7 5,098,458 - +0.3 5,098,458 - +0.5 5,098,458 - -0.5 5,098,458 - +0.3 5,098,458 - -0.2 5,098,485 - -0.3 5,098,503 + +0.2 5,098,504 - +0.4 5,098,504 - -0.2 5,098,595 + +1.5 5,098,596 - -0.2 5,098,675 - -0.8 5,098,675 - +2.0 5,099,821 - +0.4 5,099,821 - -0.3 5,099,821 - -0.1 5,099,835 - +0.7 5,099,880 - -0.4 5,099,914 + +0.3 5,099,914 + -0.0 5,099,914 + -0.8 5,099,915 - -0.4 5,099,915 - +0.7 5,099,915 - +0.6 5,099,915 - +0.6 5,099,915 - +0.5 5,099,915 - -1.2 5,099,916 + +0.6 5,099,916 + +0.9 5,099,916 + +1.5 5,099,916 + +0.8 5,099,916 + -0.2 5,099,916 + -0.1 5,099,916 + -0.4 5,099,916 + +0.3 5,099,917 - -0.4 5,099,917 - +0.0 5,099,917 - +0.6 5,099,917 - +0.7 5,099,917 - -0.8 5,099,917 - -0.0 5,099,917 - +1.0 5,099,917 - +0.2 5,099,917 - +0.2 5,099,917 - +0.7 5,099,917 - -0.1 5,099,917 - +0.8 5,099,917 - +0.5 5,099,917 - -1.1 5,099,917 - +0.1 5,099,918 + +1.7 5,099,918 + +0.2 5,099,918 + +2.9 5,099,918 + -0.4 5,099,953 - -0.4 5,099,997 + +0.3 5,099,997 + +0.7 5,099,997 + +0.5 5,099,998 - -0.4 5,099,998 - +0.5 5,099,998 - +0.4 5,099,998 - -0.6 5,100,039 + +0.4 5,100,081 + IAI46_23950 0.13 +0.3 5,100,081 + IAI46_23950 0.13 +0.5 5,100,160 - IAI46_23950 0.27 -0.4 5,100,236 - IAI46_23950 0.39 -0.2 5,100,581 + +0.0 5,100,581 + +0.6 5,100,581 + +0.8 5,100,582 - -0.0 5,100,594 - +0.1 5,100,594 - +0.4 5,100,594 - +0.4 5,100,600 + +0.3 5,100,646 - -0.5 5,100,667 + +0.0 5,100,667 + +0.4 5,100,669 + +0.0
Or see this region's nucleotide sequence