Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23475 and IAI46_23480 are separated by 9 nucleotides IAI46_23480 and IAI46_23485 are separated by 8 nucleotides IAI46_23485 and IAI46_23490 overlap by 4 nucleotides IAI46_23490 and IAI46_23495 are separated by 401 nucleotides
IAI46_23475: IAI46_23475 - sulfurtransferase complex subunit TusB, at 4,997,170 to 4,997,457
_23475
IAI46_23480: IAI46_23480 - sulfurtransferase complex subunit TusC, at 4,997,467 to 4,997,826
_23480
IAI46_23485: IAI46_23485 - sulfurtransferase complex subunit TusD, at 4,997,835 to 4,998,221
_23485
IAI46_23490: IAI46_23490 - transcriptional regulator, at 4,998,218 to 4,998,946
_23490
IAI46_23495: IAI46_23495 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 4,999,348 to 5,000,181
_23495
Position (kb)
4998
4999 Strain fitness (log2 ratio)
-1
0
1 at 4997.469 kb on - strand at 4998.271 kb on - strand at 4998.271 kb on - strand at 4998.277 kb on - strand at 4998.277 kb on - strand at 4998.277 kb on - strand at 4998.277 kb on - strand at 4998.296 kb on - strand, within IAI46_23490 at 4998.369 kb on - strand, within IAI46_23490 at 4998.401 kb on - strand, within IAI46_23490 at 4998.413 kb on - strand, within IAI46_23490 at 4998.560 kb on - strand, within IAI46_23490 at 4998.560 kb on - strand, within IAI46_23490 at 4998.649 kb on - strand, within IAI46_23490 at 4998.695 kb on - strand, within IAI46_23490 at 4998.695 kb on - strand, within IAI46_23490 at 4998.695 kb on - strand, within IAI46_23490 at 4998.853 kb on - strand, within IAI46_23490 at 4998.930 kb on - strand at 4998.941 kb on - strand at 4998.941 kb on - strand at 4998.954 kb on - strand at 4999.040 kb on + strand at 4999.041 kb on - strand at 4999.061 kb on + strand at 4999.062 kb on - strand at 4999.062 kb on - strand at 4999.119 kb on - strand at 4999.123 kb on - strand at 4999.123 kb on - strand at 4999.153 kb on + strand at 4999.485 kb on + strand, within IAI46_23495 at 4999.610 kb on + strand, within IAI46_23495 at 4999.610 kb on + strand, within IAI46_23495 at 4999.617 kb on + strand, within IAI46_23495 at 4999.617 kb on + strand, within IAI46_23495 at 4999.658 kb on - strand, within IAI46_23495 at 4999.660 kb on + strand, within IAI46_23495 at 4999.660 kb on + strand, within IAI46_23495 at 4999.661 kb on - strand, within IAI46_23495 at 4999.661 kb on - strand, within IAI46_23495 at 4999.709 kb on - strand, within IAI46_23495 at 4999.715 kb on + strand, within IAI46_23495 at 4999.715 kb on + strand, within IAI46_23495 at 4999.716 kb on - strand, within IAI46_23495 at 4999.795 kb on - strand, within IAI46_23495
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 4,997,469 - -1.2 4,998,271 - -1.2 4,998,271 - +0.5 4,998,277 - +0.2 4,998,277 - +0.2 4,998,277 - +0.9 4,998,277 - +1.3 4,998,296 - IAI46_23490 0.11 -0.5 4,998,369 - IAI46_23490 0.21 -0.3 4,998,401 - IAI46_23490 0.25 +0.8 4,998,413 - IAI46_23490 0.27 -0.2 4,998,560 - IAI46_23490 0.47 +0.4 4,998,560 - IAI46_23490 0.47 +0.3 4,998,649 - IAI46_23490 0.59 -0.3 4,998,695 - IAI46_23490 0.65 -1.0 4,998,695 - IAI46_23490 0.65 +0.5 4,998,695 - IAI46_23490 0.65 +0.4 4,998,853 - IAI46_23490 0.87 +1.0 4,998,930 - +0.8 4,998,941 - +0.7 4,998,941 - +0.2 4,998,954 - -0.1 4,999,040 + -1.1 4,999,041 - +1.1 4,999,061 + +0.4 4,999,062 - +0.1 4,999,062 - +0.2 4,999,119 - -0.3 4,999,123 - +0.7 4,999,123 - +1.2 4,999,153 + -0.3 4,999,485 + IAI46_23495 0.16 +0.8 4,999,610 + IAI46_23495 0.31 +0.9 4,999,610 + IAI46_23495 0.31 -0.1 4,999,617 + IAI46_23495 0.32 -0.3 4,999,617 + IAI46_23495 0.32 -0.2 4,999,658 - IAI46_23495 0.37 +1.0 4,999,660 + IAI46_23495 0.37 -1.4 4,999,660 + IAI46_23495 0.37 +0.4 4,999,661 - IAI46_23495 0.38 -0.2 4,999,661 - IAI46_23495 0.38 -0.1 4,999,709 - IAI46_23495 0.43 -0.0 4,999,715 + IAI46_23495 0.44 -1.0 4,999,715 + IAI46_23495 0.44 +0.6 4,999,716 - IAI46_23495 0.44 -0.5 4,999,795 - IAI46_23495 0.54 -1.0
Or see this region's nucleotide sequence