Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19355 and IAI46_19360 are separated by 55 nucleotides IAI46_19360 and IAI46_19365 are separated by 195 nucleotides IAI46_19365 and IAI46_19370 are separated by 119 nucleotides
IAI46_19355: IAI46_19355 - IscS subfamily cysteine desulfurase, at 4,084,071 to 4,085,285
_19355
IAI46_19360: IAI46_19360 - Fe-S cluster assembly transcriptional regulator IscR, at 4,085,341 to 4,085,835
_19360
IAI46_19365: IAI46_19365 - tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ, at 4,086,031 to 4,086,765
_19365
IAI46_19370: IAI46_19370 - inositol-1-monophosphatase, at 4,086,885 to 4,087,688
_19370
Position (kb)
4086
4087 Strain fitness (log2 ratio)
-2
-1
0
1 at 4085.302 kb on - strand at 4085.302 kb on - strand at 4085.302 kb on - strand at 4085.342 kb on + strand at 4085.356 kb on - strand at 4085.356 kb on - strand at 4085.364 kb on + strand at 4085.464 kb on - strand, within IAI46_19360 at 4085.599 kb on - strand, within IAI46_19360 at 4085.702 kb on - strand, within IAI46_19360 at 4085.702 kb on - strand, within IAI46_19360 at 4085.715 kb on - strand, within IAI46_19360 at 4085.728 kb on - strand, within IAI46_19360 at 4085.797 kb on - strand at 4085.797 kb on - strand at 4085.821 kb on - strand at 4085.821 kb on - strand at 4085.821 kb on - strand at 4085.839 kb on + strand at 4085.840 kb on - strand at 4085.840 kb on - strand at 4085.840 kb on - strand at 4085.912 kb on - strand at 4085.946 kb on + strand at 4085.947 kb on - strand at 4085.977 kb on + strand at 4085.991 kb on - strand at 4085.994 kb on + strand at 4085.995 kb on - strand at 4086.000 kb on + strand at 4086.003 kb on + strand at 4086.133 kb on + strand, within IAI46_19365 at 4086.287 kb on + strand, within IAI46_19365 at 4086.288 kb on - strand, within IAI46_19365 at 4086.288 kb on - strand, within IAI46_19365 at 4086.288 kb on - strand, within IAI46_19365 at 4086.305 kb on + strand, within IAI46_19365 at 4086.305 kb on + strand, within IAI46_19365 at 4086.306 kb on - strand, within IAI46_19365 at 4086.306 kb on - strand, within IAI46_19365 at 4086.377 kb on + strand, within IAI46_19365 at 4086.378 kb on - strand, within IAI46_19365 at 4086.583 kb on - strand, within IAI46_19365 at 4086.666 kb on - strand, within IAI46_19365 at 4086.666 kb on - strand, within IAI46_19365 at 4086.756 kb on + strand at 4086.757 kb on - strand at 4086.757 kb on - strand at 4086.765 kb on + strand at 4086.765 kb on + strand at 4086.765 kb on + strand at 4086.765 kb on + strand at 4086.802 kb on - strand at 4086.802 kb on - strand at 4086.812 kb on + strand at 4087.649 kb on + strand at 4087.649 kb on + strand at 4087.699 kb on + strand at 4087.700 kb on - strand at 4087.700 kb on - strand at 4087.713 kb on + strand at 4087.713 kb on + strand at 4087.744 kb on - strand at 4087.752 kb on + strand at 4087.752 kb on + strand at 4087.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 4,085,302 - +0.0 4,085,302 - +0.9 4,085,302 - -0.8 4,085,342 + -0.7 4,085,356 - -0.1 4,085,356 - +0.4 4,085,364 + +1.5 4,085,464 - IAI46_19360 0.25 -0.4 4,085,599 - IAI46_19360 0.52 +0.5 4,085,702 - IAI46_19360 0.73 -0.8 4,085,702 - IAI46_19360 0.73 +1.2 4,085,715 - IAI46_19360 0.76 -0.1 4,085,728 - IAI46_19360 0.78 -0.4 4,085,797 - +0.0 4,085,797 - +0.5 4,085,821 - -0.5 4,085,821 - -0.5 4,085,821 - -2.5 4,085,839 + -0.8 4,085,840 - -0.5 4,085,840 - +0.5 4,085,840 - -0.7 4,085,912 - +0.1 4,085,946 + -0.4 4,085,947 - -0.3 4,085,977 + +0.3 4,085,991 - -0.3 4,085,994 + -0.3 4,085,995 - +1.5 4,086,000 + +0.2 4,086,003 + +0.3 4,086,133 + IAI46_19365 0.14 -0.6 4,086,287 + IAI46_19365 0.35 -0.6 4,086,288 - IAI46_19365 0.35 -0.4 4,086,288 - IAI46_19365 0.35 +0.0 4,086,288 - IAI46_19365 0.35 +0.6 4,086,305 + IAI46_19365 0.37 +0.7 4,086,305 + IAI46_19365 0.37 +1.6 4,086,306 - IAI46_19365 0.37 +0.2 4,086,306 - IAI46_19365 0.37 -0.0 4,086,377 + IAI46_19365 0.47 -0.3 4,086,378 - IAI46_19365 0.47 +0.3 4,086,583 - IAI46_19365 0.75 -0.1 4,086,666 - IAI46_19365 0.86 -0.1 4,086,666 - IAI46_19365 0.86 +0.2 4,086,756 + -0.2 4,086,757 - -0.0 4,086,757 - +0.7 4,086,765 + +0.9 4,086,765 + -1.3 4,086,765 + -0.4 4,086,765 + +0.2 4,086,802 - +0.2 4,086,802 - -0.4 4,086,812 + -0.3 4,087,649 + +0.0 4,087,649 + -1.5 4,087,699 + +0.0 4,087,700 - +0.3 4,087,700 - +0.8 4,087,713 + -1.5 4,087,713 + +1.0 4,087,744 - -0.7 4,087,752 + -0.1 4,087,752 + +0.1 4,087,753 - +0.2
Or see this region's nucleotide sequence