Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18840 and IAI46_18845 are separated by 22 nucleotides IAI46_18845 and IAI46_18850 are separated by 441 nucleotides IAI46_18850 and IAI46_18855 are separated by 16 nucleotides
IAI46_18840: IAI46_18840 - M48 family metallopeptidase, at 3,966,836 to 3,968,305
_18840
IAI46_18845: IAI46_18845 - arsenate reductase (glutaredoxin), at 3,968,328 to 3,968,681
_18845
IAI46_18850: IAI46_18850 - DNA-binding protein, at 3,969,123 to 3,969,662
_18850
IAI46_18855: IAI46_18855 - DnaA inactivator Hda, at 3,969,679 to 3,970,380
_18855
Position (kb)
3968
3969 Strain fitness (log2 ratio)
-1
0
1
2 at 3967.427 kb on - strand, within IAI46_18840 at 3967.457 kb on - strand, within IAI46_18840 at 3967.541 kb on + strand, within IAI46_18840 at 3967.542 kb on - strand, within IAI46_18840 at 3967.688 kb on - strand, within IAI46_18840 at 3967.688 kb on - strand, within IAI46_18840 at 3967.688 kb on - strand, within IAI46_18840 at 3967.691 kb on + strand, within IAI46_18840 at 3967.692 kb on - strand, within IAI46_18840 at 3967.737 kb on - strand, within IAI46_18840 at 3967.748 kb on - strand, within IAI46_18840 at 3967.752 kb on + strand, within IAI46_18840 at 3967.753 kb on - strand, within IAI46_18840 at 3967.753 kb on - strand, within IAI46_18840 at 3967.776 kb on - strand, within IAI46_18840 at 3967.797 kb on - strand, within IAI46_18840 at 3967.797 kb on - strand, within IAI46_18840 at 3967.812 kb on - strand, within IAI46_18840 at 3967.830 kb on + strand, within IAI46_18840 at 3967.986 kb on + strand, within IAI46_18840 at 3967.997 kb on + strand, within IAI46_18840 at 3967.998 kb on - strand, within IAI46_18840 at 3968.240 kb on + strand at 3968.240 kb on + strand at 3968.325 kb on + strand at 3968.342 kb on + strand at 3968.343 kb on - strand at 3968.347 kb on - strand at 3968.503 kb on + strand, within IAI46_18845 at 3968.526 kb on + strand, within IAI46_18845 at 3968.527 kb on - strand, within IAI46_18845 at 3968.527 kb on - strand, within IAI46_18845 at 3968.588 kb on - strand, within IAI46_18845 at 3968.696 kb on + strand at 3968.696 kb on + strand at 3968.709 kb on + strand at 3968.710 kb on - strand at 3968.710 kb on - strand at 3968.710 kb on - strand at 3968.710 kb on - strand at 3968.717 kb on + strand at 3968.790 kb on + strand at 3968.790 kb on + strand at 3968.794 kb on - strand at 3968.794 kb on - strand at 3968.849 kb on - strand at 3968.854 kb on - strand at 3968.896 kb on - strand at 3968.896 kb on - strand at 3968.896 kb on - strand at 3968.905 kb on - strand at 3968.905 kb on - strand at 3968.945 kb on + strand at 3968.945 kb on + strand at 3969.012 kb on + strand at 3969.012 kb on + strand at 3969.012 kb on + strand at 3969.012 kb on + strand at 3969.013 kb on - strand at 3969.013 kb on - strand at 3969.013 kb on - strand at 3969.013 kb on - strand at 3969.013 kb on - strand at 3969.013 kb on - strand at 3969.021 kb on + strand at 3969.021 kb on + strand at 3969.021 kb on + strand at 3969.022 kb on - strand at 3969.122 kb on + strand at 3969.337 kb on + strand, within IAI46_18850 at 3969.337 kb on + strand, within IAI46_18850 at 3969.338 kb on - strand, within IAI46_18850 at 3969.361 kb on + strand, within IAI46_18850 at 3969.367 kb on + strand, within IAI46_18850 at 3969.367 kb on + strand, within IAI46_18850 at 3969.367 kb on + strand, within IAI46_18850 at 3969.367 kb on + strand, within IAI46_18850 at 3969.428 kb on + strand, within IAI46_18850 at 3969.500 kb on + strand, within IAI46_18850 at 3969.501 kb on - strand, within IAI46_18850 at 3969.565 kb on - strand, within IAI46_18850 at 3969.630 kb on + strand at 3969.630 kb on + strand at 3969.630 kb on + strand at 3969.630 kb on + strand at 3969.630 kb on + strand at 3969.631 kb on - strand at 3969.631 kb on - strand at 3969.631 kb on - strand at 3969.631 kb on - strand at 3969.631 kb on - strand at 3969.631 kb on - strand at 3969.631 kb on - strand at 3969.634 kb on + strand at 3969.680 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,967,427 - IAI46_18840 0.40 +0.8 3,967,457 - IAI46_18840 0.42 +0.7 3,967,541 + IAI46_18840 0.48 +1.2 3,967,542 - IAI46_18840 0.48 +0.1 3,967,688 - IAI46_18840 0.58 -0.4 3,967,688 - IAI46_18840 0.58 -0.0 3,967,688 - IAI46_18840 0.58 -0.0 3,967,691 + IAI46_18840 0.58 -0.1 3,967,692 - IAI46_18840 0.58 -0.1 3,967,737 - IAI46_18840 0.61 -0.2 3,967,748 - IAI46_18840 0.62 -0.7 3,967,752 + IAI46_18840 0.62 +0.3 3,967,753 - IAI46_18840 0.62 +0.8 3,967,753 - IAI46_18840 0.62 +0.0 3,967,776 - IAI46_18840 0.64 +1.2 3,967,797 - IAI46_18840 0.65 -0.1 3,967,797 - IAI46_18840 0.65 +0.4 3,967,812 - IAI46_18840 0.66 -0.1 3,967,830 + IAI46_18840 0.68 -1.1 3,967,986 + IAI46_18840 0.78 +0.5 3,967,997 + IAI46_18840 0.79 +0.9 3,967,998 - IAI46_18840 0.79 +0.5 3,968,240 + +1.4 3,968,240 + +1.0 3,968,325 + +0.2 3,968,342 + -0.7 3,968,343 - +1.0 3,968,347 - -0.4 3,968,503 + IAI46_18845 0.49 +1.0 3,968,526 + IAI46_18845 0.56 +0.4 3,968,527 - IAI46_18845 0.56 -0.4 3,968,527 - IAI46_18845 0.56 -0.1 3,968,588 - IAI46_18845 0.73 +0.8 3,968,696 + -0.5 3,968,696 + -0.1 3,968,709 + +0.5 3,968,710 - -0.3 3,968,710 - -0.2 3,968,710 - +0.1 3,968,710 - +0.4 3,968,717 + -1.1 3,968,790 + +1.2 3,968,790 + +0.3 3,968,794 - +1.0 3,968,794 - +0.8 3,968,849 - +0.1 3,968,854 - +0.5 3,968,896 - -0.2 3,968,896 - -0.4 3,968,896 - +0.4 3,968,905 - -0.0 3,968,905 - +0.1 3,968,945 + -0.0 3,968,945 + +0.2 3,969,012 + +0.6 3,969,012 + +2.4 3,969,012 + -0.9 3,969,012 + +0.1 3,969,013 - +1.5 3,969,013 - +0.5 3,969,013 - -1.5 3,969,013 - +0.1 3,969,013 - +0.7 3,969,013 - +0.2 3,969,021 + -0.7 3,969,021 + +0.1 3,969,021 + +0.4 3,969,022 - -0.2 3,969,122 + -0.9 3,969,337 + IAI46_18850 0.40 +0.7 3,969,337 + IAI46_18850 0.40 -0.1 3,969,338 - IAI46_18850 0.40 +0.5 3,969,361 + IAI46_18850 0.44 +0.6 3,969,367 + IAI46_18850 0.45 +1.1 3,969,367 + IAI46_18850 0.45 -0.4 3,969,367 + IAI46_18850 0.45 +1.1 3,969,367 + IAI46_18850 0.45 +0.0 3,969,428 + IAI46_18850 0.56 -0.2 3,969,500 + IAI46_18850 0.70 +0.2 3,969,501 - IAI46_18850 0.70 +0.2 3,969,565 - IAI46_18850 0.82 -0.7 3,969,630 + -0.3 3,969,630 + +1.2 3,969,630 + -0.9 3,969,630 + +1.0 3,969,630 + +0.9 3,969,631 - +0.7 3,969,631 - +0.3 3,969,631 - +1.1 3,969,631 - -0.3 3,969,631 - -0.6 3,969,631 - +0.5 3,969,631 - +0.6 3,969,634 + +0.6 3,969,680 + -0.4
Or see this region's nucleotide sequence