Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17470 and IAI46_17475 are separated by 397 nucleotides IAI46_17475 and IAI46_17480 are separated by 70 nucleotides
IAI46_17470: IAI46_17470 - FadR family transcriptional regulator, at 3,671,913 to 3,672,641
_17470
IAI46_17475: IAI46_17475 - RraA family protein, at 3,673,039 to 3,673,725
_17475
IAI46_17480: IAI46_17480 - MFS transporter, at 3,673,796 to 3,675,100
_17480
Position (kb)
3673
3674 Strain fitness (log2 ratio)
-1
0
1
2 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.139 kb on - strand, within IAI46_17470 at 3672.176 kb on + strand, within IAI46_17470 at 3672.191 kb on + strand, within IAI46_17470 at 3672.192 kb on - strand, within IAI46_17470 at 3672.207 kb on - strand, within IAI46_17470 at 3672.441 kb on + strand, within IAI46_17470 at 3672.571 kb on - strand at 3672.576 kb on - strand at 3672.586 kb on + strand at 3672.587 kb on - strand at 3672.587 kb on - strand at 3672.893 kb on + strand at 3672.910 kb on + strand at 3672.911 kb on - strand at 3672.914 kb on - strand at 3672.918 kb on + strand at 3672.918 kb on + strand at 3672.920 kb on + strand at 3672.920 kb on + strand at 3672.921 kb on - strand at 3672.922 kb on + strand at 3672.922 kb on + strand at 3672.923 kb on - strand at 3673.120 kb on - strand, within IAI46_17475 at 3673.173 kb on + strand, within IAI46_17475 at 3673.174 kb on - strand, within IAI46_17475 at 3673.220 kb on - strand, within IAI46_17475 at 3673.315 kb on + strand, within IAI46_17475 at 3673.315 kb on + strand, within IAI46_17475 at 3673.316 kb on - strand, within IAI46_17475 at 3673.316 kb on - strand, within IAI46_17475 at 3673.316 kb on - strand, within IAI46_17475 at 3673.414 kb on + strand, within IAI46_17475 at 3673.415 kb on - strand, within IAI46_17475 at 3673.418 kb on + strand, within IAI46_17475 at 3673.418 kb on + strand, within IAI46_17475 at 3673.474 kb on + strand, within IAI46_17475 at 3673.474 kb on + strand, within IAI46_17475 at 3673.474 kb on + strand, within IAI46_17475 at 3673.475 kb on - strand, within IAI46_17475 at 3673.547 kb on + strand, within IAI46_17475 at 3673.589 kb on + strand, within IAI46_17475 at 3673.623 kb on + strand, within IAI46_17475 at 3673.623 kb on + strand, within IAI46_17475 at 3673.719 kb on - strand at 3673.887 kb on - strand at 3673.887 kb on - strand at 3673.889 kb on - strand at 3673.890 kb on + strand at 3673.890 kb on + strand at 3673.890 kb on + strand at 3673.890 kb on + strand at 3673.891 kb on - strand at 3673.898 kb on + strand at 3673.903 kb on - strand at 3674.032 kb on + strand, within IAI46_17480 at 3674.033 kb on - strand, within IAI46_17480 at 3674.033 kb on - strand, within IAI46_17480 at 3674.033 kb on - strand, within IAI46_17480 at 3674.033 kb on - strand, within IAI46_17480 at 3674.076 kb on - strand, within IAI46_17480 at 3674.089 kb on + strand, within IAI46_17480 at 3674.095 kb on + strand, within IAI46_17480 at 3674.096 kb on - strand, within IAI46_17480 at 3674.143 kb on + strand, within IAI46_17480 at 3674.143 kb on + strand, within IAI46_17480 at 3674.194 kb on + strand, within IAI46_17480 at 3674.194 kb on + strand, within IAI46_17480 at 3674.261 kb on - strand, within IAI46_17480 at 3674.374 kb on + strand, within IAI46_17480 at 3674.374 kb on + strand, within IAI46_17480 at 3674.520 kb on - strand, within IAI46_17480 at 3674.547 kb on - strand, within IAI46_17480 at 3674.547 kb on - strand, within IAI46_17480 at 3674.547 kb on - strand, within IAI46_17480 at 3674.610 kb on + strand, within IAI46_17480 at 3674.611 kb on - strand, within IAI46_17480 at 3674.657 kb on - strand, within IAI46_17480 at 3674.701 kb on + strand, within IAI46_17480 at 3674.701 kb on + strand, within IAI46_17480
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,672,105 - IAI46_17470 0.26 -0.1 3,672,105 - IAI46_17470 0.26 +0.3 3,672,105 - IAI46_17470 0.26 -1.4 3,672,105 - IAI46_17470 0.26 -0.6 3,672,105 - IAI46_17470 0.26 -0.5 3,672,105 - IAI46_17470 0.26 +0.1 3,672,139 - IAI46_17470 0.31 -0.5 3,672,176 + IAI46_17470 0.36 -0.5 3,672,191 + IAI46_17470 0.38 -0.8 3,672,192 - IAI46_17470 0.38 -1.4 3,672,207 - IAI46_17470 0.40 -0.1 3,672,441 + IAI46_17470 0.72 +1.1 3,672,571 - -0.1 3,672,576 - -1.7 3,672,586 + -0.1 3,672,587 - +0.0 3,672,587 - +0.3 3,672,893 + +0.6 3,672,910 + +0.6 3,672,911 - -0.6 3,672,914 - +0.3 3,672,918 + -1.7 3,672,918 + +0.2 3,672,920 + -0.8 3,672,920 + +0.2 3,672,921 - -0.7 3,672,922 + +0.3 3,672,922 + -0.3 3,672,923 - +1.7 3,673,120 - IAI46_17475 0.12 -0.1 3,673,173 + IAI46_17475 0.20 +1.1 3,673,174 - IAI46_17475 0.20 +0.6 3,673,220 - IAI46_17475 0.26 -0.2 3,673,315 + IAI46_17475 0.40 +0.5 3,673,315 + IAI46_17475 0.40 -0.7 3,673,316 - IAI46_17475 0.40 +0.9 3,673,316 - IAI46_17475 0.40 +0.2 3,673,316 - IAI46_17475 0.40 -0.1 3,673,414 + IAI46_17475 0.55 +0.2 3,673,415 - IAI46_17475 0.55 +0.7 3,673,418 + IAI46_17475 0.55 +0.1 3,673,418 + IAI46_17475 0.55 -0.7 3,673,474 + IAI46_17475 0.63 +0.1 3,673,474 + IAI46_17475 0.63 -0.0 3,673,474 + IAI46_17475 0.63 -0.5 3,673,475 - IAI46_17475 0.63 -1.0 3,673,547 + IAI46_17475 0.74 -0.7 3,673,589 + IAI46_17475 0.80 +0.5 3,673,623 + IAI46_17475 0.85 +0.1 3,673,623 + IAI46_17475 0.85 +0.9 3,673,719 - -0.5 3,673,887 - +1.8 3,673,887 - +0.6 3,673,889 - +1.0 3,673,890 + -0.5 3,673,890 + -0.7 3,673,890 + +0.9 3,673,890 + +0.3 3,673,891 - +0.8 3,673,898 + -0.3 3,673,903 - -0.1 3,674,032 + IAI46_17480 0.18 +0.1 3,674,033 - IAI46_17480 0.18 -0.2 3,674,033 - IAI46_17480 0.18 +0.2 3,674,033 - IAI46_17480 0.18 -0.3 3,674,033 - IAI46_17480 0.18 -0.1 3,674,076 - IAI46_17480 0.21 +0.2 3,674,089 + IAI46_17480 0.22 +0.8 3,674,095 + IAI46_17480 0.23 +0.7 3,674,096 - IAI46_17480 0.23 -0.6 3,674,143 + IAI46_17480 0.27 -1.1 3,674,143 + IAI46_17480 0.27 +0.8 3,674,194 + IAI46_17480 0.30 +0.4 3,674,194 + IAI46_17480 0.30 +0.9 3,674,261 - IAI46_17480 0.36 +1.3 3,674,374 + IAI46_17480 0.44 +0.6 3,674,374 + IAI46_17480 0.44 +1.8 3,674,520 - IAI46_17480 0.55 -0.2 3,674,547 - IAI46_17480 0.58 +1.0 3,674,547 - IAI46_17480 0.58 -1.4 3,674,547 - IAI46_17480 0.58 +0.5 3,674,610 + IAI46_17480 0.62 -0.2 3,674,611 - IAI46_17480 0.62 +0.1 3,674,657 - IAI46_17480 0.66 +0.1 3,674,701 + IAI46_17480 0.69 +0.6 3,674,701 + IAI46_17480 0.69 -0.1
Or see this region's nucleotide sequence