Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16040 and IAI46_16045 are separated by 4 nucleotides IAI46_16045 and IAI46_16050 overlap by 4 nucleotides IAI46_16050 and IAI46_16055 are separated by 158 nucleotides IAI46_16055 and IAI46_16060 overlap by 1 nucleotides
IAI46_16040: IAI46_16040 - chemotaxis protein CheA, at 3,364,238 to 3,366,211
_16040
IAI46_16045: IAI46_16045 - flagellar motor protein MotB, at 3,366,216 to 3,367,181
_16045
IAI46_16050: IAI46_16050 - flagellar motor stator protein MotA, at 3,367,178 to 3,368,068
_16050
IAI46_16055: IAI46_16055 - flagellar transcriptional regulator FlhC, at 3,368,227 to 3,368,811
_16055
IAI46_16060: IAI46_16060 - flagellar transcriptional regulator FlhD, at 3,368,811 to 3,369,161
_16060
Position (kb)
3367
3368
3369 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3366.187 kb on - strand at 3366.196 kb on + strand at 3366.196 kb on + strand at 3366.196 kb on + strand at 3366.200 kb on - strand at 3366.569 kb on - strand, within IAI46_16045 at 3366.596 kb on + strand, within IAI46_16045 at 3366.680 kb on - strand, within IAI46_16045 at 3366.680 kb on - strand, within IAI46_16045 at 3366.680 kb on - strand, within IAI46_16045 at 3366.688 kb on - strand, within IAI46_16045 at 3367.096 kb on + strand at 3367.272 kb on + strand, within IAI46_16050 at 3367.412 kb on - strand, within IAI46_16050 at 3367.420 kb on - strand, within IAI46_16050 at 3367.683 kb on + strand, within IAI46_16050 at 3367.693 kb on + strand, within IAI46_16050 at 3367.693 kb on + strand, within IAI46_16050 at 3367.762 kb on + strand, within IAI46_16050 at 3367.907 kb on + strand, within IAI46_16050 at 3367.983 kb on + strand at 3368.040 kb on - strand at 3368.063 kb on + strand at 3368.063 kb on + strand at 3368.118 kb on + strand at 3368.206 kb on + strand at 3368.269 kb on - strand at 3368.269 kb on - strand at 3368.272 kb on - strand at 3368.296 kb on - strand, within IAI46_16055 at 3368.330 kb on - strand, within IAI46_16055 at 3368.505 kb on - strand, within IAI46_16055 at 3368.520 kb on + strand, within IAI46_16055 at 3368.579 kb on + strand, within IAI46_16055 at 3368.669 kb on - strand, within IAI46_16055 at 3368.678 kb on + strand, within IAI46_16055 at 3368.678 kb on + strand, within IAI46_16055 at 3368.679 kb on - strand, within IAI46_16055 at 3368.749 kb on - strand, within IAI46_16055 at 3368.749 kb on - strand, within IAI46_16055 at 3368.793 kb on + strand at 3368.863 kb on - strand, within IAI46_16060 at 3368.954 kb on + strand, within IAI46_16060
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,366,187 - -0.4 3,366,196 + +0.8 3,366,196 + -1.4 3,366,196 + -0.2 3,366,200 - +0.7 3,366,569 - IAI46_16045 0.37 +0.4 3,366,596 + IAI46_16045 0.39 -1.4 3,366,680 - IAI46_16045 0.48 -0.3 3,366,680 - IAI46_16045 0.48 -0.2 3,366,680 - IAI46_16045 0.48 -1.0 3,366,688 - IAI46_16045 0.49 -0.9 3,367,096 + +0.6 3,367,272 + IAI46_16050 0.11 +0.8 3,367,412 - IAI46_16050 0.26 +0.8 3,367,420 - IAI46_16050 0.27 +0.8 3,367,683 + IAI46_16050 0.57 -0.4 3,367,693 + IAI46_16050 0.58 -0.1 3,367,693 + IAI46_16050 0.58 -0.2 3,367,762 + IAI46_16050 0.66 +0.5 3,367,907 + IAI46_16050 0.82 -1.4 3,367,983 + +1.4 3,368,040 - -0.0 3,368,063 + +1.4 3,368,063 + -0.1 3,368,118 + +1.3 3,368,206 + -0.3 3,368,269 - -0.0 3,368,269 - +1.3 3,368,272 - +0.6 3,368,296 - IAI46_16055 0.12 -0.3 3,368,330 - IAI46_16055 0.18 -3.0 3,368,505 - IAI46_16055 0.48 -0.8 3,368,520 + IAI46_16055 0.50 +1.0 3,368,579 + IAI46_16055 0.60 -1.0 3,368,669 - IAI46_16055 0.76 +0.1 3,368,678 + IAI46_16055 0.77 +1.8 3,368,678 + IAI46_16055 0.77 -0.1 3,368,679 - IAI46_16055 0.77 -0.0 3,368,749 - IAI46_16055 0.89 +0.0 3,368,749 - IAI46_16055 0.89 +0.8 3,368,793 + +0.2 3,368,863 - IAI46_16060 0.15 +0.6 3,368,954 + IAI46_16060 0.41 +0.1
Or see this region's nucleotide sequence