Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15240 and IAI46_15245 are separated by 874 nucleotides IAI46_15245 and IAI46_15250 are separated by 9 nucleotides IAI46_15250 and IAI46_15255 overlap by 4 nucleotides IAI46_15255 and IAI46_15260 are separated by 1 nucleotides
IAI46_15240: IAI46_15240 - single-stranded DNA-binding protein, at 3,194,157 to 3,194,627
_15240
IAI46_15245: IAI46_15245 - hypothetical protein, at 3,195,502 to 3,196,341
_15245
IAI46_15250: IAI46_15250 - hypothetical protein, at 3,196,351 to 3,196,872
_15250
IAI46_15255: IAI46_15255 - Lar family restriction alleviation protein, at 3,196,869 to 3,197,174
_15255
IAI46_15260: IAI46_15260 - hypothetical protein, at 3,197,176 to 3,197,541
_15260
Position (kb)
3195
3196
3197 Strain fitness (log2 ratio)
-1
0
1
2 at 3194.551 kb on + strand, within IAI46_15240 at 3194.567 kb on + strand, within IAI46_15240 at 3194.568 kb on - strand, within IAI46_15240 at 3194.616 kb on - strand at 3194.617 kb on + strand at 3194.625 kb on + strand at 3194.625 kb on + strand at 3194.626 kb on - strand at 3194.650 kb on + strand at 3194.650 kb on + strand at 3194.651 kb on - strand at 3194.651 kb on - strand at 3194.654 kb on + strand at 3194.655 kb on - strand at 3194.655 kb on - strand at 3194.680 kb on + strand at 3194.720 kb on + strand at 3194.720 kb on + strand at 3194.759 kb on + strand at 3194.760 kb on - strand at 3194.802 kb on + strand at 3194.803 kb on - strand at 3194.855 kb on + strand at 3194.893 kb on + strand at 3194.893 kb on + strand at 3195.002 kb on - strand at 3195.002 kb on - strand at 3195.061 kb on + strand at 3195.098 kb on - strand at 3195.121 kb on + strand at 3195.121 kb on + strand at 3195.121 kb on + strand at 3195.121 kb on + strand at 3195.121 kb on + strand at 3195.122 kb on - strand at 3195.122 kb on - strand at 3195.123 kb on + strand at 3195.124 kb on - strand at 3195.334 kb on + strand at 3195.691 kb on + strand, within IAI46_15245 at 3195.691 kb on + strand, within IAI46_15245 at 3195.692 kb on - strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.697 kb on + strand, within IAI46_15245 at 3195.698 kb on - strand, within IAI46_15245 at 3195.698 kb on - strand, within IAI46_15245 at 3195.698 kb on - strand, within IAI46_15245 at 3195.703 kb on + strand, within IAI46_15245 at 3195.704 kb on - strand, within IAI46_15245 at 3195.704 kb on - strand, within IAI46_15245 at 3195.710 kb on + strand, within IAI46_15245 at 3195.711 kb on - strand, within IAI46_15245 at 3195.724 kb on + strand, within IAI46_15245 at 3195.817 kb on - strand, within IAI46_15245 at 3195.841 kb on - strand, within IAI46_15245 at 3195.859 kb on - strand, within IAI46_15245 at 3195.988 kb on - strand, within IAI46_15245 at 3196.001 kb on - strand, within IAI46_15245 at 3196.071 kb on - strand, within IAI46_15245 at 3196.085 kb on - strand, within IAI46_15245 at 3196.085 kb on - strand, within IAI46_15245 at 3196.183 kb on + strand, within IAI46_15245 at 3196.290 kb on + strand at 3196.291 kb on - strand at 3196.339 kb on + strand at 3196.375 kb on + strand at 3196.439 kb on - strand, within IAI46_15250 at 3196.549 kb on + strand, within IAI46_15250 at 3196.814 kb on - strand, within IAI46_15250 at 3196.904 kb on + strand, within IAI46_15255 at 3196.956 kb on + strand, within IAI46_15255 at 3196.989 kb on + strand, within IAI46_15255 at 3196.989 kb on + strand, within IAI46_15255 at 3196.989 kb on + strand, within IAI46_15255 at 3196.989 kb on + strand, within IAI46_15255 at 3196.990 kb on - strand, within IAI46_15255 at 3197.054 kb on + strand, within IAI46_15255 at 3197.112 kb on - strand, within IAI46_15255 at 3197.172 kb on + strand at 3197.271 kb on + strand, within IAI46_15260 at 3197.271 kb on + strand, within IAI46_15260 at 3197.271 kb on + strand, within IAI46_15260 at 3197.271 kb on + strand, within IAI46_15260 at 3197.271 kb on + strand, within IAI46_15260 at 3197.271 kb on + strand, within IAI46_15260 at 3197.272 kb on - strand, within IAI46_15260 at 3197.272 kb on - strand, within IAI46_15260 at 3197.272 kb on - strand, within IAI46_15260 at 3197.273 kb on + strand, within IAI46_15260 at 3197.273 kb on + strand, within IAI46_15260 at 3197.274 kb on - strand, within IAI46_15260 at 3197.274 kb on - strand, within IAI46_15260 at 3197.274 kb on - strand, within IAI46_15260
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,194,551 + IAI46_15240 0.84 +0.4 3,194,567 + IAI46_15240 0.87 +0.4 3,194,568 - IAI46_15240 0.87 +0.5 3,194,616 - +0.7 3,194,617 + +0.7 3,194,625 + +1.7 3,194,625 + +1.2 3,194,626 - +0.3 3,194,650 + +0.1 3,194,650 + +1.0 3,194,651 - +0.8 3,194,651 - +1.1 3,194,654 + -0.0 3,194,655 - +0.6 3,194,655 - +1.2 3,194,680 + +1.1 3,194,720 + +1.0 3,194,720 + +1.0 3,194,759 + +1.0 3,194,760 - +0.7 3,194,802 + +0.5 3,194,803 - +0.1 3,194,855 + +1.2 3,194,893 + +0.5 3,194,893 + +0.1 3,195,002 - +0.5 3,195,002 - -0.0 3,195,061 + -0.2 3,195,098 - +0.3 3,195,121 + +0.9 3,195,121 + +1.0 3,195,121 + +0.1 3,195,121 + -1.0 3,195,121 + +0.3 3,195,122 - +1.0 3,195,122 - -0.5 3,195,123 + +1.1 3,195,124 - +0.5 3,195,334 + +0.7 3,195,691 + IAI46_15245 0.23 -0.1 3,195,691 + IAI46_15245 0.23 +0.1 3,195,692 - IAI46_15245 0.23 -0.3 3,195,697 + IAI46_15245 0.23 +0.3 3,195,697 + IAI46_15245 0.23 +0.3 3,195,697 + IAI46_15245 0.23 +0.9 3,195,697 + IAI46_15245 0.23 +1.2 3,195,697 + IAI46_15245 0.23 +2.2 3,195,697 + IAI46_15245 0.23 +0.7 3,195,697 + IAI46_15245 0.23 +1.0 3,195,697 + IAI46_15245 0.23 +1.0 3,195,698 - IAI46_15245 0.23 +0.7 3,195,698 - IAI46_15245 0.23 +1.0 3,195,698 - IAI46_15245 0.23 +2.2 3,195,703 + IAI46_15245 0.24 +1.7 3,195,704 - IAI46_15245 0.24 +2.1 3,195,704 - IAI46_15245 0.24 +0.3 3,195,710 + IAI46_15245 0.25 -0.0 3,195,711 - IAI46_15245 0.25 -0.3 3,195,724 + IAI46_15245 0.26 +1.2 3,195,817 - IAI46_15245 0.38 +1.0 3,195,841 - IAI46_15245 0.40 +0.2 3,195,859 - IAI46_15245 0.42 +0.8 3,195,988 - IAI46_15245 0.58 +0.9 3,196,001 - IAI46_15245 0.59 -0.2 3,196,071 - IAI46_15245 0.68 +0.6 3,196,085 - IAI46_15245 0.69 +1.3 3,196,085 - IAI46_15245 0.69 +1.7 3,196,183 + IAI46_15245 0.81 +0.5 3,196,290 + +1.2 3,196,291 - -0.9 3,196,339 + +0.8 3,196,375 + +0.6 3,196,439 - IAI46_15250 0.17 +0.7 3,196,549 + IAI46_15250 0.38 +0.6 3,196,814 - IAI46_15250 0.89 +0.2 3,196,904 + IAI46_15255 0.11 +0.7 3,196,956 + IAI46_15255 0.28 -0.6 3,196,989 + IAI46_15255 0.39 +1.2 3,196,989 + IAI46_15255 0.39 +0.2 3,196,989 + IAI46_15255 0.39 +1.2 3,196,989 + IAI46_15255 0.39 +0.6 3,196,990 - IAI46_15255 0.40 +1.5 3,197,054 + IAI46_15255 0.60 +0.6 3,197,112 - IAI46_15255 0.79 +0.9 3,197,172 + +1.6 3,197,271 + IAI46_15260 0.26 +0.1 3,197,271 + IAI46_15260 0.26 +2.0 3,197,271 + IAI46_15260 0.26 +0.6 3,197,271 + IAI46_15260 0.26 +0.3 3,197,271 + IAI46_15260 0.26 +2.2 3,197,271 + IAI46_15260 0.26 +0.6 3,197,272 - IAI46_15260 0.26 +0.0 3,197,272 - IAI46_15260 0.26 +0.8 3,197,272 - IAI46_15260 0.26 +1.0 3,197,273 + IAI46_15260 0.27 +0.8 3,197,273 + IAI46_15260 0.27 +0.8 3,197,274 - IAI46_15260 0.27 +0.7 3,197,274 - IAI46_15260 0.27 +0.7 3,197,274 - IAI46_15260 0.27 +0.2
Or see this region's nucleotide sequence